RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 ZFYVE9O95405 1425 aa20.14■□□□□ 0.82
CACNA1E-208ENST00000533229 STK26Q9P289 416 aa20.14■□□□□ 0.81
CACNA1E-208ENST00000533229 PUS7Q96PZ0 661 aaKnown RBP20.14■□□□□ 0.81
CACNA1E-208ENST00000533229 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
CACNA1E-208ENST00000533229 ARHGEF28Q8N1W1 1705 aaKnown RBP20.12■□□□□ 0.81
CACNA1E-208ENST00000533229 ANKRD36BQ8N2N9 1353 aa20.11■□□□□ 0.81
CACNA1E-208ENST00000533229 MTHFSP49914 203 aa20.11■□□□□ 0.81
CACNA1E-208ENST00000533229 SKAP1Q86WV1 359 aa20.11■□□□□ 0.81
CACNA1E-208ENST00000533229 E9PSI1 815 aa20.09■□□□□ 0.81
CACNA1E-208ENST00000533229 TCERG1O14776 1098 aaKnown RBP20.09■□□□□ 0.81
CACNA1E-208ENST00000533229 TMEM131LA2VDJ0 1609 aa20.09■□□□□ 0.81
CACNA1E-208ENST00000533229 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
CACNA1E-208ENST00000533229 NKTRP30414 1462 aaKnown RBP20.09■□□□□ 0.81
CACNA1E-208ENST00000533229 PREX1Q8TCU6 1659 aa20.08■□□□□ 0.81
CACNA1E-208ENST00000533229 BCAR3O75815 825 aa20.08■□□□□ 0.8
CACNA1E-208ENST00000533229 NGEFQ8N5V2 710 aa20.06■□□□□ 0.8
CACNA1E-208ENST00000533229 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
CACNA1E-208ENST00000533229 ERICH6Q7L0X2 663 aa20.06■□□□□ 0.8
CACNA1E-208ENST00000533229 DIP2BQ9P265 1576 aa20.06■□□□□ 0.8
CACNA1E-208ENST00000533229 USP32Q8NFA0 1604 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 SRPK2P78362 688 aaKnown RBP20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 NEUROD2Q15784 382 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 PRAM1Q96QH2 718 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 RRP7AQ9Y3A4 280 aaKnown RBP20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 PTPRMP28827 1452 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 KDM2BQ8NHM5 1336 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 RIMBP3CA6NJZ7 1639 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 RIMBP3BA6NNM3 1639 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 RIMBP3Q9UFD9 1639 aa20.05■□□□□ 0.8
CACNA1E-208ENST00000533229 MYO5BQ9ULV0 1848 aa20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 A0A1W2PP64 1363 aa20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 MINK1Q8N4C8 1332 aaPredicted RBP20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 PDE4AP27815 886 aa20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
CACNA1E-208ENST00000533229 TCP11L2Q8N4U5 519 aa20.03■□□□□ 0.8
CACNA1E-208ENST00000533229 YTHDC2Q9H6S0 1430 aaKnown RBP20.03■□□□□ 0.8
CACNA1E-208ENST00000533229 PAK3O75914 559 aaPredicted RBP20.02■□□□□ 0.8
CACNA1E-208ENST00000533229 MS4A1P11836 297 aa20.02■□□□□ 0.79
CACNA1E-208ENST00000533229 NSD2O96028 1365 aa20.01■□□□□ 0.79
CACNA1E-208ENST00000533229 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
CACNA1E-208ENST00000533229 BACH2Q9BYV9 841 aa20.01■□□□□ 0.79
CACNA1E-208ENST00000533229 POGKQ9P215 609 aa20■□□□□ 0.79
CACNA1E-208ENST00000533229 STAG3Q9UJ98 1225 aa20■□□□□ 0.79
CACNA1E-208ENST00000533229 ABCC11Q96J66 1382 aa20■□□□□ 0.79
CACNA1E-208ENST00000533229 IQSEC2Q5JU85 1478 aa20■□□□□ 0.79
CACNA1E-208ENST00000533229 ANP32AP39687 249 aaKnown RBP20■□□□□ 0.79
CACNA1E-208ENST00000533229 CFAP53Q96M91 514 aa20■□□□□ 0.79
CACNA1E-208ENST00000533229 IPO9Q96P70 1041 aaKnown RBP20■□□□□ 0.79
CACNA1E-208ENST00000533229 NOP58Q9Y2X3 529 aaKnown RBP20■□□□□ 0.79
CACNA1E-208ENST00000533229 GGNBP2Q9H3C7 697 aa19.99■□□□□ 0.79
CACNA1E-208ENST00000533229 ALKQ9UM73 1620 aa19.97■□□□□ 0.79
CACNA1E-208ENST00000533229 MLECQ14165 292 aa19.97■□□□□ 0.79
CACNA1E-208ENST00000533229 NINLQ9Y2I6 1382 aa19.97■□□□□ 0.79
CACNA1E-208ENST00000533229 CD163L1Q9NR16 1453 aa19.97■□□□□ 0.79
CACNA1E-208ENST00000533229 TSPOAP1O95153 1857 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 FYB1O15117 783 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 CENPQQ7L2Z9 268 aaPredicted RBP19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 PPP6R1Q9UPN7 881 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 AGLP35573 1532 aa19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 U2AF1L5P0DN76 240 aaPredicted RBP19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 U2AF1Q01081 240 aaKnown RBP eCLIP19.96■□□□□ 0.79
CACNA1E-208ENST00000533229 CDK19Q9BWU1 502 aa19.95■□□□□ 0.78
CACNA1E-208ENST00000533229 REREQ9P2R6 1566 aa19.94■□□□□ 0.78
CACNA1E-208ENST00000533229 NPM2Q86SE8 214 aaKnown RBP19.94■□□□□ 0.78
CACNA1E-208ENST00000533229 A2ML1A8K2U0 1454 aa19.94■□□□□ 0.78
CACNA1E-208ENST00000533229 CCDC27Q2M243 656 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 WDR63Q8IWG1 891 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 TERF2IPQ9NYB0 399 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 WAPLQ7Z5K2 1190 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 CABP1Q9NZU7 370 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 ARHGEF40Q8TER5 1519 aa19.93■□□□□ 0.78
CACNA1E-208ENST00000533229 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
CACNA1E-208ENST00000533229 RARSP54136 660 aaKnown RBP19.91■□□□□ 0.78
CACNA1E-208ENST00000533229 CLTCQ00610 1675 aaKnown RBP19.9■□□□□ 0.78
CACNA1E-208ENST00000533229 PDE3AQ14432 1141 aa19.9■□□□□ 0.78
CACNA1E-208ENST00000533229 SPATA31D1Q6ZQQ2 1576 aa19.9■□□□□ 0.78
CACNA1E-208ENST00000533229 PANK1Q8TE04 598 aa19.9■□□□□ 0.78
CACNA1E-208ENST00000533229 PLEKHF1Q96S99 279 aa19.89■□□□□ 0.77
CACNA1E-208ENST00000533229 RIMS2Q9UQ26 1411 aa19.89■□□□□ 0.77
CACNA1E-208ENST00000533229 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
CACNA1E-208ENST00000533229 U2SURPO15042 1029 aaKnown RBP19.88■□□□□ 0.77
CACNA1E-208ENST00000533229 FRAT1Q92837 279 aaPredicted RBP19.88■□□□□ 0.77
CACNA1E-208ENST00000533229 COG6Q9Y2V7 657 aa19.88■□□□□ 0.77
CACNA1E-208ENST00000533229 COL3A1P02461 1466 aaPredicted RBP19.87■□□□□ 0.77
CACNA1E-208ENST00000533229 IGHDP01880 384 aa19.87■□□□□ 0.77
CACNA1E-208ENST00000533229 HDGFL2Q7Z4V5 671 aaPredicted RBP19.87■□□□□ 0.77
CACNA1E-208ENST00000533229 NCBP3Q53F19 620 aaKnown RBP19.87■□□□□ 0.77
CACNA1E-208ENST00000533229 MED14O60244 1454 aa19.86■□□□□ 0.77
CACNA1E-208ENST00000533229 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
CACNA1E-208ENST00000533229 BCL2L13Q9BXK5 485 aa19.85■□□□□ 0.77
CACNA1E-208ENST00000533229 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
CACNA1E-208ENST00000533229 FBLN1P23142 703 aa19.84■□□□□ 0.77
CACNA1E-208ENST00000533229 ADGRB2O60241 1585 aa19.84■□□□□ 0.77
CACNA1E-208ENST00000533229 RLBP1P12271 317 aa19.83■□□□□ 0.77
CACNA1E-208ENST00000533229 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.83■□□□□ 0.77
CACNA1E-208ENST00000533229 ZMYM3Q14202 1370 aa19.83■□□□□ 0.76
CACNA1E-208ENST00000533229 TMPOP42166 694 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms