RNA–Protein interactions for RNA: ENST00000529371.5

LTBP3-213, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-213ENST00000529371 SAFB2Q14151 953 aaKnown RBP eCLIP35.32■■■■□ 3.24
LTBP3-213ENST00000529371 UBAP1LF5GYI3 381 aa35.31■■■■□ 3.24
LTBP3-213ENST00000529371 TOM1O60784 492 aa35.31■■■■□ 3.24
LTBP3-213ENST00000529371 ATF3P18847 181 aa35.31■■■■□ 3.24
LTBP3-213ENST00000529371 DCCP43146 1447 aa35.3■■■■□ 3.24
LTBP3-213ENST00000529371 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.29■■■■□ 3.24
LTBP3-213ENST00000529371 CADPS2Q86UW7 1296 aa35.27■■■■□ 3.24
LTBP3-213ENST00000529371 CENPJQ9HC77 1338 aaPredicted RBP35.25■■■■□ 3.23
LTBP3-213ENST00000529371 CDC42BPGQ6DT37 1551 aa35.22■■■■□ 3.23
LTBP3-213ENST00000529371 MINK1Q8N4C8 1332 aaPredicted RBP35.21■■■■□ 3.23
LTBP3-213ENST00000529371 SCAF1Q9H7N4 1312 aaKnown RBP35.19■■■■□ 3.22
LTBP3-213ENST00000529371 QRICH2Q9H0J4 1663 aa35.17■■■■□ 3.22
LTBP3-213ENST00000529371 ADGRB2O60241 1585 aa35.17■■■■□ 3.22
LTBP3-213ENST00000529371 FBXO41Q8TF61 875 aa35.16■■■■□ 3.22
LTBP3-213ENST00000529371 PIP4K2BP78356 416 aa35.15■■■■□ 3.22
LTBP3-213ENST00000529371 HIRIP3Q9BW71 556 aaPredicted RBP35.15■■■■□ 3.22
LTBP3-213ENST00000529371 USP47Q96K76 1375 aa35.13■■■■□ 3.21
LTBP3-213ENST00000529371 SLAIN2Q9P270 581 aa35.13■■■■□ 3.21
LTBP3-213ENST00000529371 MST1RQ04912 1400 aa35.11■■■■□ 3.21
LTBP3-213ENST00000529371 FMN2Q9NZ56 1722 aa35.09■■■■□ 3.21
LTBP3-213ENST00000529371 WASLO00401 505 aaPredicted RBP35.06■■■■□ 3.2
LTBP3-213ENST00000529371 NUTM2FA1L443 756 aa35.05■■■■□ 3.2
LTBP3-213ENST00000529371 C1orf167Q5SNV9 1468 aa35.04■■■■□ 3.2
LTBP3-213ENST00000529371 SBNO2Q9Y2G9 1366 aa35.03■■■■□ 3.2
LTBP3-213ENST00000529371 ZEB1P37275 1124 aaPredicted RBP35.03■■■■□ 3.2
LTBP3-213ENST00000529371 ST20-MTHFSA0A0A6YYL1 179 aa35.02■■■■□ 3.2
LTBP3-213ENST00000529371 EVC2Q86UK5 1308 aa35.02■■■■□ 3.2
LTBP3-213ENST00000529371 ROBO1Q9Y6N7 1651 aa35.01■■■■□ 3.19
LTBP3-213ENST00000529371 TULP4Q9NRJ4 1543 aa35.01■■■■□ 3.19
LTBP3-213ENST00000529371 ANKARQ7Z5J8 1434 aa35■■■■□ 3.19
LTBP3-213ENST00000529371 EIF4G2P78344 907 aaKnown RBP eCLIP35■■■■□ 3.19
LTBP3-213ENST00000529371 CDK19Q9BWU1 502 aa35■■■■□ 3.19
LTBP3-213ENST00000529371 SLC24A1O60721 1099 aa34.98■■■■□ 3.19
LTBP3-213ENST00000529371 SRPK2P78362 688 aaKnown RBP34.98■■■■□ 3.19
LTBP3-213ENST00000529371 ESCO1Q5FWF5 840 aa34.96■■■■□ 3.19
LTBP3-213ENST00000529371 BRINP3Q76B58 766 aa34.95■■■■□ 3.19
LTBP3-213ENST00000529371 ORAI2Q96SN7 254 aa34.92■■■■□ 3.18
LTBP3-213ENST00000529371 NUDT16Q96DE0 195 aaKnown RBP34.9■■■■□ 3.18
LTBP3-213ENST00000529371 TESK2Q96S53 571 aa34.9■■■■□ 3.18
LTBP3-213ENST00000529371 CABP2Q9NPB3 220 aa34.9■■■■□ 3.18
LTBP3-213ENST00000529371 USP32Q8NFA0 1604 aa34.9■■■■□ 3.18
LTBP3-213ENST00000529371 ATP7BP35670 1465 aa34.9■■■■□ 3.18
LTBP3-213ENST00000529371 HSPA5P11021 654 aaKnown RBP34.89■■■■□ 3.18
LTBP3-213ENST00000529371 ITSN1Q15811 1721 aa34.89■■■■□ 3.18
LTBP3-213ENST00000529371 PRR36Q9H6K5 1346 aa34.88■■■■□ 3.17
LTBP3-213ENST00000529371 RGPD8O14715 1765 aaPredicted RBP34.88■■■■□ 3.17
LTBP3-213ENST00000529371 KIF1AQ12756 1690 aa34.88■■■■□ 3.17
LTBP3-213ENST00000529371 TMF1P82094 1093 aa34.87■■■■□ 3.17
LTBP3-213ENST00000529371 PHF8Q9UPP1 1060 aa34.86■■■■□ 3.17
LTBP3-213ENST00000529371 ATAD2Q6PL18 1390 aa34.84■■■■□ 3.17
LTBP3-213ENST00000529371 ILDR1Q86SU0 546 aaPredicted RBP34.83■■■■□ 3.17
LTBP3-213ENST00000529371 CCDC61Q9Y6R9 512 aa34.83■■■■□ 3.17
LTBP3-213ENST00000529371 AHDC1Q5TGY3 1603 aaPredicted RBP34.82■■■■□ 3.16
LTBP3-213ENST00000529371 NHSL1Q5SYE7 1610 aa34.81■■■■□ 3.16
LTBP3-213ENST00000529371 NPHP3Q7Z494 1330 aa34.81■■■■□ 3.16
LTBP3-213ENST00000529371 TOPAZ1Q8N9V7 1692 aa34.8■■■■□ 3.16
LTBP3-213ENST00000529371 HSPA1LP34931 641 aa34.8■■■■□ 3.16
LTBP3-213ENST00000529371 CDCA8Q53HL2 280 aa34.8■■■■□ 3.16
LTBP3-213ENST00000529371 PHLPP1O60346 1717 aa34.8■■■■□ 3.16
LTBP3-213ENST00000529371 PMFBP1Q8TBY8 1022 aa34.79■■■■□ 3.16
LTBP3-213ENST00000529371 PPIP5K1Q6PFW1 1433 aa34.78■■■■□ 3.16
LTBP3-213ENST00000529371 DISP3Q9P2K9 1392 aa34.77■■■■□ 3.16
LTBP3-213ENST00000529371 FOXO3O43524 673 aa34.77■■■■□ 3.16
LTBP3-213ENST00000529371 NGDNQ8NEJ9 315 aaKnown RBP34.76■■■■□ 3.16
LTBP3-213ENST00000529371 PUS7Q96PZ0 661 aaKnown RBP34.76■■■■□ 3.16
LTBP3-213ENST00000529371 DDX17Q92841 729 aaKnown RBP34.74■■■■□ 3.15
LTBP3-213ENST00000529371 PLEKHG3A1L390 1219 aa34.7■■■■□ 3.15
LTBP3-213ENST00000529371 PSME1Q06323 249 aa34.7■■■■□ 3.15
LTBP3-213ENST00000529371 CABP1Q9NZU7 370 aa34.7■■■■□ 3.15
LTBP3-213ENST00000529371 COL16A1Q07092 1604 aaPredicted RBP34.7■■■■□ 3.14
LTBP3-213ENST00000529371 TMC1Q8TDI8 760 aa34.69■■■■□ 3.14
LTBP3-213ENST00000529371 XPCQ01831 940 aaPredicted RBP34.68■■■■□ 3.14
LTBP3-213ENST00000529371 ACEP12821 1306 aa34.67■■■■□ 3.14
LTBP3-213ENST00000529371 SOS2Q07890 1332 aaPredicted RBP34.67■■■■□ 3.14
LTBP3-213ENST00000529371 KRT28Q7Z3Y7 464 aa34.66■■■■□ 3.14
LTBP3-213ENST00000529371 PXDNQ92626 1479 aa34.65■■■■□ 3.14
LTBP3-213ENST00000529371 POLR3AO14802 1390 aaPredicted RBP34.65■■■■□ 3.14
LTBP3-213ENST00000529371 NINLQ9Y2I6 1382 aa34.65■■■■□ 3.14
LTBP3-213ENST00000529371 POLR3GLQ9BT43 218 aa34.65■■■■□ 3.14
LTBP3-213ENST00000529371 LRRC59Q96AG4 307 aaKnown RBP34.64■■■■□ 3.14
LTBP3-213ENST00000529371 JCADQ9P266 1359 aa34.59■■■■□ 3.13
LTBP3-213ENST00000529371 HDGFL2Q7Z4V5 671 aaPredicted RBP34.58■■■■□ 3.13
LTBP3-213ENST00000529371 SLC12A5Q9H2X9 1139 aa34.57■■■■□ 3.12
LTBP3-213ENST00000529371 TERF2IPQ9NYB0 399 aa34.57■■■■□ 3.12
LTBP3-213ENST00000529371 SBNO1A3KN83 1393 aa34.57■■■■□ 3.12
LTBP3-213ENST00000529371 ZNF692Q9BU19 519 aaPredicted RBP34.56■■■■□ 3.12
LTBP3-213ENST00000529371 PAK3O75914 559 aaPredicted RBP34.55■■■■□ 3.12
LTBP3-213ENST00000529371 TNS3Q68CZ2 1445 aa34.55■■■■□ 3.12
LTBP3-213ENST00000529371 AKAP12Q02952 1782 aa34.54■■■■□ 3.12
LTBP3-213ENST00000529371 USP6P35125 1406 aa34.53■■■■□ 3.12
LTBP3-213ENST00000529371 SPATA31A3Q5VYP0 1347 aa34.53■■■■□ 3.12
LTBP3-213ENST00000529371 BRD4O60885 1362 aaPredicted RBP34.52■■■■□ 3.12
LTBP3-213ENST00000529371 KTN1Q86UP2 1357 aaKnown RBP34.52■■■■□ 3.12
LTBP3-213ENST00000529371 LMOD2Q6P5Q4 547 aa34.52■■■■□ 3.12
LTBP3-213ENST00000529371 TRPM3Q9HCF6 1732 aaPredicted RBP34.52■■■■□ 3.12
LTBP3-213ENST00000529371 SHPRHQ149N8 1683 aa34.51■■■■□ 3.12
LTBP3-213ENST00000529371 CPSF1Q10570 1443 aaKnown RBP34.51■■■■□ 3.12
LTBP3-213ENST00000529371 ARHGEF10O15013 1369 aa34.49■■■■□ 3.11
LTBP3-213ENST00000529371 PNPLA6Q8IY17 1366 aa34.49■■■■□ 3.11
LTBP3-213ENST00000529371 MYOM1P52179 1685 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms