RNA–Protein interactions for RNA: ENST00000529724.1

PPP1CA-206, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 2

Gene PPP1CA, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-206ENST00000529724 UNC5CLQ8IV45 518 aa16.64■□□□□ 0.25
PPP1CA-206ENST00000529724 SEPT12Q8IYM1 358 aa16.64■□□□□ 0.25
PPP1CA-206ENST00000529724 BAG6P46379 1132 aa16.61■□□□□ 0.25
PPP1CA-206ENST00000529724 R3HDM1Q15032 1099 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-206ENST00000529724 PXDNQ92626 1479 aa16.61■□□□□ 0.25
PPP1CA-206ENST00000529724 E9PCH4 1651 aa16.59■□□□□ 0.25
PPP1CA-206ENST00000529724 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
PPP1CA-206ENST00000529724 KRT27Q7Z3Y8 459 aa16.58■□□□□ 0.24
PPP1CA-206ENST00000529724 ADGRL2O95490 1459 aa16.58■□□□□ 0.24
PPP1CA-206ENST00000529724 ANKRD50Q9ULJ7 1429 aa16.57■□□□□ 0.24
PPP1CA-206ENST00000529724 EN1Q05925 392 aaPredicted RBP16.56■□□□□ 0.24
PPP1CA-206ENST00000529724 IQGAP3Q86VI3 1631 aa16.56■□□□□ 0.24
PPP1CA-206ENST00000529724 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
PPP1CA-206ENST00000529724 VPS8Q8N3P4 1428 aa16.54■□□□□ 0.24
PPP1CA-206ENST00000529724 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
PPP1CA-206ENST00000529724 XPCQ01831 940 aaPredicted RBP16.54■□□□□ 0.24
PPP1CA-206ENST00000529724 VPS72Q15906 364 aa16.54■□□□□ 0.24
PPP1CA-206ENST00000529724 DISP2A7MBM2 1401 aa16.52■□□□□ 0.23
PPP1CA-206ENST00000529724 USP32Q8NFA0 1604 aa16.52■□□□□ 0.23
PPP1CA-206ENST00000529724 FOXO3O43524 673 aa16.5■□□□□ 0.23
PPP1CA-206ENST00000529724 PRAG1Q86YV5 1406 aa16.5■□□□□ 0.23
PPP1CA-206ENST00000529724 RGPD1P0DJD0 1748 aa16.49■□□□□ 0.23
PPP1CA-206ENST00000529724 ESCO1Q5FWF5 840 aa16.49■□□□□ 0.23
PPP1CA-206ENST00000529724 TNS1Q9HBL0 1735 aaKnown RBP16.47■□□□□ 0.23
PPP1CA-206ENST00000529724 NEXMIFQ5QGS0 1516 aa16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 NWD2Q9ULI1 1742 aa16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 SENP3-EIF4A1A0A087X0R7 540 aa16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 CCDC9Q9Y3X0 531 aaKnown RBP16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 PLCH1Q4KWH8 1693 aa16.46■□□□□ 0.23
PPP1CA-206ENST00000529724 SPATA31A3Q5VYP0 1347 aa16.45■□□□□ 0.22
PPP1CA-206ENST00000529724 ZNF326Q5BKZ1 582 aaKnown RBP16.45■□□□□ 0.22
PPP1CA-206ENST00000529724 FAM182BQ5T319 152 aa16.44■□□□□ 0.22
PPP1CA-206ENST00000529724 ZNF784Q8NCA9 323 aaPredicted RBP16.44■□□□□ 0.22
PPP1CA-206ENST00000529724 HFM1A2PYH4 1435 aa16.44■□□□□ 0.22
PPP1CA-206ENST00000529724 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
PPP1CA-206ENST00000529724 LRPPRCP42704 1394 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-206ENST00000529724 A0A0G2JS52 829 aa16.42■□□□□ 0.22
PPP1CA-206ENST00000529724 MYT1Q01538 1121 aa16.42■□□□□ 0.22
PPP1CA-206ENST00000529724 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
PPP1CA-206ENST00000529724 NINLQ9Y2I6 1382 aa16.41■□□□□ 0.22
PPP1CA-206ENST00000529724 UTRNP46939 3433 aa16.4■□□□□ 0.22
PPP1CA-206ENST00000529724 CAMTA1Q9Y6Y1 1673 aa16.4■□□□□ 0.22
PPP1CA-206ENST00000529724 CABLES1Q8TDN4 633 aa16.39■□□□□ 0.21
PPP1CA-206ENST00000529724 NRAPQ86VF7 1730 aa16.38■□□□□ 0.21
PPP1CA-206ENST00000529724 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
PPP1CA-206ENST00000529724 C1QTNF8P60827 252 aa16.37■□□□□ 0.21
PPP1CA-206ENST00000529724 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
PPP1CA-206ENST00000529724 CCDC144AA2RUR9 1427 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 NAIPQ13075 1403 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 ABCA3Q99758 1704 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 NUTM2FA1L443 756 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 FAM83GA6ND36 823 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 PPP1R1BQ9UD71 204 aaPredicted RBP16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 NUP155O75694 1391 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 PARD3Q8TEW0 1356 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 TNS3Q68CZ2 1445 aa16.36■□□□□ 0.21
PPP1CA-206ENST00000529724 RREB1Q92766 1687 aa16.35■□□□□ 0.21
PPP1CA-206ENST00000529724 THSD7AQ9UPZ6 1657 aa16.35■□□□□ 0.21
PPP1CA-206ENST00000529724 HAP1P54257 671 aaPredicted RBP16.35■□□□□ 0.21
PPP1CA-206ENST00000529724 NUP188Q5SRE5 1749 aa16.34■□□□□ 0.21
PPP1CA-206ENST00000529724 KRT28Q7Z3Y7 464 aa16.34■□□□□ 0.21
PPP1CA-206ENST00000529724 SPON1Q9HCB6 807 aa16.34■□□□□ 0.21
PPP1CA-206ENST00000529724 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
PPP1CA-206ENST00000529724 KCNQ2O43526 872 aa16.33■□□□□ 0.2
PPP1CA-206ENST00000529724 CEP350Q5VT06 3117 aa16.33■□□□□ 0.2
PPP1CA-206ENST00000529724 KIF1AQ12756 1690 aa16.33■□□□□ 0.2
PPP1CA-206ENST00000529724 TRIM37O94972 964 aa16.32■□□□□ 0.2
PPP1CA-206ENST00000529724 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
PPP1CA-206ENST00000529724 SPATA31A5Q5VU36 1347 aa16.3■□□□□ 0.2
PPP1CA-206ENST00000529724 SPATA31A7Q8IWB4 1347 aa16.3■□□□□ 0.2
PPP1CA-206ENST00000529724 APBA3O96018 575 aa16.3■□□□□ 0.2
PPP1CA-206ENST00000529724 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
PPP1CA-206ENST00000529724 BTG4Q9NY30 223 aa16.29■□□□□ 0.2
PPP1CA-206ENST00000529724 FMN2Q9NZ56 1722 aa16.28■□□□□ 0.2
PPP1CA-206ENST00000529724 SBNO1A3KN83 1393 aa16.27■□□□□ 0.2
PPP1CA-206ENST00000529724 VGFO15240 615 aaPredicted RBP16.27■□□□□ 0.2
PPP1CA-206ENST00000529724 NBPF8Q3BBV2 869 aa16.27■□□□□ 0.2
PPP1CA-206ENST00000529724 NBPF14Q5TI25 921 aa16.27■□□□□ 0.2
PPP1CA-206ENST00000529724 WAPLQ7Z5K2 1190 aa16.27■□□□□ 0.2
PPP1CA-206ENST00000529724 FAM196AQ6ZSG2 479 aa16.26■□□□□ 0.19
PPP1CA-206ENST00000529724 TECPR2O15040 1411 aa16.26■□□□□ 0.19
PPP1CA-206ENST00000529724 ARHGEF10O15013 1369 aa16.26■□□□□ 0.19
PPP1CA-206ENST00000529724 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
PPP1CA-206ENST00000529724 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
PPP1CA-206ENST00000529724 COL14A1Q05707 1796 aaKnown RBP16.24■□□□□ 0.19
PPP1CA-206ENST00000529724 PSME1Q06323 249 aa16.24■□□□□ 0.19
PPP1CA-206ENST00000529724 NRKQ7Z2Y5 1582 aa16.24■□□□□ 0.19
PPP1CA-206ENST00000529724 KIF1BO60333 1816 aa16.24■□□□□ 0.19
PPP1CA-206ENST00000529724 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
PPP1CA-206ENST00000529724 LMOD2Q6P5Q4 547 aa16.23■□□□□ 0.19
PPP1CA-206ENST00000529724 PHF8Q9UPP1 1060 aa16.23■□□□□ 0.19
PPP1CA-206ENST00000529724 NRXN1Q9ULB1 1477 aa16.22■□□□□ 0.19
PPP1CA-206ENST00000529724 CHD4Q14839 1912 aa16.2■□□□□ 0.18
PPP1CA-206ENST00000529724 RGPD8O14715 1765 aaPredicted RBP16.2■□□□□ 0.18
PPP1CA-206ENST00000529724 CASZ1Q86V15 1759 aa16.2■□□□□ 0.18
PPP1CA-206ENST00000529724 SPATA31A1Q5TZJ5 1347 aa16.19■□□□□ 0.18
PPP1CA-206ENST00000529724 MYOM1P52179 1685 aa16.19■□□□□ 0.18
PPP1CA-206ENST00000529724 STK26Q9P289 416 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms