RNA–Protein interactions for RNA: ENST00000530701.1

FGFR1-235, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 276 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-235ENST00000530701 CFAP70Q5T0N1 1121 aa3.42□□□□□ -1.86
FGFR1-235ENST00000530701 FOXD4L5Q5VV16 416 aaPredicted RBP3.42□□□□□ -1.86
FGFR1-235ENST00000530701 FOXD4L4Q8WXT5 416 aaPredicted RBP3.42□□□□□ -1.86
FGFR1-235ENST00000530701 GJD4Q96KN9 370 aaPredicted RBP3.42□□□□□ -1.86
FGFR1-235ENST00000530701 FAM198AQ9UFP1 575 aa3.42□□□□□ -1.86
FGFR1-235ENST00000530701 RNF40O75150 1001 aa3.41□□□□□ -1.86
FGFR1-235ENST00000530701 KCNK17Q96T54 332 aa3.41□□□□□ -1.86
FGFR1-235ENST00000530701 VRTNQ9H8Y1 702 aa3.41□□□□□ -1.86
FGFR1-235ENST00000530701 HMX1Q9NP08 348 aaPredicted RBP3.41□□□□□ -1.86
FGFR1-235ENST00000530701 TFIP11Q9UBB9 837 aaKnown RBP3.41□□□□□ -1.86
FGFR1-235ENST00000530701 SNPHO15079 494 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 ATG7O95352 703 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 GUCA2AQ02747 115 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 PROX2Q3B8N5 592 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 SWT1Q5T5J6 900 aaKnown RBP3.4□□□□□ -1.87
FGFR1-235ENST00000530701 GPR153Q6NV75 609 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 SND1Q7KZF4 910 aaKnown RBP eCLIP3.4□□□□□ -1.87
FGFR1-235ENST00000530701 SLF2Q8IX21 1173 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 ADAMTS19Q8TE59 1207 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 LRRN4Q8WUT4 740 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 ZNF592Q92610 1267 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 KIAA1468Q9P260 1216 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 IVNS1ABPQ9Y6Y0 642 aa3.4□□□□□ -1.87
FGFR1-235ENST00000530701 CFHP08603 1231 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 ATP6V1AP38606 617 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 FUT2Q10981 343 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 Q3C1V9 767 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 KMT5BQ4FZB7 885 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 CDCA8Q53HL2 280 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 MAMSTRQ6ZN01 415 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 PRR7Q8TB68 274 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 CCER1Q8TC90 406 aaPredicted RBP3.39□□□□□ -1.87
FGFR1-235ENST00000530701 TRIM34Q9BYJ4 488 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 ALG2Q9H553 416 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 SCUBE2Q9NQ36 999 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 PCDHGC3Q9UN70 934 aa3.39□□□□□ -1.87
FGFR1-235ENST00000530701 CFAP99D6REC4 459 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 C3orf80F5H4A9 247 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 ATP9BO43861 1147 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 HOXB3P14651 431 aaPredicted RBP3.38□□□□□ -1.87
FGFR1-235ENST00000530701 NR6A1Q15406 480 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 RETREG3Q86VR2 466 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 RABGEF1Q9UJ41 708 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 AMOTL2Q9Y2J4 779 aa3.38□□□□□ -1.87
FGFR1-235ENST00000530701 MAFBQ9Y5Q3 323 aaPredicted RBP3.38□□□□□ -1.87
FGFR1-235ENST00000530701 CARNS1A5YM72 827 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 SLC10A3P09131 477 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 NR1H3Q13133 447 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 FAM98CQ17RN3 349 aaKnown RBP3.37□□□□□ -1.87
FGFR1-235ENST00000530701 EPS8L1Q8TE68 723 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 HLA-CQ95604 372 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 PRR14Q9BWN1 585 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 NBPF3Q9H094 633 aa3.37□□□□□ -1.87
FGFR1-235ENST00000530701 SEPT9Q9UHD8 586 aaPredicted RBP3.37□□□□□ -1.87
FGFR1-235ENST00000530701 SHROOM4Q9ULL8 1493 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 ZBBXA8MT70 800 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 SKIP12755 728 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 SRPK2P78362 688 aaKnown RBP3.36□□□□□ -1.87
FGFR1-235ENST00000530701 SLFNL1Q499Z3 407 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 DESI1Q6ICB0 168 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 LARP1Q6PKG0 1096 aaKnown RBP3.36□□□□□ -1.87
FGFR1-235ENST00000530701 TBC1D9Q6ZT07 1266 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 NFATC2IPQ8NCF5 419 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 ZNF428Q96B54 188 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 UCN2Q96RP3 112 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 ZBED2Q9BTP6 218 aa3.36□□□□□ -1.87
FGFR1-235ENST00000530701 NOVA2Q9UNW9 492 aaKnown RBP3.36□□□□□ -1.87
FGFR1-235ENST00000530701 RBM19Q9Y4C8 960 aaKnown RBP3.36□□□□□ -1.87
FGFR1-235ENST00000530701 USP17L3A6NCW0 530 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 USP17L4A6NCW7 530 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 TMEM88BA6NKF7 163 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 GPR37L1O60883 481 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 HOXB1P14653 301 aaPredicted RBP3.35□□□□□ -1.87
FGFR1-235ENST00000530701 ERCC3P19447 782 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 ARID4AP29374 1257 aaPredicted RBP3.35□□□□□ -1.87
FGFR1-235ENST00000530701 ELOAQ14241 798 aaKnown RBP3.35□□□□□ -1.87
FGFR1-235ENST00000530701 USP17L2Q6R6M4 530 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 USP17L1Q7RTZ2 530 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 SAMD7Q7Z3H4 446 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 SYMPKQ92797 1274 aaKnown RBP3.35□□□□□ -1.87
FGFR1-235ENST00000530701 BCL11AQ9H165 835 aa3.35□□□□□ -1.87
FGFR1-235ENST00000530701 GNEQ9Y223 722 aaKnown RBP3.35□□□□□ -1.87
FGFR1-235ENST00000530701 USP17L5A8MUK1 530 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 ATP5J2-PTCD1G3V325 749 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 ARHGAP33O14559 1287 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 PER1O15534 1290 aaPredicted RBP3.34□□□□□ -1.87
FGFR1-235ENST00000530701 POTEIP0CG38 1075 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 CTHP32929 405 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 LAPTM4BQ86VI4 370 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 ARMC2Q8NEN0 867 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 FAM200AQ8TCP9 573 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 LRCH3Q96II8 777 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 STAC3Q96MF2 364 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 FKBPLQ9UIM3 349 aa3.34□□□□□ -1.87
FGFR1-235ENST00000530701 ZC3H4Q9UPT8 1303 aaKnown RBP3.34□□□□□ -1.87
FGFR1-235ENST00000530701 FAM196BA6NMK8 535 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L15C9J2P7 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L10C9JJH3 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L13C9JLJ4 530 aa3.33□□□□□ -1.88
FGFR1-235ENST00000530701 USP17L12C9JPN9 530 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms