RNA–Protein interactions for RNA: ENST00000531484.5

RELA-217, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 2

Gene RELA, Length 2,251 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-217ENST00000531484 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
RELA-217ENST00000531484 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
RELA-217ENST00000531484 CC2D1BQ5T0F9 858 aaKnown RBP13.81□□□□□ -0.2
RELA-217ENST00000531484 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
RELA-217ENST00000531484 RPGRIP1LQ68CZ1 1315 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 NCKAP5LQ9HCH0 1330 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 CDCA8Q53HL2 280 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 STK26Q9P289 416 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 NRXN1Q9ULB1 1477 aa13.8□□□□□ -0.2
RELA-217ENST00000531484 THEMISQ8N1K5 641 aaPredicted RBP13.79□□□□□ -0.2
RELA-217ENST00000531484 ZBTB47Q9UFB7 747 aaPredicted RBP13.79□□□□□ -0.2
RELA-217ENST00000531484 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
RELA-217ENST00000531484 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
RELA-217ENST00000531484 TRAK1Q9UPV9 953 aa13.78□□□□□ -0.2
RELA-217ENST00000531484 RNF123Q5XPI4 1314 aa13.77□□□□□ -0.2
RELA-217ENST00000531484 METP08581 1390 aa13.77□□□□□ -0.21
RELA-217ENST00000531484 BLMP54132 1417 aaPredicted RBP13.76□□□□□ -0.21
RELA-217ENST00000531484 INSRP06213 1382 aa13.76□□□□□ -0.21
RELA-217ENST00000531484 NRXN3Q9Y4C0 1643 aa13.76□□□□□ -0.21
RELA-217ENST00000531484 SAFB2Q14151 953 aaKnown RBP eCLIP13.76□□□□□ -0.21
RELA-217ENST00000531484 ASXL1Q8IXJ9 1541 aa13.76□□□□□ -0.21
RELA-217ENST00000531484 ARHGAP23Q9P227 1491 aa13.75□□□□□ -0.21
RELA-217ENST00000531484 CCDC136Q96JN2 1154 aa13.75□□□□□ -0.21
RELA-217ENST00000531484 KNSTRNQ9Y448 316 aa13.75□□□□□ -0.21
RELA-217ENST00000531484 LMTK3Q96Q04 1460 aa13.74□□□□□ -0.21
RELA-217ENST00000531484 SLIT1O75093 1534 aa13.74□□□□□ -0.21
RELA-217ENST00000531484 ZNF142P52746 1687 aaPredicted RBP13.74□□□□□ -0.21
RELA-217ENST00000531484 SETBP1Q9Y6X0 1596 aa13.74□□□□□ -0.21
RELA-217ENST00000531484 ALKQ9UM73 1620 aa13.74□□□□□ -0.21
RELA-217ENST00000531484 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
RELA-217ENST00000531484 RTN4Q9NQC3 1192 aaKnown RBP13.74□□□□□ -0.21
RELA-217ENST00000531484 EID1Q9Y6B2 187 aa13.74□□□□□ -0.21
RELA-217ENST00000531484 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
RELA-217ENST00000531484 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
RELA-217ENST00000531484 PDE3BQ13370 1112 aa13.72□□□□□ -0.21
RELA-217ENST00000531484 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
RELA-217ENST00000531484 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.72□□□□□ -0.21
RELA-217ENST00000531484 WAPLQ7Z5K2 1190 aa13.71□□□□□ -0.21
RELA-217ENST00000531484 QRICH2Q9H0J4 1663 aa13.7□□□□□ -0.22
RELA-217ENST00000531484 PLEKHG1Q9ULL1 1385 aa13.7□□□□□ -0.22
RELA-217ENST00000531484 AMER1Q5JTC6 1135 aaPredicted RBP13.7□□□□□ -0.22
RELA-217ENST00000531484 SETD1AO15047 1707 aaKnown RBP13.69□□□□□ -0.22
RELA-217ENST00000531484 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
RELA-217ENST00000531484 PTPRUQ92729 1446 aa13.69□□□□□ -0.22
RELA-217ENST00000531484 NPC1L1Q9UHC9 1359 aa13.68□□□□□ -0.22
RELA-217ENST00000531484 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
RELA-217ENST00000531484 PPP2R1AP30153 589 aa13.68□□□□□ -0.22
RELA-217ENST00000531484 HDGFP51858 240 aaKnown RBP13.68□□□□□ -0.22
RELA-217ENST00000531484 YTHDC2Q9H6S0 1430 aaKnown RBP13.67□□□□□ -0.22
RELA-217ENST00000531484 RRP1P56182 461 aaKnown RBP13.67□□□□□ -0.22
RELA-217ENST00000531484 PRAM1Q96QH2 718 aa13.67□□□□□ -0.22
RELA-217ENST00000531484 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.67□□□□□ -0.22
RELA-217ENST00000531484 RCAN3Q9UKA8 241 aa13.67□□□□□ -0.22
RELA-217ENST00000531484 MED14O60244 1454 aa13.66□□□□□ -0.22
RELA-217ENST00000531484 WDR43Q15061 677 aaKnown RBP eCLIP13.66□□□□□ -0.22
RELA-217ENST00000531484 NEFMP07197 916 aa13.65□□□□□ -0.22
RELA-217ENST00000531484 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
RELA-217ENST00000531484 NPHP4O75161 1426 aaPredicted RBP13.65□□□□□ -0.22
RELA-217ENST00000531484 KCNA6P17658 529 aa13.65□□□□□ -0.22
RELA-217ENST00000531484 AMOTL2Q9Y2J4 779 aa13.65□□□□□ -0.22
RELA-217ENST00000531484 CENPJQ9HC77 1338 aaPredicted RBP13.64□□□□□ -0.23
RELA-217ENST00000531484 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
RELA-217ENST00000531484 NPM2Q86SE8 214 aaKnown RBP13.64□□□□□ -0.23
RELA-217ENST00000531484 USP35Q9P2H5 1018 aa13.64□□□□□ -0.23
RELA-217ENST00000531484 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
RELA-217ENST00000531484 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
RELA-217ENST00000531484 ADAMTS8Q9UP79 889 aa13.64□□□□□ -0.23
RELA-217ENST00000531484 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
RELA-217ENST00000531484 TBX22Q9Y458 520 aa13.63□□□□□ -0.23
RELA-217ENST00000531484 ARHGEF28Q8N1W1 1705 aaKnown RBP13.63□□□□□ -0.23
RELA-217ENST00000531484 POGKQ9P215 609 aa13.61□□□□□ -0.23
RELA-217ENST00000531484 NUTM2FA1L443 756 aa13.6□□□□□ -0.23
RELA-217ENST00000531484 USP32Q8NFA0 1604 aa13.59□□□□□ -0.23
RELA-217ENST00000531484 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
RELA-217ENST00000531484 PDE4AP27815 886 aa13.59□□□□□ -0.23
RELA-217ENST00000531484 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
RELA-217ENST00000531484 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
RELA-217ENST00000531484 ABCC11Q96J66 1382 aa13.58□□□□□ -0.24
RELA-217ENST00000531484 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
RELA-217ENST00000531484 CARD14Q9BXL6 1004 aa13.57□□□□□ -0.24
RELA-217ENST00000531484 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
RELA-217ENST00000531484 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
RELA-217ENST00000531484 EXOC6Q8TAG9 804 aa13.57□□□□□ -0.24
RELA-217ENST00000531484 BRPF3Q9ULD4 1205 aa13.57□□□□□ -0.24
RELA-217ENST00000531484 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
RELA-217ENST00000531484 STRCP1A6NGW2 1772 aa13.55□□□□□ -0.24
RELA-217ENST00000531484 TULP4Q9NRJ4 1543 aa13.55□□□□□ -0.24
RELA-217ENST00000531484 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.55□□□□□ -0.24
RELA-217ENST00000531484 ZNF521Q96K83 1311 aa13.54□□□□□ -0.24
RELA-217ENST00000531484 SHPRHQ149N8 1683 aa13.54□□□□□ -0.24
RELA-217ENST00000531484 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
RELA-217ENST00000531484 TECPR2O15040 1411 aa13.53□□□□□ -0.24
RELA-217ENST00000531484 MS4A1P11836 297 aa13.53□□□□□ -0.24
RELA-217ENST00000531484 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
RELA-217ENST00000531484 CDK19Q9BWU1 502 aa13.53□□□□□ -0.24
RELA-217ENST00000531484 XRN1Q8IZH2 1706 aaKnown RBP13.52□□□□□ -0.24
RELA-217ENST00000531484 CCDC146Q8IYE0 955 aa13.52□□□□□ -0.24
RELA-217ENST00000531484 POLR3AO14802 1390 aaPredicted RBP13.52□□□□□ -0.24
RELA-217ENST00000531484 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms