RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
COMMD9-207ENST00000533308 MINK1Q8N4C8 1332 aaPredicted RBP11.21□□□□□ -0.61
COMMD9-207ENST00000533308 CERKQ8TCT0 537 aa11.21□□□□□ -0.61
COMMD9-207ENST00000533308 HIRIP3Q9BW71 556 aaPredicted RBP11.21□□□□□ -0.61
COMMD9-207ENST00000533308 IQSEC2Q5JU85 1478 aa11.2□□□□□ -0.62
COMMD9-207ENST00000533308 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
COMMD9-207ENST00000533308 CENPJQ9HC77 1338 aaPredicted RBP11.2□□□□□ -0.62
COMMD9-207ENST00000533308 C14orf37Q86TY3 774 aa11.2□□□□□ -0.62
COMMD9-207ENST00000533308 POGKQ9P215 609 aa11.2□□□□□ -0.62
COMMD9-207ENST00000533308 MSH6P52701 1360 aa11.19□□□□□ -0.62
COMMD9-207ENST00000533308 SIRT1Q96EB6 747 aa11.19□□□□□ -0.62
COMMD9-207ENST00000533308 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
COMMD9-207ENST00000533308 MST1RQ04912 1400 aa11.18□□□□□ -0.62
COMMD9-207ENST00000533308 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
COMMD9-207ENST00000533308 DCCP43146 1447 aa11.18□□□□□ -0.62
COMMD9-207ENST00000533308 ROBO1Q9Y6N7 1651 aa11.17□□□□□ -0.62
COMMD9-207ENST00000533308 ST20-MTHFSA0A0A6YYL1 179 aa11.17□□□□□ -0.62
COMMD9-207ENST00000533308 NUTM2FA1L443 756 aa11.17□□□□□ -0.62
COMMD9-207ENST00000533308 HSPA5P11021 654 aaKnown RBP11.17□□□□□ -0.62
COMMD9-207ENST00000533308 ATP7BP35670 1465 aa11.17□□□□□ -0.62
COMMD9-207ENST00000533308 DISP3Q9P2K9 1392 aa11.16□□□□□ -0.62
COMMD9-207ENST00000533308 TESK2Q96S53 571 aa11.16□□□□□ -0.62
COMMD9-207ENST00000533308 ITSN1Q15811 1721 aa11.15□□□□□ -0.62
COMMD9-207ENST00000533308 PRR36Q9H6K5 1346 aa11.15□□□□□ -0.62
COMMD9-207ENST00000533308 MYOM1P52179 1685 aa11.15□□□□□ -0.62
COMMD9-207ENST00000533308 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.62
COMMD9-207ENST00000533308 SBNO2Q9Y2G9 1366 aa11.15□□□□□ -0.63
COMMD9-207ENST00000533308 C1orf167Q5SNV9 1468 aa11.14□□□□□ -0.63
COMMD9-207ENST00000533308 NHSL1Q5SYE7 1610 aa11.13□□□□□ -0.63
COMMD9-207ENST00000533308 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
COMMD9-207ENST00000533308 WASLO00401 505 aaPredicted RBP11.13□□□□□ -0.63
COMMD9-207ENST00000533308 ZEB1P37275 1124 aaPredicted RBP11.13□□□□□ -0.63
COMMD9-207ENST00000533308 EIF4G2P78344 907 aaKnown RBP eCLIP11.13□□□□□ -0.63
COMMD9-207ENST00000533308 KIF1AQ12756 1690 aa11.12□□□□□ -0.63
COMMD9-207ENST00000533308 ATF3P18847 181 aa11.12□□□□□ -0.63
COMMD9-207ENST00000533308 CDK19Q9BWU1 502 aa11.12□□□□□ -0.63
COMMD9-207ENST00000533308 CABP2Q9NPB3 220 aa11.12□□□□□ -0.63
COMMD9-207ENST00000533308 ANKARQ7Z5J8 1434 aa11.11□□□□□ -0.63
COMMD9-207ENST00000533308 PIP4K2BP78356 416 aa11.11□□□□□ -0.63
COMMD9-207ENST00000533308 CADPS2Q86UW7 1296 aa11.11□□□□□ -0.63
COMMD9-207ENST00000533308 C11orf95C9JLR9 678 aaPredicted RBP11.1□□□□□ -0.63
COMMD9-207ENST00000533308 ORAI2Q96SN7 254 aa11.1□□□□□ -0.63
COMMD9-207ENST00000533308 AKAP12Q02952 1782 aa11.1□□□□□ -0.63
COMMD9-207ENST00000533308 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
COMMD9-207ENST00000533308 SRPK2P78362 688 aaKnown RBP11.09□□□□□ -0.63
COMMD9-207ENST00000533308 BRINP3Q76B58 766 aa11.09□□□□□ -0.63
COMMD9-207ENST00000533308 DDX17Q92841 729 aaKnown RBP11.09□□□□□ -0.63
COMMD9-207ENST00000533308 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
COMMD9-207ENST00000533308 PHLPP1O60346 1717 aa11.09□□□□□ -0.63
COMMD9-207ENST00000533308 COL16A1Q07092 1604 aaPredicted RBP11.09□□□□□ -0.63
COMMD9-207ENST00000533308 AHDC1Q5TGY3 1603 aaPredicted RBP11.09□□□□□ -0.63
COMMD9-207ENST00000533308 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
COMMD9-207ENST00000533308 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
COMMD9-207ENST00000533308 NRKQ7Z2Y5 1582 aa11.08□□□□□ -0.64
COMMD9-207ENST00000533308 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
COMMD9-207ENST00000533308 MON2Q7Z3U7 1717 aa11.08□□□□□ -0.64
COMMD9-207ENST00000533308 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
COMMD9-207ENST00000533308 CD163L1Q9NR16 1453 aa11.07□□□□□ -0.64
COMMD9-207ENST00000533308 TOM1O60784 492 aa11.07□□□□□ -0.64
COMMD9-207ENST00000533308 ESCO1Q5FWF5 840 aa11.07□□□□□ -0.64
COMMD9-207ENST00000533308 PXDNQ92626 1479 aa11.06□□□□□ -0.64
COMMD9-207ENST00000533308 TMF1P82094 1093 aa11.06□□□□□ -0.64
COMMD9-207ENST00000533308 PMFBP1Q8TBY8 1022 aa11.06□□□□□ -0.64
COMMD9-207ENST00000533308 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
COMMD9-207ENST00000533308 POLR3GLQ9BT43 218 aa11.05□□□□□ -0.64
COMMD9-207ENST00000533308 KIF7Q2M1P5 1343 aa11.05□□□□□ -0.64
COMMD9-207ENST00000533308 ATAD2Q6PL18 1390 aa11.04□□□□□ -0.64
COMMD9-207ENST00000533308 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
COMMD9-207ENST00000533308 CABP1Q9NZU7 370 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 CCDC61Q9Y6R9 512 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 ALS2Q96Q42 1657 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 MARF1Q9Y4F3 1742 aaKnown RBP11.03□□□□□ -0.64
COMMD9-207ENST00000533308 WASHC2AQ641Q2 1341 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 A0A1W2PP64 1363 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
COMMD9-207ENST00000533308 CCDC7Q96M83 1385 aa11.03□□□□□ -0.64
COMMD9-207ENST00000533308 PIK3C2AO00443 1686 aa11.02□□□□□ -0.64
COMMD9-207ENST00000533308 ABCA3Q99758 1704 aa11.02□□□□□ -0.65
COMMD9-207ENST00000533308 FOXO3O43524 673 aa11.02□□□□□ -0.65
COMMD9-207ENST00000533308 FBXO41Q8TF61 875 aa11.02□□□□□ -0.65
COMMD9-207ENST00000533308 SLC12A5Q9H2X9 1139 aa11.02□□□□□ -0.65
COMMD9-207ENST00000533308 ACEP12821 1306 aa11.02□□□□□ -0.65
COMMD9-207ENST00000533308 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
COMMD9-207ENST00000533308 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
COMMD9-207ENST00000533308 HSPA1LP34931 641 aa11.01□□□□□ -0.65
COMMD9-207ENST00000533308 TMC1Q8TDI8 760 aa11.01□□□□□ -0.65
COMMD9-207ENST00000533308 USP6P35125 1406 aa11.01□□□□□ -0.65
COMMD9-207ENST00000533308 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
COMMD9-207ENST00000533308 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
COMMD9-207ENST00000533308 SHPRHQ149N8 1683 aa11□□□□□ -0.65
COMMD9-207ENST00000533308 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
COMMD9-207ENST00000533308 SOS2Q07890 1332 aaPredicted RBP10.99□□□□□ -0.65
COMMD9-207ENST00000533308 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
COMMD9-207ENST00000533308 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
COMMD9-207ENST00000533308 TNS3Q68CZ2 1445 aa10.99□□□□□ -0.65
COMMD9-207ENST00000533308 SSH2Q76I76 1423 aa10.99□□□□□ -0.65
COMMD9-207ENST00000533308 PHRF1Q9P1Y6 1649 aaKnown RBP10.98□□□□□ -0.65
COMMD9-207ENST00000533308 PUS7Q96PZ0 661 aaKnown RBP10.98□□□□□ -0.65
COMMD9-207ENST00000533308 NINLQ9Y2I6 1382 aa10.98□□□□□ -0.65
COMMD9-207ENST00000533308 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms