RNA–Protein interactions for RNA: ENST00000532419.5

TCN1-203, Transcript of transcobalamin 1, humanhuman

TSL 5

Gene TCN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-203ENST00000532419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.86□□□□□ -0.99
TCN1-203ENST00000532419 SLC10A3P09131 477 aa8.86□□□□□ -0.99
TCN1-203ENST00000532419 PLA2G2CQ5R387 149 aa8.86□□□□□ -0.99
TCN1-203ENST00000532419 PXYLP1Q8TE99 480 aa8.86□□□□□ -0.99
TCN1-203ENST00000532419 AAASQ9NRG9 546 aa8.86□□□□□ -0.99
TCN1-203ENST00000532419 FECHP22830 423 aa8.85□□□□□ -0.99
TCN1-203ENST00000532419 METTL3Q86U44 580 aaKnown RBP8.85□□□□□ -0.99
TCN1-203ENST00000532419 FOXC1Q12948 553 aa8.84□□□□□ -0.99
TCN1-203ENST00000532419 TREML4Q6UXN2 200 aa8.84□□□□□ -0.99
TCN1-203ENST00000532419 LMOD2Q6P5Q4 547 aa8.83□□□□□ -1
TCN1-203ENST00000532419 SCUBE3Q8IX30 993 aa8.83□□□□□ -1
TCN1-203ENST00000532419 CHD1O14646 1710 aa8.83□□□□□ -1
TCN1-203ENST00000532419 URB2Q14146 1524 aaKnown RBP8.82□□□□□ -1
TCN1-203ENST00000532419 MAP2K5Q13163 448 aa8.82□□□□□ -1
TCN1-203ENST00000532419 PUS10Q3MIT2 529 aaKnown RBP8.81□□□□□ -1
TCN1-203ENST00000532419 PKD2L1Q9P0L9 805 aa8.81□□□□□ -1
TCN1-203ENST00000532419 MINK1Q8N4C8 1332 aaPredicted RBP8.8□□□□□ -1
TCN1-203ENST00000532419 ARHGEF11O15085 1522 aa8.8□□□□□ -1
TCN1-203ENST00000532419 RSPH4AQ5TD94 716 aa8.8□□□□□ -1
TCN1-203ENST00000532419 SPSB2Q99619 263 aa8.8□□□□□ -1
TCN1-203ENST00000532419 CFTRP13569 1480 aa8.79□□□□□ -1
TCN1-203ENST00000532419 LCE2AQ5TA79 106 aaPredicted RBP8.79□□□□□ -1
TCN1-203ENST00000532419 CYB5RLQ6IPT4 315 aa8.78□□□□□ -1
TCN1-203ENST00000532419 IRF6O14896 467 aa8.77□□□□□ -1.01
TCN1-203ENST00000532419 RPIAP49247 311 aa8.77□□□□□ -1.01
TCN1-203ENST00000532419 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
TCN1-203ENST00000532419 ZNF608Q9ULD9 1512 aaPredicted RBP8.76□□□□□ -1.01
TCN1-203ENST00000532419 CD2BP2O95400 341 aaKnown RBP8.76□□□□□ -1.01
TCN1-203ENST00000532419 CYP4X1Q8N118 509 aa8.76□□□□□ -1.01
TCN1-203ENST00000532419 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
TCN1-203ENST00000532419 DAXXQ9UER7 740 aaPredicted RBP8.76□□□□□ -1.01
TCN1-203ENST00000532419 AXIN1O15169 862 aa8.75□□□□□ -1.01
TCN1-203ENST00000532419 C11orf95C9JLR9 678 aaPredicted RBP8.74□□□□□ -1.01
TCN1-203ENST00000532419 WFS1O76024 890 aa8.74□□□□□ -1.01
TCN1-203ENST00000532419 AVPP01185 164 aa8.74□□□□□ -1.01
TCN1-203ENST00000532419 SULF1Q8IWU6 871 aa8.74□□□□□ -1.01
TCN1-203ENST00000532419 BCANQ96GW7 911 aa8.74□□□□□ -1.01
TCN1-203ENST00000532419 TOR4AQ9NXH8 423 aa8.74□□□□□ -1.01
TCN1-203ENST00000532419 GMPR2Q9P2T1 348 aaKnown RBP8.74□□□□□ -1.01
TCN1-203ENST00000532419 FCF1Q9Y324 198 aaKnown RBP8.74□□□□□ -1.01
TCN1-203ENST00000532419 EIF4G3O43432 1585 aaKnown RBP8.73□□□□□ -1.01
TCN1-203ENST00000532419 ZMYND10O75800 440 aa8.73□□□□□ -1.01
TCN1-203ENST00000532419 BARGINQ6ZT62 677 aa8.73□□□□□ -1.01
TCN1-203ENST00000532419 ZC3H15Q8WU90 426 aaKnown RBP8.73□□□□□ -1.01
TCN1-203ENST00000532419 PHOX2BQ99453 314 aa8.73□□□□□ -1.01
TCN1-203ENST00000532419 TOP2AP11388 1531 aaKnown RBP8.73□□□□□ -1.01
TCN1-203ENST00000532419 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
TCN1-203ENST00000532419 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
TCN1-203ENST00000532419 CTC1Q2NKJ3 1217 aa8.71□□□□□ -1.02
TCN1-203ENST00000532419 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.02
TCN1-203ENST00000532419 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
TCN1-203ENST00000532419 MORN1Q5T089 497 aa8.7□□□□□ -1.02
TCN1-203ENST00000532419 TTC24A2A3L6 582 aaPredicted RBP8.69□□□□□ -1.02
TCN1-203ENST00000532419 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
TCN1-203ENST00000532419 THAP11Q96EK4 314 aa8.69□□□□□ -1.02
TCN1-203ENST00000532419 TOPBP1Q92547 1522 aa8.69□□□□□ -1.02
TCN1-203ENST00000532419 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
TCN1-203ENST00000532419 ZBTB24O43167 697 aaPredicted RBP8.68□□□□□ -1.02
TCN1-203ENST00000532419 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
TCN1-203ENST00000532419 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
TCN1-203ENST00000532419 FUT2Q10981 343 aa8.68□□□□□ -1.02
TCN1-203ENST00000532419 FAM160A2Q8N612 972 aaPredicted RBP8.68□□□□□ -1.02
TCN1-203ENST00000532419 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
TCN1-203ENST00000532419 ARAP1Q96P48 1450 aa8.68□□□□□ -1.02
TCN1-203ENST00000532419 CLCN1P35523 988 aa8.67□□□□□ -1.02
TCN1-203ENST00000532419 RSF1Q96T23 1441 aaPredicted RBP8.67□□□□□ -1.02
TCN1-203ENST00000532419 STK17AQ9UEE5 414 aa8.67□□□□□ -1.02
TCN1-203ENST00000532419 SLC27A5Q9Y2P5 690 aa8.67□□□□□ -1.02
TCN1-203ENST00000532419 TARBP1Q13395 1621 aaKnown RBP8.66□□□□□ -1.02
TCN1-203ENST00000532419 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
TCN1-203ENST00000532419 ABCC8Q09428 1581 aa8.65□□□□□ -1.02
TCN1-203ENST00000532419 DNMBPQ6XZF7 1577 aa8.65□□□□□ -1.02
TCN1-203ENST00000532419 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.02
TCN1-203ENST00000532419 MDM2Q00987 491 aaPredicted RBP8.65□□□□□ -1.02
TCN1-203ENST00000532419 GPCPD1Q9NPB8 672 aa8.65□□□□□ -1.02
TCN1-203ENST00000532419 PRDM9Q9NQV7 894 aa8.65□□□□□ -1.02
TCN1-203ENST00000532419 GCGRP47871 477 aa8.64□□□□□ -1.03
TCN1-203ENST00000532419 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
TCN1-203ENST00000532419 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
TCN1-203ENST00000532419 CCDC88BA6NC98 1476 aa8.64□□□□□ -1.03
TCN1-203ENST00000532419 WIPF1O43516 503 aa8.63□□□□□ -1.03
TCN1-203ENST00000532419 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
TCN1-203ENST00000532419 WNT7AO00755 349 aa8.62□□□□□ -1.03
TCN1-203ENST00000532419 CD46P15529 392 aa8.62□□□□□ -1.03
TCN1-203ENST00000532419 AMHR2Q16671 573 aa8.62□□□□□ -1.03
TCN1-203ENST00000532419 SNIP1Q8TAD8 396 aaKnown RBP8.62□□□□□ -1.03
TCN1-203ENST00000532419 SMPD1P17405 629 aa8.61□□□□□ -1.03
TCN1-203ENST00000532419 GRIPAP1Q4V328 841 aa8.61□□□□□ -1.03
TCN1-203ENST00000532419 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
TCN1-203ENST00000532419 AK7Q96M32 723 aa8.61□□□□□ -1.03
TCN1-203ENST00000532419 ATP13A2Q9NQ11 1180 aa8.61□□□□□ -1.03
TCN1-203ENST00000532419 SNRPBP14678 240 aaKnown RBP8.6□□□□□ -1.03
TCN1-203ENST00000532419 FAM217BQ9NTX9 383 aaPredicted RBP8.6□□□□□ -1.03
TCN1-203ENST00000532419 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
TCN1-203ENST00000532419 TRIM32Q13049 653 aa8.59□□□□□ -1.03
TCN1-203ENST00000532419 RNF19BQ6ZMZ0 732 aa8.59□□□□□ -1.03
TCN1-203ENST00000532419 SENP2Q9HC62 589 aa8.59□□□□□ -1.03
TCN1-203ENST00000532419 SYNJ1O43426 1573 aa8.58□□□□□ -1.04
TCN1-203ENST00000532419 J3QL48 77 aa8.58□□□□□ -1.04
TCN1-203ENST00000532419 USP46P62068 366 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms