RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 CLUAP1Q96AJ1 413 aa10.05□□□□□ -0.8
ATM-216ENST00000531525 TRAK2O60296 914 aa10.04□□□□□ -0.8
ATM-216ENST00000531525 CLCN1P35523 988 aa10.04□□□□□ -0.8
ATM-216ENST00000531525 TRAIPQ9BWF2 469 aa10.04□□□□□ -0.8
ATM-216ENST00000531525 RBM25P49756 843 aaKnown RBP10.03□□□□□ -0.8
ATM-216ENST00000531525 SULF1Q8IWU6 871 aa10.03□□□□□ -0.8
ATM-216ENST00000531525 RGS22Q8NE09 1264 aa10.03□□□□□ -0.8
ATM-216ENST00000531525 CFHP08603 1231 aa10.02□□□□□ -0.8
ATM-216ENST00000531525 FANCD2Q9BXW9 1451 aa10.02□□□□□ -0.8
ATM-216ENST00000531525 TTBK1Q5TCY1 1321 aaPredicted RBP10.02□□□□□ -0.81
ATM-216ENST00000531525 TMCO4Q5TGY1 634 aa10.02□□□□□ -0.81
ATM-216ENST00000531525 RDH13Q8NBN7 331 aa10.02□□□□□ -0.81
ATM-216ENST00000531525 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
ATM-216ENST00000531525 CD46P15529 392 aa10.01□□□□□ -0.81
ATM-216ENST00000531525 TTLL12Q14166 644 aaPredicted RBP10.01□□□□□ -0.81
ATM-216ENST00000531525 FOXD4L5Q5VV16 416 aaPredicted RBP10.01□□□□□ -0.81
ATM-216ENST00000531525 PARP9Q8IXQ6 854 aa10.01□□□□□ -0.81
ATM-216ENST00000531525 FOXD4L4Q8WXT5 416 aaPredicted RBP10.01□□□□□ -0.81
ATM-216ENST00000531525 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
ATM-216ENST00000531525 PRDM2Q13029 1718 aa10□□□□□ -0.81
ATM-216ENST00000531525 ACTN4O43707 911 aaKnown RBP9.99□□□□□ -0.81
ATM-216ENST00000531525 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
ATM-216ENST00000531525 KMT5BQ4FZB7 885 aa9.99□□□□□ -0.81
ATM-216ENST00000531525 GIGYF2Q6Y7W6 1299 aaKnown RBP9.99□□□□□ -0.81
ATM-216ENST00000531525 ZNF428Q96B54 188 aa9.99□□□□□ -0.81
ATM-216ENST00000531525 PRR14Q9BWN1 585 aa9.99□□□□□ -0.81
ATM-216ENST00000531525 A6NJR5 290 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 GCGRP47871 477 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 GZF1Q9H116 711 aaPredicted RBP9.98□□□□□ -0.81
ATM-216ENST00000531525 PLA2G2EQ9NZK7 142 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 CFTRP13569 1480 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 RIMBP3CA6NJZ7 1639 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 RIMBP3BA6NNM3 1639 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 RIMBP3Q9UFD9 1639 aa9.98□□□□□ -0.81
ATM-216ENST00000531525 TJAP1Q5JTD0 557 aa9.97□□□□□ -0.81
ATM-216ENST00000531525 URB2Q14146 1524 aaKnown RBP9.97□□□□□ -0.81
ATM-216ENST00000531525 SSTR3P32745 418 aaPredicted RBP9.97□□□□□ -0.81
ATM-216ENST00000531525 MTRQ99707 1265 aa9.97□□□□□ -0.81
ATM-216ENST00000531525 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
ATM-216ENST00000531525 MFAP1P55081 439 aaKnown RBP9.96□□□□□ -0.82
ATM-216ENST00000531525 PCDHB3Q9Y5E6 796 aa9.96□□□□□ -0.82
ATM-216ENST00000531525 PLEKHG3A1L390 1219 aa9.94□□□□□ -0.82
ATM-216ENST00000531525 FUT2Q10981 343 aa9.94□□□□□ -0.82
ATM-216ENST00000531525 MS4A1P11836 297 aa9.93□□□□□ -0.82
ATM-216ENST00000531525 COPS2P61201 443 aa9.93□□□□□ -0.82
ATM-216ENST00000531525 IFFO2Q5TF58 517 aa9.93□□□□□ -0.82
ATM-216ENST00000531525 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
ATM-216ENST00000531525 CCDC97Q96F63 343 aaPredicted RBP9.93□□□□□ -0.82
ATM-216ENST00000531525 DDRGK1Q96HY6 314 aa9.93□□□□□ -0.82
ATM-216ENST00000531525 TOP2AP11388 1531 aaKnown RBP9.93□□□□□ -0.82
ATM-216ENST00000531525 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
ATM-216ENST00000531525 IL21Q9HBE4 155 aa9.92□□□□□ -0.82
ATM-216ENST00000531525 HMGB1P09429 215 aaKnown RBP9.92□□□□□ -0.82
ATM-216ENST00000531525 KCNC4Q03721 635 aa9.92□□□□□ -0.82
ATM-216ENST00000531525 PUS10Q3MIT2 529 aaKnown RBP9.92□□□□□ -0.82
ATM-216ENST00000531525 CDK11BP21127 795 aaKnown RBP9.91□□□□□ -0.82
ATM-216ENST00000531525 CDK11AQ9UQ88 783 aaPredicted RBP9.91□□□□□ -0.82
ATM-216ENST00000531525 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
ATM-216ENST00000531525 EIF5BO60841 1220 aaKnown RBP9.9□□□□□ -0.82
ATM-216ENST00000531525 KDM4AO75164 1064 aa9.9□□□□□ -0.82
ATM-216ENST00000531525 ATP6V1AP38606 617 aa9.9□□□□□ -0.82
ATM-216ENST00000531525 ZPR1O75312 459 aa9.89□□□□□ -0.83
ATM-216ENST00000531525 MORN1Q5T089 497 aa9.89□□□□□ -0.83
ATM-216ENST00000531525 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
ATM-216ENST00000531525 SERPINA10Q9UK55 444 aa9.88□□□□□ -0.83
ATM-216ENST00000531525 SCUBE3Q8IX30 993 aa9.87□□□□□ -0.83
ATM-216ENST00000531525 RETREG2Q8NC44 543 aa9.87□□□□□ -0.83
ATM-216ENST00000531525 ZNF608Q9ULD9 1512 aaPredicted RBP9.87□□□□□ -0.83
ATM-216ENST00000531525 EIF4G3O43432 1585 aaKnown RBP9.87□□□□□ -0.83
ATM-216ENST00000531525 NKX2-3Q8TAU0 364 aa9.87□□□□□ -0.83
ATM-216ENST00000531525 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 HOXA2O43364 376 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 NR1I2O75469 434 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 USP46P62068 366 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 HLA-CQ95604 372 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 SLC27A5Q9Y2P5 690 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 CHD1O14646 1710 aa9.86□□□□□ -0.83
ATM-216ENST00000531525 E9PSI1 815 aa9.85□□□□□ -0.83
ATM-216ENST00000531525 TLL1O43897 1013 aa9.85□□□□□ -0.83
ATM-216ENST00000531525 HSP90B1P14625 803 aaKnown RBP9.85□□□□□ -0.83
ATM-216ENST00000531525 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
ATM-216ENST00000531525 NUTM1Q86Y26 1132 aa9.85□□□□□ -0.83
ATM-216ENST00000531525 RSF1Q96T23 1441 aaPredicted RBP9.84□□□□□ -0.83
ATM-216ENST00000531525 GRIPAP1Q4V328 841 aa9.84□□□□□ -0.83
ATM-216ENST00000531525 A0A0G2JS52 829 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 IRF5Q13568 498 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 THAP11Q96EK4 314 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 TOPBP1Q92547 1522 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 GUCA2AQ02747 115 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 TBC1D2Q9BYX2 928 aa9.82□□□□□ -0.84
ATM-216ENST00000531525 PCMTD1Q96MG8 357 aaPredicted RBP9.81□□□□□ -0.84
ATM-216ENST00000531525 MOXD2PA6NHM9 499 aa9.8□□□□□ -0.84
ATM-216ENST00000531525 MCM6Q14566 821 aa9.8□□□□□ -0.84
ATM-216ENST00000531525 RNF19BQ6ZMZ0 732 aa9.8□□□□□ -0.84
ATM-216ENST00000531525 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
ATM-216ENST00000531525 DNMBPQ6XZF7 1577 aa9.79□□□□□ -0.84
ATM-216ENST00000531525 ADH1BP00325 375 aa9.79□□□□□ -0.84
ATM-216ENST00000531525 NDUFV2P19404 249 aa9.79□□□□□ -0.84
ATM-216ENST00000531525 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms