RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	DIP2B	Q9P265	1576 aa		10.45	□□□□□ -0.74
PUM1-222	ENST00000531867	KMT5B	Q4FZB7	885 aa		10.45	□□□□□ -0.74
PUM1-222	ENST00000531867	SULF1	Q8IWU6	871 aa		10.45	□□□□□ -0.74
PUM1-222	ENST00000531867	KDM6B	O15054	1643 aa		10.44	□□□□□ -0.74
PUM1-222	ENST00000531867	APLP1	P51693	650 aa		10.44	□□□□□ -0.74
PUM1-222	ENST00000531867	KRI1	Q8N9T8	703 aa	Known RBP	10.44	□□□□□ -0.74
PUM1-222	ENST00000531867	KCNC4	Q03721	635 aa		10.43	□□□□□ -0.74
PUM1-222	ENST00000531867	PHOX2B	Q99453	314 aa		10.43	□□□□□ -0.74
PUM1-222	ENST00000531867	CFH	P08603	1231 aa		10.42	□□□□□ -0.74
PUM1-222	ENST00000531867	PRG4	Q92954	1404 aa	Predicted RBP	10.41	□□□□□ -0.74
PUM1-222	ENST00000531867	FHAD1	B1AJZ9	1412 aa		10.41	□□□□□ -0.74
PUM1-222	ENST00000531867	IL21	Q9HBE4	155 aa		10.4	□□□□□ -0.74
PUM1-222	ENST00000531867	SLC10A3	P09131	477 aa		10.39	□□□□□ -0.75
PUM1-222	ENST00000531867	RDH13	Q8NBN7	331 aa		10.39	□□□□□ -0.75
PUM1-222	ENST00000531867	MTR	Q99707	1265 aa		10.39	□□□□□ -0.75
PUM1-222	ENST00000531867	DDX11L8	A8MPP1	907 aa		10.38	□□□□□ -0.75
PUM1-222	ENST00000531867	ACTN4	O43707	911 aa	Known RBP	10.38	□□□□□ -0.75
PUM1-222	ENST00000531867	TJAP1	Q5JTD0	557 aa		10.38	□□□□□ -0.75
PUM1-222	ENST00000531867	NLRP7	Q8WX94	980 aa		10.38	□□□□□ -0.75
PUM1-222	ENST00000531867	PCDHB3	Q9Y5E6	796 aa		10.38	□□□□□ -0.75
PUM1-222	ENST00000531867	ADCY10	Q96PN6	1610 aa		10.37	□□□□□ -0.75
PUM1-222	ENST00000531867	CLCN1	P35523	988 aa		10.37	□□□□□ -0.75
PUM1-222	ENST00000531867	MDM2	Q00987	491 aa	Predicted RBP	10.36	□□□□□ -0.75
PUM1-222	ENST00000531867	GPCPD1	Q9NPB8	672 aa		10.36	□□□□□ -0.75
PUM1-222	ENST00000531867	ERICH3	Q5RHP9	1530 aa		10.36	□□□□□ -0.75
PUM1-222	ENST00000531867	ADGRL1	O94910	1474 aa		10.36	□□□□□ -0.75
PUM1-222	ENST00000531867	HECW2	Q9P2P5	1572 aa		10.35	□□□□□ -0.75
PUM1-222	ENST00000531867		A0A0G2JS52	829 aa		10.35	□□□□□ -0.75
PUM1-222	ENST00000531867	TSPOAP1	O95153	1857 aa		10.35	□□□□□ -0.75
PUM1-222	ENST00000531867	WRN	Q14191	1432 aa	Predicted RBP eCLIP	10.33	□□□□□ -0.76
PUM1-222	ENST00000531867	COPS2	P61201	443 aa		10.33	□□□□□ -0.76
PUM1-222	ENST00000531867	AMHR2	Q16671	573 aa		10.33	□□□□□ -0.76
PUM1-222	ENST00000531867	AK7	Q96M32	723 aa		10.32	□□□□□ -0.76
PUM1-222	ENST00000531867	RUSC2	Q8N2Y8	1516 aa		10.32	□□□□□ -0.76
PUM1-222	ENST00000531867	PPRC1	Q5VV67	1664 aa	Known RBP	10.31	□□□□□ -0.76
PUM1-222	ENST00000531867	CD46	P15529	392 aa		10.31	□□□□□ -0.76
PUM1-222	ENST00000531867	GCGR	P47871	477 aa		10.31	□□□□□ -0.76
PUM1-222	ENST00000531867	BLOC1S3	Q6QNY0	202 aa		10.31	□□□□□ -0.76
PUM1-222	ENST00000531867	ZPR1	O75312	459 aa		10.3	□□□□□ -0.76
PUM1-222	ENST00000531867	NR1I2	O75469	434 aa		10.3	□□□□□ -0.76
PUM1-222	ENST00000531867	TTLL12	Q14166	644 aa	Predicted RBP	10.3	□□□□□ -0.76
PUM1-222	ENST00000531867	FBXO41	Q8TF61	875 aa		10.3	□□□□□ -0.76
PUM1-222	ENST00000531867	TMUB1	Q9BVT8	246 aa		10.3	□□□□□ -0.76
PUM1-222	ENST00000531867	RGS20	O76081	388 aa		10.29	□□□□□ -0.76
PUM1-222	ENST00000531867	GRIPAP1	Q4V328	841 aa		10.29	□□□□□ -0.76
PUM1-222	ENST00000531867	FAM217B	Q9NTX9	383 aa	Predicted RBP	10.29	□□□□□ -0.76
PUM1-222	ENST00000531867	GLI2	P10070	1586 aa		10.29	□□□□□ -0.76
PUM1-222	ENST00000531867	BIVM-ERCC5	R4GMW8	1640 aa		10.29	□□□□□ -0.76
PUM1-222	ENST00000531867	ZNF516	Q92618	1163 aa		10.28	□□□□□ -0.76
PUM1-222	ENST00000531867	TOP2B	Q02880	1626 aa		10.28	□□□□□ -0.76
PUM1-222	ENST00000531867	ATP6V1A	P38606	617 aa		10.27	□□□□□ -0.77
PUM1-222	ENST00000531867	COL17A1	Q9UMD9	1497 aa	Predicted RBP	10.27	□□□□□ -0.77
PUM1-222	ENST00000531867	TRIM66	O15016	1216 aa		10.26	□□□□□ -0.77
PUM1-222	ENST00000531867	USP46	P62068	366 aa		10.26	□□□□□ -0.77
PUM1-222	ENST00000531867	FUT2	Q10981	343 aa		10.26	□□□□□ -0.77
PUM1-222	ENST00000531867	GGCX	P38435	758 aa		10.25	□□□□□ -0.77
PUM1-222	ENST00000531867	MORN1	Q5T089	497 aa		10.24	□□□□□ -0.77
PUM1-222	ENST00000531867	GIGYF2	Q6Y7W6	1299 aa	Known RBP	10.24	□□□□□ -0.77
PUM1-222	ENST00000531867	SLC24A3	Q9HC58	644 aa		10.24	□□□□□ -0.77
PUM1-222	ENST00000531867	KIAA0586	Q9BVV6	1533 aa		10.23	□□□□□ -0.77
PUM1-222	ENST00000531867	KDM4A	O75164	1064 aa		10.23	□□□□□ -0.77
PUM1-222	ENST00000531867	PUS10	Q3MIT2	529 aa	Known RBP	10.23	□□□□□ -0.77
PUM1-222	ENST00000531867	PLB1	Q6P1J6	1458 aa		10.23	□□□□□ -0.77
PUM1-222	ENST00000531867	ADH1B	P00325	375 aa		10.22	□□□□□ -0.77
PUM1-222	ENST00000531867	SSTR3	P32745	418 aa	Predicted RBP	10.22	□□□□□ -0.77
PUM1-222	ENST00000531867	REPIN1	Q9BWE0	567 aa	Known RBP	10.22	□□□□□ -0.77
PUM1-222	ENST00000531867	ABCC2	Q92887	1545 aa		10.22	□□□□□ -0.77
PUM1-222	ENST00000531867	SCUBE3	Q8IX30	993 aa		10.21	□□□□□ -0.77
PUM1-222	ENST00000531867	PARP9	Q8IXQ6	854 aa		10.21	□□□□□ -0.77
PUM1-222	ENST00000531867	ASXL2	Q76L83	1435 aa		10.21	□□□□□ -0.78
PUM1-222	ENST00000531867	TLL1	O43897	1013 aa		10.2	□□□□□ -0.78
PUM1-222	ENST00000531867	NUTM1	Q86Y26	1132 aa		10.2	□□□□□ -0.78
PUM1-222	ENST00000531867	NKX2-3	Q8TAU0	364 aa		10.2	□□□□□ -0.78
PUM1-222	ENST00000531867	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	10.2	□□□□□ -0.78
PUM1-222	ENST00000531867	MAP3K4	Q9Y6R4	1608 aa		10.2	□□□□□ -0.78
PUM1-222	ENST00000531867	PTPRG	P23470	1445 aa		10.19	□□□□□ -0.78
PUM1-222	ENST00000531867	PDE4D	Q08499	809 aa		10.19	□□□□□ -0.78
PUM1-222	ENST00000531867	PPP1R18	Q6NYC8	613 aa		10.19	□□□□□ -0.78
PUM1-222	ENST00000531867	SALL2	Q9Y467	1007 aa	Predicted RBP	10.19	□□□□□ -0.78
PUM1-222	ENST00000531867	UHRF1BP1L	A0JNW5	1464 aa		10.18	□□□□□ -0.78
PUM1-222	ENST00000531867	FMNL1	O95466	1100 aa	Predicted RBP	10.18	□□□□□ -0.78
PUM1-222	ENST00000531867		Q3C1V9	767 aa		10.18	□□□□□ -0.78
PUM1-222	ENST00000531867	SLC27A5	Q9Y2P5	690 aa		10.18	□□□□□ -0.78
PUM1-222	ENST00000531867	HOXA2	O43364	376 aa		10.17	□□□□□ -0.78
PUM1-222	ENST00000531867	SPSB2	Q99619	263 aa		10.17	□□□□□ -0.78
PUM1-222	ENST00000531867	TEX14	Q8IWB6	1497 aa		10.17	□□□□□ -0.78
PUM1-222	ENST00000531867	DIXDC1	Q155Q3	683 aa		10.16	□□□□□ -0.78
PUM1-222	ENST00000531867	EPRS	P07814	1512 aa	Known RBP	10.16	□□□□□ -0.78
PUM1-222	ENST00000531867	SLC6A16	Q9GZN6	736 aa		10.15	□□□□□ -0.78
PUM1-222	ENST00000531867	CUL7	Q14999	1698 aa		10.15	□□□□□ -0.79
PUM1-222	ENST00000531867	TNIK	Q9UKE5	1360 aa		10.14	□□□□□ -0.79
PUM1-222	ENST00000531867	THAP11	Q96EK4	314 aa		10.14	□□□□□ -0.79
PUM1-222	ENST00000531867	BEGAIN	Q9BUH8	593 aa		10.14	□□□□□ -0.79
PUM1-222	ENST00000531867	KDM5B	Q9UGL1	1544 aa		10.13	□□□□□ -0.79
PUM1-222	ENST00000531867	IGF1R	P08069	1367 aa		10.13	□□□□□ -0.79
PUM1-222	ENST00000531867	S1PR4	O95977	384 aa		10.12	□□□□□ -0.79
PUM1-222	ENST00000531867	MS4A1	P11836	297 aa		10.12	□□□□□ -0.79
PUM1-222	ENST00000531867	BRICD5	Q6PL45	260 aa		10.12	□□□□□ -0.79
PUM1-222	ENST00000531867	UACA	Q9BZF9	1416 aa		10.11	□□□□□ -0.79
PUM1-222	ENST00000531867	RNF223	E7ERA6	249 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms