RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 METP08581 1390 aa11.59□□□□□ -0.55
TRIM49-202ENST00000532501 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
TRIM49-202ENST00000532501 ZNF335Q9H4Z2 1342 aaPredicted RBP11.58□□□□□ -0.56
TRIM49-202ENST00000532501 SETD1AO15047 1707 aaKnown RBP11.58□□□□□ -0.56
TRIM49-202ENST00000532501 CFAP70Q5T0N1 1121 aa11.58□□□□□ -0.56
TRIM49-202ENST00000532501 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.58□□□□□ -0.56
TRIM49-202ENST00000532501 FBXO41Q8TF61 875 aa11.58□□□□□ -0.56
TRIM49-202ENST00000532501 TONSLQ96HA7 1378 aa11.57□□□□□ -0.56
TRIM49-202ENST00000532501 ALKQ9UM73 1620 aa11.56□□□□□ -0.56
TRIM49-202ENST00000532501 VGFO15240 615 aaPredicted RBP11.56□□□□□ -0.56
TRIM49-202ENST00000532501 ADGRB1O14514 1584 aa11.55□□□□□ -0.56
TRIM49-202ENST00000532501 NBPF1Q3BBV0 1214 aa11.55□□□□□ -0.56
TRIM49-202ENST00000532501 TMEM132EQ6IEE7 984 aa11.55□□□□□ -0.56
TRIM49-202ENST00000532501 BCANQ96GW7 911 aa11.54□□□□□ -0.56
TRIM49-202ENST00000532501 STRCP1A6NGW2 1772 aa11.54□□□□□ -0.56
TRIM49-202ENST00000532501 ZNF579Q8NAF0 562 aaKnown RBP11.53□□□□□ -0.56
TRIM49-202ENST00000532501 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
TRIM49-202ENST00000532501 TBX22Q9Y458 520 aa11.53□□□□□ -0.56
TRIM49-202ENST00000532501 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.56
TRIM49-202ENST00000532501 RBM33Q96EV2 1170 aaKnown RBP11.52□□□□□ -0.56
TRIM49-202ENST00000532501 ZRANB1Q9UGI0 708 aa11.52□□□□□ -0.56
TRIM49-202ENST00000532501 LTBP4Q8N2S1 1624 aa11.52□□□□□ -0.57
TRIM49-202ENST00000532501 DIP2AQ14689 1571 aa11.52□□□□□ -0.57
TRIM49-202ENST00000532501 KCNA6P17658 529 aa11.52□□□□□ -0.57
TRIM49-202ENST00000532501 NWD1Q149M9 1564 aa11.51□□□□□ -0.57
TRIM49-202ENST00000532501 HDGFP51858 240 aaKnown RBP11.51□□□□□ -0.57
TRIM49-202ENST00000532501 XRN1Q8IZH2 1706 aaKnown RBP11.5□□□□□ -0.57
TRIM49-202ENST00000532501 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
TRIM49-202ENST00000532501 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
TRIM49-202ENST00000532501 RALGAPBQ86X10 1494 aa11.49□□□□□ -0.57
TRIM49-202ENST00000532501 TRPM1Q7Z4N2 1603 aa11.49□□□□□ -0.57
TRIM49-202ENST00000532501 LRPPRCP42704 1394 aaKnown RBP11.49□□□□□ -0.57
TRIM49-202ENST00000532501 GALR2O43603 387 aaPredicted RBP11.49□□□□□ -0.57
TRIM49-202ENST00000532501 STK26Q9P289 416 aa11.49□□□□□ -0.57
TRIM49-202ENST00000532501 AMOTL2Q9Y2J4 779 aa11.49□□□□□ -0.57
TRIM49-202ENST00000532501 YTHDC2Q9H6S0 1430 aaKnown RBP11.49□□□□□ -0.57
TRIM49-202ENST00000532501 GPRASP1Q5JY77 1395 aa11.47□□□□□ -0.57
TRIM49-202ENST00000532501 PIK3R4Q99570 1358 aa11.47□□□□□ -0.57
TRIM49-202ENST00000532501 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
TRIM49-202ENST00000532501 TECPR2O15040 1411 aa11.46□□□□□ -0.57
TRIM49-202ENST00000532501 STAC3Q96MF2 364 aa11.46□□□□□ -0.57
TRIM49-202ENST00000532501 LAMC1P11047 1609 aa11.46□□□□□ -0.58
TRIM49-202ENST00000532501 CPS1P31327 1500 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 WAPLQ7Z5K2 1190 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 CERKQ8TCT0 537 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 TIMELESSQ9UNS1 1208 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 TRAK1Q9UPV9 953 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
TRIM49-202ENST00000532501 ROCK2O75116 1388 aaKnown RBP11.45□□□□□ -0.58
TRIM49-202ENST00000532501 TMEM94Q12767 1356 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 PTCH1Q13635 1447 aa11.45□□□□□ -0.58
TRIM49-202ENST00000532501 NKTRP30414 1462 aaKnown RBP11.45□□□□□ -0.58
TRIM49-202ENST00000532501 KIAA1210Q9ULL0 1709 aa11.44□□□□□ -0.58
TRIM49-202ENST00000532501 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIM49-202ENST00000532501 KNDC1Q76NI1 1749 aa11.42□□□□□ -0.58
TRIM49-202ENST00000532501 PROSER2Q86WR7 435 aaPredicted RBP11.42□□□□□ -0.58
TRIM49-202ENST00000532501 PRAM1Q96QH2 718 aa11.42□□□□□ -0.58
TRIM49-202ENST00000532501 DLC1Q96QB1 1528 aa11.42□□□□□ -0.58
TRIM49-202ENST00000532501 XIRP1Q702N8 1843 aaKnown RBP11.41□□□□□ -0.58
TRIM49-202ENST00000532501 ARHGEF28Q8N1W1 1705 aaKnown RBP11.41□□□□□ -0.58
TRIM49-202ENST00000532501 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
TRIM49-202ENST00000532501 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.4□□□□□ -0.58
TRIM49-202ENST00000532501 FAM135BQ49AJ0 1406 aa11.39□□□□□ -0.59
TRIM49-202ENST00000532501 NALCNQ8IZF0 1738 aa11.39□□□□□ -0.59
TRIM49-202ENST00000532501 ADGRL3Q9HAR2 1447 aa11.38□□□□□ -0.59
TRIM49-202ENST00000532501 USP47Q96K76 1375 aa11.38□□□□□ -0.59
TRIM49-202ENST00000532501 MINK1Q8N4C8 1332 aaPredicted RBP11.38□□□□□ -0.59
TRIM49-202ENST00000532501 HIRIP3Q9BW71 556 aaPredicted RBP11.38□□□□□ -0.59
TRIM49-202ENST00000532501 ZBTB22O15209 634 aa11.37□□□□□ -0.59
TRIM49-202ENST00000532501 FAM163AQ96GL9 167 aaPredicted RBP11.37□□□□□ -0.59
TRIM49-202ENST00000532501 TESK2Q96S53 571 aa11.36□□□□□ -0.59
TRIM49-202ENST00000532501 CENPJQ9HC77 1338 aaPredicted RBP11.36□□□□□ -0.59
TRIM49-202ENST00000532501 TULP4Q9NRJ4 1543 aa11.36□□□□□ -0.59
TRIM49-202ENST00000532501 ST20-MTHFSA0A0A6YYL1 179 aa11.35□□□□□ -0.59
TRIM49-202ENST00000532501 ZEB1P37275 1124 aaPredicted RBP11.35□□□□□ -0.59
TRIM49-202ENST00000532501 SIRT1Q96EB6 747 aa11.35□□□□□ -0.59
TRIM49-202ENST00000532501 HSPA5P11021 654 aaKnown RBP11.35□□□□□ -0.59
TRIM49-202ENST00000532501 POGKQ9P215 609 aa11.35□□□□□ -0.59
TRIM49-202ENST00000532501 PRR36Q9H6K5 1346 aa11.34□□□□□ -0.59
TRIM49-202ENST00000532501 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
TRIM49-202ENST00000532501 LCE2DQ5TA82 110 aaPredicted RBP11.34□□□□□ -0.59
TRIM49-202ENST00000532501 ADGRB2O60241 1585 aa11.33□□□□□ -0.6
TRIM49-202ENST00000532501 CDC42BPGQ6DT37 1551 aa11.33□□□□□ -0.6
TRIM49-202ENST00000532501 MST1RQ04912 1400 aa11.33□□□□□ -0.6
TRIM49-202ENST00000532501 QRICH2Q9H0J4 1663 aa11.33□□□□□ -0.6
TRIM49-202ENST00000532501 DISP3Q9P2K9 1392 aa11.32□□□□□ -0.6
TRIM49-202ENST00000532501 NCOA3Q9Y6Q9 1424 aa11.32□□□□□ -0.6
TRIM49-202ENST00000532501 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
TRIM49-202ENST00000532501 PELP1Q8IZL8 1130 aaKnown RBP11.32□□□□□ -0.6
TRIM49-202ENST00000532501 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
TRIM49-202ENST00000532501 C11orf95C9JLR9 678 aaPredicted RBP11.31□□□□□ -0.6
TRIM49-202ENST00000532501 ILDR2Q71H61 639 aa11.31□□□□□ -0.6
TRIM49-202ENST00000532501 C19orf44Q9H6X5 657 aa11.31□□□□□ -0.6
TRIM49-202ENST00000532501 MSH6P52701 1360 aa11.31□□□□□ -0.6
TRIM49-202ENST00000532501 DCCP43146 1447 aa11.3□□□□□ -0.6
TRIM49-202ENST00000532501 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
TRIM49-202ENST00000532501 SBNO2Q9Y2G9 1366 aa11.3□□□□□ -0.6
TRIM49-202ENST00000532501 ATP7BP35670 1465 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms