RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 TNRQ92752 1358 aa20.33■□□□□ 0.85
SRPRA-206ENST00000532259 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
SRPRA-206ENST00000532259 WDR43Q15061 677 aaKnown RBP eCLIP20.31■□□□□ 0.841e-6■■■□□ 17.5
SRPRA-206ENST00000532259 PLEKHH1Q9ULM0 1364 aa20.31■□□□□ 0.84
SRPRA-206ENST00000532259 PELP1Q8IZL8 1130 aaKnown RBP20.3■□□□□ 0.84
SRPRA-206ENST00000532259 METP08581 1390 aa20.3■□□□□ 0.84
SRPRA-206ENST00000532259 BLMP54132 1417 aaPredicted RBP20.29■□□□□ 0.84
SRPRA-206ENST00000532259 CCDC146Q8IYE0 955 aa20.28■□□□□ 0.84
SRPRA-206ENST00000532259 MORC1Q86VD1 984 aa20.27■□□□□ 0.84
SRPRA-206ENST00000532259 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
SRPRA-206ENST00000532259 CDK19Q9BWU1 502 aa20.26■□□□□ 0.83
SRPRA-206ENST00000532259 TXNDC2Q86VQ3 553 aa20.26■□□□□ 0.83
SRPRA-206ENST00000532259 SETD1AO15047 1707 aaKnown RBP20.25■□□□□ 0.83
SRPRA-206ENST00000532259 A0A1W2PP64 1363 aa20.24■□□□□ 0.83
SRPRA-206ENST00000532259 ANKRD36BQ8N2N9 1353 aa20.24■□□□□ 0.83
SRPRA-206ENST00000532259 LTKP29376 864 aa20.24■□□□□ 0.83
SRPRA-206ENST00000532259 PUS7Q96PZ0 661 aaKnown RBP20.23■□□□□ 0.83
SRPRA-206ENST00000532259 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
SRPRA-206ENST00000532259 CGNL1Q0VF96 1302 aa20.23■□□□□ 0.83
SRPRA-206ENST00000532259 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.22■□□□□ 0.83
SRPRA-206ENST00000532259 B4GALNT3Q6L9W6 998 aa20.22■□□□□ 0.83
SRPRA-206ENST00000532259 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
SRPRA-206ENST00000532259 CABP1Q9NZU7 370 aa20.21■□□□□ 0.83
SRPRA-206ENST00000532259 GGNBP2Q9H3C7 697 aa20.2■□□□□ 0.82
SRPRA-206ENST00000532259 ABCC11Q96J66 1382 aa20.19■□□□□ 0.82
SRPRA-206ENST00000532259 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
SRPRA-206ENST00000532259 MTHFSP49914 203 aa20.18■□□□□ 0.82
SRPRA-206ENST00000532259 TSHZ2Q9NRE2 1034 aa20.18■□□□□ 0.82
SRPRA-206ENST00000532259 NCKAP5LQ9HCH0 1330 aa20.18■□□□□ 0.82
SRPRA-206ENST00000532259 SLC26A8Q96RN1 970 aa20.17■□□□□ 0.82
SRPRA-206ENST00000532259 C3P01024 1663 aa20.17■□□□□ 0.82
SRPRA-206ENST00000532259 INSRP06213 1382 aa20.17■□□□□ 0.82
SRPRA-206ENST00000532259 ATAD2Q6PL18 1390 aa20.17■□□□□ 0.82
SRPRA-206ENST00000532259 APAF1O14727 1248 aa20.16■□□□□ 0.82
SRPRA-206ENST00000532259 PPP4R2Q9NY27 417 aa20.16■□□□□ 0.82
SRPRA-206ENST00000532259 RNF123Q5XPI4 1314 aa20.16■□□□□ 0.82
SRPRA-206ENST00000532259 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
SRPRA-206ENST00000532259 RCAN3Q9UKA8 241 aa20.15■□□□□ 0.82
SRPRA-206ENST00000532259 FYB1O15117 783 aa20.14■□□□□ 0.82
SRPRA-206ENST00000532259 DLC1Q96QB1 1528 aa20.14■□□□□ 0.81
SRPRA-206ENST00000532259 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
SRPRA-206ENST00000532259 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
SRPRA-206ENST00000532259 POLR3AO14802 1390 aaPredicted RBP20.13■□□□□ 0.81
SRPRA-206ENST00000532259 FER1L4A9Z1Z3 1794 aa20.13■□□□□ 0.81
SRPRA-206ENST00000532259 USP32Q8NFA0 1604 aa20.13■□□□□ 0.81
SRPRA-206ENST00000532259 TERF2IPQ9NYB0 399 aa20.13■□□□□ 0.81
SRPRA-206ENST00000532259 FBLN1P23142 703 aa20.12■□□□□ 0.81
SRPRA-206ENST00000532259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.12■□□□□ 0.81
SRPRA-206ENST00000532259 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
SRPRA-206ENST00000532259 WASLO00401 505 aaPredicted RBP20.11■□□□□ 0.81
SRPRA-206ENST00000532259 NINLQ9Y2I6 1382 aa20.11■□□□□ 0.81
SRPRA-206ENST00000532259 NLRP1Q9C000 1473 aa20.11■□□□□ 0.81
SRPRA-206ENST00000532259 NEUROD2Q15784 382 aa20.1■□□□□ 0.81
SRPRA-206ENST00000532259 SPINK5Q9NQ38 1064 aaPredicted RBP20.1■□□□□ 0.81
SRPRA-206ENST00000532259 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
SRPRA-206ENST00000532259 ZNF521Q96K83 1311 aa20.1■□□□□ 0.81
SRPRA-206ENST00000532259 PLIN1O60240 522 aa20.1■□□□□ 0.81
SRPRA-206ENST00000532259 NUTM2FA1L443 756 aa20.09■□□□□ 0.81
SRPRA-206ENST00000532259 HDGFL2Q7Z4V5 671 aaPredicted RBP20.09■□□□□ 0.81
SRPRA-206ENST00000532259 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
SRPRA-206ENST00000532259 ERICH6BQ5W0A0 696 aa20.09■□□□□ 0.81
SRPRA-206ENST00000532259 RRP1P56182 461 aaKnown RBP20.08■□□□□ 0.81
SRPRA-206ENST00000532259 RRP7AQ9Y3A4 280 aaKnown RBP20.08■□□□□ 0.8
SRPRA-206ENST00000532259 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
SRPRA-206ENST00000532259 NSD2O96028 1365 aa20.06■□□□□ 0.8
SRPRA-206ENST00000532259 DUSP27Q5VZP5 1158 aa20.06■□□□□ 0.8
SRPRA-206ENST00000532259 NUDT16Q96DE0 195 aaKnown RBP20.06■□□□□ 0.8
SRPRA-206ENST00000532259 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
SRPRA-206ENST00000532259 PTPRUQ92729 1446 aa20.05■□□□□ 0.8
SRPRA-206ENST00000532259 TECPR2O15040 1411 aa20.05■□□□□ 0.8
SRPRA-206ENST00000532259 ZRANB1Q9UGI0 708 aa20.05■□□□□ 0.8
SRPRA-206ENST00000532259 PRR36Q9H6K5 1346 aa20.05■□□□□ 0.8
SRPRA-206ENST00000532259 PPIP5K1Q6PFW1 1433 aa20.05■□□□□ 0.8
SRPRA-206ENST00000532259 GOLGA2Q08379 1002 aa20.04■□□□□ 0.8
SRPRA-206ENST00000532259 FAM135BQ49AJ0 1406 aa20.03■□□□□ 0.8
SRPRA-206ENST00000532259 EXOC6Q8TAG9 804 aa20.02■□□□□ 0.8
SRPRA-206ENST00000532259 CCDC136Q96JN2 1154 aa20.02■□□□□ 0.8
SRPRA-206ENST00000532259 CFAP53Q96M91 514 aa20.02■□□□□ 0.8
SRPRA-206ENST00000532259 CPS1P31327 1500 aa20.02■□□□□ 0.8
SRPRA-206ENST00000532259 U2AF1L5P0DN76 240 aaPredicted RBP20.01■□□□□ 0.79
SRPRA-206ENST00000532259 U2AF1Q01081 240 aaKnown RBP eCLIP20.01■□□□□ 0.795e-8■□□□□ 9.1
SRPRA-206ENST00000532259 NME9Q86XW9 330 aa20.01■□□□□ 0.79
SRPRA-206ENST00000532259 THEMISQ8N1K5 641 aaPredicted RBP20.01■□□□□ 0.79
SRPRA-206ENST00000532259 AMOTL2Q9Y2J4 779 aa20.01■□□□□ 0.79
SRPRA-206ENST00000532259 KNDC1Q76NI1 1749 aa20.01■□□□□ 0.79
SRPRA-206ENST00000532259 PPM1GO15355 546 aaPredicted RBP20.01■□□□□ 0.79
SRPRA-206ENST00000532259 SLFN5Q08AF3 891 aa20.01■□□□□ 0.79
SRPRA-206ENST00000532259 MED14O60244 1454 aa20.01■□□□□ 0.79
SRPRA-206ENST00000532259 ARHGAP23Q9P227 1491 aa20■□□□□ 0.79
SRPRA-206ENST00000532259 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
SRPRA-206ENST00000532259 TCP11L2Q8N4U5 519 aa20■□□□□ 0.79
SRPRA-206ENST00000532259 SIRT1Q96EB6 747 aa20■□□□□ 0.79
SRPRA-206ENST00000532259 CCDC61Q9Y6R9 512 aa20■□□□□ 0.79
SRPRA-206ENST00000532259 SIPA1L2Q9P2F8 1722 aaPredicted RBP20■□□□□ 0.79
SRPRA-206ENST00000532259 SLIT1O75093 1534 aa20■□□□□ 0.79
SRPRA-206ENST00000532259 RIMS1Q86UR5 1692 aaKnown RBP19.98■□□□□ 0.79
SRPRA-206ENST00000532259 CPSF1Q10570 1443 aaKnown RBP19.98■□□□□ 0.79
SRPRA-206ENST00000532259 ATP7BP35670 1465 aa19.98■□□□□ 0.79
SRPRA-206ENST00000532259 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
SRPRA-206ENST00000532259 RUNDC1Q96C34 613 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms