RNA–Protein interactions for RNA: ENST00000530839.5

MS4A6A-213, Transcript of membrane spanning 4-domains A6A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MS4A6A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6A-213ENST00000530839 PROX2Q3B8N5 592 aa11.6□□□□□ -0.55
MS4A6A-213ENST00000530839 C9orf84Q5VXU9 1444 aa11.6□□□□□ -0.55
MS4A6A-213ENST00000530839 KCNC4Q03721 635 aa11.59□□□□□ -0.55
MS4A6A-213ENST00000530839 Q6ZNB5 142 aa11.59□□□□□ -0.55
MS4A6A-213ENST00000530839 ARHGEF12Q9NZN5 1544 aa11.59□□□□□ -0.55
MS4A6A-213ENST00000530839 PREX1Q8TCU6 1659 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 ZNF518AQ6AHZ1 1483 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 CLIP1P30622 1438 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 COL9A1P20849 921 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 BCAMP50895 628 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 ZFRQ96KR1 1074 aaKnown RBP11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 LRRIQ1Q96JM4 1722 aa11.58□□□□□ -0.56
MS4A6A-213ENST00000530839 LAPTM4AQ15012 233 aa11.57□□□□□ -0.56
MS4A6A-213ENST00000530839 ARHGAP5Q13017 1502 aa11.57□□□□□ -0.56
MS4A6A-213ENST00000530839 EMILIN3Q9NT22 766 aa11.56□□□□□ -0.56
MS4A6A-213ENST00000530839 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
MS4A6A-213ENST00000530839 CDC42BPBQ9Y5S2 1711 aa11.56□□□□□ -0.56
MS4A6A-213ENST00000530839 KDM5CP41229 1560 aa11.56□□□□□ -0.56
MS4A6A-213ENST00000530839 EPAS1Q99814 870 aa11.55□□□□□ -0.56
MS4A6A-213ENST00000530839 GTPBP6O43824 516 aaPredicted RBP11.54□□□□□ -0.56
MS4A6A-213ENST00000530839 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
MS4A6A-213ENST00000530839 CERKQ8TCT0 537 aa11.54□□□□□ -0.56
MS4A6A-213ENST00000530839 WBP1LQ9NX94 342 aa11.54□□□□□ -0.56
MS4A6A-213ENST00000530839 REREQ9P2R6 1566 aa11.53□□□□□ -0.56
MS4A6A-213ENST00000530839 DIP2CQ9Y2E4 1556 aa11.53□□□□□ -0.56
MS4A6A-213ENST00000530839 CEBPAP49715 358 aaPredicted RBP11.53□□□□□ -0.56
MS4A6A-213ENST00000530839 PREX2Q70Z35 1606 aa11.52□□□□□ -0.56
MS4A6A-213ENST00000530839 MLH3Q9UHC1 1453 aa11.52□□□□□ -0.57
MS4A6A-213ENST00000530839 FAM98CQ17RN3 349 aaKnown RBP11.52□□□□□ -0.57
MS4A6A-213ENST00000530839 CCDC18Q5T9S5 1454 aa11.51□□□□□ -0.57
MS4A6A-213ENST00000530839 STRCQ7RTU9 1775 aa11.51□□□□□ -0.57
MS4A6A-213ENST00000530839 ITSN2Q9NZM3 1697 aa11.51□□□□□ -0.57
MS4A6A-213ENST00000530839 ABCA6Q8N139 1617 aa11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 UHRF1BP1Q6BDS2 1440 aa11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 CASKIN1Q8WXD9 1431 aa11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 C6orf132Q5T0Z8 1188 aa11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 TSR3Q9UJK0 312 aaKnown RBP11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 C3P01024 1663 aa11.5□□□□□ -0.57
MS4A6A-213ENST00000530839 CDC42BPAQ5VT25 1732 aa11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 ABCC1P33527 1531 aa11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 AGLP35573 1532 aa11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 TRIM6-TRIM34B2RNG4 842 aa11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.49□□□□□ -0.57
MS4A6A-213ENST00000530839 LRCH3Q96II8 777 aa11.48□□□□□ -0.57
MS4A6A-213ENST00000530839 KIDINS220Q9ULH0 1771 aa11.48□□□□□ -0.57
MS4A6A-213ENST00000530839 TRAPPC8Q9Y2L5 1435 aa11.47□□□□□ -0.57
MS4A6A-213ENST00000530839 SEPT9Q9UHD8 586 aaPredicted RBP11.46□□□□□ -0.57
MS4A6A-213ENST00000530839 HPS5Q9UPZ3 1129 aa11.45□□□□□ -0.58
MS4A6A-213ENST00000530839 FYCO1Q9BQS8 1478 aa11.45□□□□□ -0.58
MS4A6A-213ENST00000530839 PTPRTO14522 1441 aa11.44□□□□□ -0.58
MS4A6A-213ENST00000530839 CNTLNQ9NXG0 1405 aa11.44□□□□□ -0.58
MS4A6A-213ENST00000530839 SAMD9LQ8IVG5 1584 aa11.43□□□□□ -0.58
MS4A6A-213ENST00000530839 MROH2AA6NES4 1674 aa11.43□□□□□ -0.58
MS4A6A-213ENST00000530839 CAMK2BQ13554 666 aa11.42□□□□□ -0.58
MS4A6A-213ENST00000530839 ZNF777Q9ULD5 760 aaPredicted RBP11.42□□□□□ -0.58
MS4A6A-213ENST00000530839 SUPT6HQ7KZ85 1726 aaKnown RBP11.42□□□□□ -0.58
MS4A6A-213ENST00000530839 PACS2Q86VP3 889 aa11.41□□□□□ -0.58
MS4A6A-213ENST00000530839 SYCP2Q9BX26 1530 aa11.4□□□□□ -0.58
MS4A6A-213ENST00000530839 GPATCH8Q9UKJ3 1502 aaKnown RBP11.4□□□□□ -0.58
MS4A6A-213ENST00000530839 SPAG9O60271 1321 aaKnown RBP11.4□□□□□ -0.58
MS4A6A-213ENST00000530839 HNRNPMP52272 730 aaKnown RBP eCLIP11.4□□□□□ -0.59
MS4A6A-213ENST00000530839 TRAF7Q6Q0C0 670 aa11.4□□□□□ -0.59
MS4A6A-213ENST00000530839 NPATQ14207 1427 aa11.39□□□□□ -0.59
MS4A6A-213ENST00000530839 PLEKHH2Q8IVE3 1493 aa11.39□□□□□ -0.59
MS4A6A-213ENST00000530839 GFRA3O60609 400 aa11.39□□□□□ -0.59
MS4A6A-213ENST00000530839 KIAA1107Q9UPP5 1409 aa11.38□□□□□ -0.59
MS4A6A-213ENST00000530839 ATP7AQ04656 1500 aa11.38□□□□□ -0.59
MS4A6A-213ENST00000530839 CFDP1Q9UEE9 299 aaPredicted RBP11.38□□□□□ -0.59
MS4A6A-213ENST00000530839 ZMYM3Q14202 1370 aa11.38□□□□□ -0.59
MS4A6A-213ENST00000530839 NCOA1Q15788 1441 aa11.37□□□□□ -0.59
MS4A6A-213ENST00000530839 CLTCQ00610 1675 aaKnown RBP11.37□□□□□ -0.59
MS4A6A-213ENST00000530839 PPP4CP60510 307 aa11.37□□□□□ -0.59
MS4A6A-213ENST00000530839 CCNB3Q8WWL7 1395 aa11.37□□□□□ -0.59
MS4A6A-213ENST00000530839 IQSEC2Q5JU85 1478 aa11.37□□□□□ -0.59
MS4A6A-213ENST00000530839 INO80Q9ULG1 1556 aaPredicted RBP11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 CAMSAP1Q5T5Y3 1602 aa11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 LTBP4Q8N2S1 1624 aa11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 A2MP01023 1474 aa11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 ADGBQ8N7X0 1667 aa11.36□□□□□ -0.59
MS4A6A-213ENST00000530839 DPYSL4O14531 572 aa11.35□□□□□ -0.59
MS4A6A-213ENST00000530839 PLXNC1O60486 1568 aa11.35□□□□□ -0.59
MS4A6A-213ENST00000530839 SLC24A1O60721 1099 aa11.35□□□□□ -0.59
MS4A6A-213ENST00000530839 MTUS2Q5JR59 1369 aa11.35□□□□□ -0.59
MS4A6A-213ENST00000530839 ZNF142P52746 1687 aaPredicted RBP11.34□□□□□ -0.59
MS4A6A-213ENST00000530839 DISP3Q9P2K9 1392 aa11.34□□□□□ -0.59
MS4A6A-213ENST00000530839 NRG2O14511 850 aaPredicted RBP11.34□□□□□ -0.59
MS4A6A-213ENST00000530839 CADPS2Q86UW7 1296 aa11.34□□□□□ -0.59
MS4A6A-213ENST00000530839 GGT6Q6P531 493 aa11.33□□□□□ -0.6
MS4A6A-213ENST00000530839 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
MS4A6A-213ENST00000530839 V9GY48 417 aaPredicted RBP11.33□□□□□ -0.6
MS4A6A-213ENST00000530839 MYO3AQ8NEV4 1616 aa11.33□□□□□ -0.6
MS4A6A-213ENST00000530839 EN1Q05925 392 aaPredicted RBP11.32□□□□□ -0.6
MS4A6A-213ENST00000530839 TJAP1Q5JTD0 557 aa11.32□□□□□ -0.6
MS4A6A-213ENST00000530839 DDX12PQ92771 950 aa11.31□□□□□ -0.6
MS4A6A-213ENST00000530839 PRKD2Q9BZL6 878 aa11.31□□□□□ -0.6
MS4A6A-213ENST00000530839 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms