RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	ZNF326	Q5BKZ1	582 aa	Known RBP	14.57	□□□□□ -0.08
PPFIA1-223	ENST00000532793	SLAIN2	Q9P270	581 aa		14.57	□□□□□ -0.08
PPFIA1-223	ENST00000532793	NCOA3	Q9Y6Q9	1424 aa		14.57	□□□□□ -0.08
PPFIA1-223	ENST00000532793	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	14.55	□□□□□ -0.08
PPFIA1-223	ENST00000532793	GALR2	O43603	387 aa	Predicted RBP	14.55	□□□□□ -0.08
PPFIA1-223	ENST00000532793	ADAMTS13	Q76LX8	1427 aa		14.55	□□□□□ -0.08
PPFIA1-223	ENST00000532793	ATF3	P18847	181 aa		14.54	□□□□□ -0.08
PPFIA1-223	ENST00000532793	RRBP1	Q9P2E9	1410 aa	Known RBP	14.54	□□□□□ -0.08
PPFIA1-223	ENST00000532793	CADPS2	Q86UW7	1296 aa		14.53	□□□□□ -0.08
PPFIA1-223	ENST00000532793	CLTCL1	P53675	1640 aa		14.52	□□□□□ -0.08
PPFIA1-223	ENST00000532793	SETBP1	Q9Y6X0	1596 aa		14.52	□□□□□ -0.08
PPFIA1-223	ENST00000532793	C19orf44	Q9H6X5	657 aa		14.52	□□□□□ -0.09
PPFIA1-223	ENST00000532793	JCAD	Q9P266	1359 aa		14.51	□□□□□ -0.09
PPFIA1-223	ENST00000532793	TRIM52	Q96A61	297 aa		14.51	□□□□□ -0.09
PPFIA1-223	ENST00000532793	AMOTL2	Q9Y2J4	779 aa		14.51	□□□□□ -0.09
PPFIA1-223	ENST00000532793	NRXN3	Q9Y4C0	1643 aa		14.51	□□□□□ -0.09
PPFIA1-223	ENST00000532793	NAIP	Q13075	1403 aa		14.49	□□□□□ -0.09
PPFIA1-223	ENST00000532793	XRN1	Q8IZH2	1706 aa	Known RBP	14.49	□□□□□ -0.09
PPFIA1-223	ENST00000532793	COL16A1	Q07092	1604 aa	Predicted RBP	14.49	□□□□□ -0.09
PPFIA1-223	ENST00000532793	ZRANB1	Q9UGI0	708 aa		14.49	□□□□□ -0.09
PPFIA1-223	ENST00000532793	NEXMIF	Q5QGS0	1516 aa		14.47	□□□□□ -0.09
PPFIA1-223	ENST00000532793	MEX3C	Q5U5Q3	659 aa	Known RBP	14.47	□□□□□ -0.09
PPFIA1-223	ENST00000532793	AHDC1	Q5TGY3	1603 aa	Predicted RBP	14.47	□□□□□ -0.09
PPFIA1-223	ENST00000532793	DCC	P43146	1447 aa		14.47	□□□□□ -0.09
PPFIA1-223	ENST00000532793	SHPRH	Q149N8	1683 aa		14.46	□□□□□ -0.09
PPFIA1-223	ENST00000532793	HFM1	A2PYH4	1435 aa		14.46	□□□□□ -0.09
PPFIA1-223	ENST00000532793	PTPRU	Q92729	1446 aa		14.46	□□□□□ -0.09
PPFIA1-223	ENST00000532793	SPATA31A6	Q5VVP1	1343 aa		14.45	□□□□□ -0.1
PPFIA1-223	ENST00000532793	PCDH10	Q9P2E7	1040 aa		14.45	□□□□□ -0.1
PPFIA1-223	ENST00000532793	RGS17	Q9UGC6	210 aa	Predicted RBP	14.45	□□□□□ -0.1
PPFIA1-223	ENST00000532793	SETD1A	O15047	1707 aa	Known RBP	14.44	□□□□□ -0.1
PPFIA1-223	ENST00000532793	VGF	O15240	615 aa	Predicted RBP	14.43	□□□□□ -0.1
PPFIA1-223	ENST00000532793	NALCN	Q8IZF0	1738 aa		14.43	□□□□□ -0.1
PPFIA1-223	ENST00000532793	PPL	O60437	1756 aa		14.42	□□□□□ -0.1
PPFIA1-223	ENST00000532793	MET	P08581	1390 aa		14.42	□□□□□ -0.1
PPFIA1-223	ENST00000532793	ASXL1	Q8IXJ9	1541 aa		14.41	□□□□□ -0.1
PPFIA1-223	ENST00000532793	NHSL1	Q5SYE7	1610 aa		14.41	□□□□□ -0.1
PPFIA1-223	ENST00000532793	LCE2D	Q5TA82	110 aa	Predicted RBP	14.41	□□□□□ -0.1
PPFIA1-223	ENST00000532793	PELP1	Q8IZL8	1130 aa	Known RBP	14.41	□□□□□ -0.1
PPFIA1-223	ENST00000532793	ADGRL3	Q9HAR2	1447 aa		14.41	□□□□□ -0.1
PPFIA1-223	ENST00000532793	POTEA	Q6S8J7	498 aa		14.4	□□□□□ -0.1
PPFIA1-223	ENST00000532793	BRINP3	Q76B58	766 aa		14.4	□□□□□ -0.1
PPFIA1-223	ENST00000532793	RPGRIP1L	Q68CZ1	1315 aa		14.4	□□□□□ -0.1
PPFIA1-223	ENST00000532793	ZNF772	Q68DY9	489 aa	Predicted RBP	14.39	□□□□□ -0.11
PPFIA1-223	ENST00000532793	MST1R	Q04912	1400 aa		14.39	□□□□□ -0.11
PPFIA1-223	ENST00000532793	POTEJ	P0CG39	1038 aa		14.38	□□□□□ -0.11
PPFIA1-223	ENST00000532793	LRP6	O75581	1613 aa		14.37	□□□□□ -0.11
PPFIA1-223	ENST00000532793	NUTM2B	A6NNL0	878 aa	Predicted RBP	14.37	□□□□□ -0.11
PPFIA1-223	ENST00000532793	NUTM2E	B1AL46	878 aa	Predicted RBP	14.37	□□□□□ -0.11
PPFIA1-223	ENST00000532793	NUTM2A	Q8IVF1	878 aa	Predicted RBP	14.37	□□□□□ -0.11
PPFIA1-223	ENST00000532793	CCDC144A	A2RUR9	1427 aa		14.37	□□□□□ -0.11
PPFIA1-223	ENST00000532793	PTCH1	Q13635	1447 aa		14.36	□□□□□ -0.11
PPFIA1-223	ENST00000532793	LRRC59	Q96AG4	307 aa	Known RBP	14.36	□□□□□ -0.11
PPFIA1-223	ENST00000532793	SETD5	Q9C0A6	1442 aa		14.34	□□□□□ -0.11
PPFIA1-223	ENST00000532793	ACIN1	Q9UKV3	1341 aa	Known RBP	14.33	□□□□□ -0.12
PPFIA1-223	ENST00000532793	IFT172	Q9UG01	1749 aa		14.32	□□□□□ -0.12
PPFIA1-223	ENST00000532793	ROBO2	Q9HCK4	1378 aa		14.31	□□□□□ -0.12
PPFIA1-223	ENST00000532793	C1orf167	Q5SNV9	1468 aa		14.31	□□□□□ -0.12
PPFIA1-223	ENST00000532793	RGL3	Q3MIN7	710 aa		14.3	□□□□□ -0.12
PPFIA1-223	ENST00000532793	CREBZF	Q9NS37	354 aa		14.3	□□□□□ -0.12
PPFIA1-223	ENST00000532793	RXRB	P28702	533 aa		14.29	□□□□□ -0.12
PPFIA1-223	ENST00000532793	MPHOSPH9	Q99550	1183 aa		14.29	□□□□□ -0.12
PPFIA1-223	ENST00000532793	ANKRD30B	Q9BXX2	1392 aa		14.29	□□□□□ -0.12
PPFIA1-223	ENST00000532793	PRAG1	Q86YV5	1406 aa		14.29	□□□□□ -0.12
PPFIA1-223	ENST00000532793	LAMC1	P11047	1609 aa		14.29	□□□□□ -0.12
PPFIA1-223	ENST00000532793	AFF2	P51816	1311 aa		14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	CDC42BPG	Q6DT37	1551 aa		14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	KNDC1	Q76NI1	1749 aa		14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	PNPLA6	Q8IY17	1366 aa		14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	DDX17	Q92841	729 aa	Known RBP	14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	C8orf37	Q96NL8	207 aa		14.28	□□□□□ -0.12
PPFIA1-223	ENST00000532793	PHF12	Q96QT6	1004 aa		14.27	□□□□□ -0.13
PPFIA1-223	ENST00000532793	ADGRF5	Q8IZF2	1346 aa		14.25	□□□□□ -0.13
PPFIA1-223	ENST00000532793	ORAI2	Q96SN7	254 aa		14.25	□□□□□ -0.13
PPFIA1-223	ENST00000532793	STK26	Q9P289	416 aa		14.25	□□□□□ -0.13
PPFIA1-223	ENST00000532793	CDK12	Q9NYV4	1490 aa	Predicted RBP	14.25	□□□□□ -0.13
PPFIA1-223	ENST00000532793	SPATA31E1	Q6ZUB1	1445 aa		14.24	□□□□□ -0.13
PPFIA1-223	ENST00000532793	ADAMTS2	O95450	1211 aa		14.24	□□□□□ -0.13
PPFIA1-223	ENST00000532793	ESCO1	Q5FWF5	840 aa		14.24	□□□□□ -0.13
PPFIA1-223	ENST00000532793	NGLY1	Q96IV0	654 aa		14.24	□□□□□ -0.13
PPFIA1-223	ENST00000532793	LRPPRC	P42704	1394 aa	Known RBP	14.23	□□□□□ -0.13
PPFIA1-223	ENST00000532793	SOS2	Q07890	1332 aa	Predicted RBP	14.23	□□□□□ -0.13
PPFIA1-223	ENST00000532793	NPHP3	Q7Z494	1330 aa		14.23	□□□□□ -0.13
PPFIA1-223	ENST00000532793	MARF1	Q9Y4F3	1742 aa	Known RBP	14.22	□□□□□ -0.13
PPFIA1-223	ENST00000532793	KIF1A	Q12756	1690 aa		14.22	□□□□□ -0.13
PPFIA1-223	ENST00000532793	TECPR2	O15040	1411 aa		14.22	□□□□□ -0.13
PPFIA1-223	ENST00000532793	PIK3C2G	O75747	1445 aa		14.22	□□□□□ -0.13
PPFIA1-223	ENST00000532793	COL22A1	Q8NFW1	1626 aa	Predicted RBP	14.22	□□□□□ -0.13
PPFIA1-223	ENST00000532793	FMN2	Q9NZ56	1722 aa		14.21	□□□□□ -0.13
PPFIA1-223	ENST00000532793	QTRT2	Q9H974	415 aa	Known RBP	14.21	□□□□□ -0.13
PPFIA1-223	ENST00000532793	RBM6	P78332	1123 aa	Known RBP	14.2	□□□□□ -0.14
PPFIA1-223	ENST00000532793	TMEM132E	Q6IEE7	984 aa		14.2	□□□□□ -0.14
PPFIA1-223	ENST00000532793	ABCC11	Q96J66	1382 aa		14.2	□□□□□ -0.14
PPFIA1-223	ENST00000532793	YTHDC2	Q9H6S0	1430 aa	Known RBP	14.19	□□□□□ -0.14
PPFIA1-223	ENST00000532793	NUTM2F	A1L443	756 aa		14.19	□□□□□ -0.14
PPFIA1-223	ENST00000532793	WAPL	Q7Z5K2	1190 aa		14.19	□□□□□ -0.14
PPFIA1-223	ENST00000532793	METRN	Q9UJH8	293 aa		14.19	□□□□□ -0.14
PPFIA1-223	ENST00000532793	UPF1	Q92900	1129 aa	Known RBP eCLIP	14.18	□□□□□ -0.14
PPFIA1-223	ENST00000532793	USP21	Q9UK80	565 aa		14.18	□□□□□ -0.14
PPFIA1-223	ENST00000532793	RGPD8	O14715	1765 aa	Predicted RBP	14.18	□□□□□ -0.14

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