RNA–Protein interactions for RNA: ENST00000529229.1

AP003390.2-201, humanhuman

TSL 4 BASIC

Gene AP003390.2, Length 559 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003390.2-201ENST00000529229 QRICH2Q9H0J4 1663 aa16.23■□□□□ 0.19
AP003390.2-201ENST00000529229 NEUROD1Q13562 356 aa16.22■□□□□ 0.19
AP003390.2-201ENST00000529229 WAPLQ7Z5K2 1190 aa16.22■□□□□ 0.19
AP003390.2-201ENST00000529229 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
AP003390.2-201ENST00000529229 RALGAPBQ86X10 1494 aa16.21■□□□□ 0.19
AP003390.2-201ENST00000529229 HSPA1LP34931 641 aa16.2■□□□□ 0.18
AP003390.2-201ENST00000529229 NBPF1Q3BBV0 1214 aa16.2■□□□□ 0.18
AP003390.2-201ENST00000529229 NBPF8Q3BBV2 869 aa16.2■□□□□ 0.18
AP003390.2-201ENST00000529229 TOPAZ1Q8N9V7 1692 aa16.2■□□□□ 0.18
AP003390.2-201ENST00000529229 GPRASP1Q5JY77 1395 aa16.19■□□□□ 0.18
AP003390.2-201ENST00000529229 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
AP003390.2-201ENST00000529229 CADPS2Q86UW7 1296 aa16.18■□□□□ 0.18
AP003390.2-201ENST00000529229 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
AP003390.2-201ENST00000529229 SHPRHQ149N8 1683 aa16.18■□□□□ 0.18
AP003390.2-201ENST00000529229 C14orf37Q86TY3 774 aa16.17■□□□□ 0.18
AP003390.2-201ENST00000529229 KIF1AQ12756 1690 aa16.17■□□□□ 0.18
AP003390.2-201ENST00000529229 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
AP003390.2-201ENST00000529229 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
AP003390.2-201ENST00000529229 TONSLQ96HA7 1378 aa16.15■□□□□ 0.18
AP003390.2-201ENST00000529229 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
AP003390.2-201ENST00000529229 BRINP3Q76B58 766 aa16.15■□□□□ 0.18
AP003390.2-201ENST00000529229 TRAK1Q9UPV9 953 aa16.15■□□□□ 0.18
AP003390.2-201ENST00000529229 CLSPNQ9HAW4 1339 aa16.15■□□□□ 0.18
AP003390.2-201ENST00000529229 TULP4Q9NRJ4 1543 aa16.14■□□□□ 0.18
AP003390.2-201ENST00000529229 ITSN1Q15811 1721 aa16.14■□□□□ 0.17
AP003390.2-201ENST00000529229 ATF3P18847 181 aa16.14■□□□□ 0.17
AP003390.2-201ENST00000529229 ATP7BP35670 1465 aa16.13■□□□□ 0.17
AP003390.2-201ENST00000529229 PXDNQ92626 1479 aa16.12■□□□□ 0.17
AP003390.2-201ENST00000529229 TRPM3Q9HCF6 1732 aaPredicted RBP16.11■□□□□ 0.17
AP003390.2-201ENST00000529229 SAFB2Q14151 953 aaKnown RBP eCLIP16.1■□□□□ 0.17
AP003390.2-201ENST00000529229 ROCK2O75116 1388 aaKnown RBP16.1■□□□□ 0.17
AP003390.2-201ENST00000529229 COL22A1Q8NFW1 1626 aaPredicted RBP16.09■□□□□ 0.17
AP003390.2-201ENST00000529229 ORAI2Q96SN7 254 aa16.09■□□□□ 0.17
AP003390.2-201ENST00000529229 PRR36Q9H6K5 1346 aa16.09■□□□□ 0.17
AP003390.2-201ENST00000529229 ANKARQ7Z5J8 1434 aa16.09■□□□□ 0.17
AP003390.2-201ENST00000529229 ABCA3Q99758 1704 aa16.08■□□□□ 0.17
AP003390.2-201ENST00000529229 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
AP003390.2-201ENST00000529229 MINK1Q8N4C8 1332 aaPredicted RBP16.07■□□□□ 0.16
AP003390.2-201ENST00000529229 LRP6O75581 1613 aa16.07■□□□□ 0.16
AP003390.2-201ENST00000529229 CRYBG1Q9Y4K1 1723 aa16.07■□□□□ 0.16
AP003390.2-201ENST00000529229 ALS2Q96Q42 1657 aa16.06■□□□□ 0.16
AP003390.2-201ENST00000529229 HIRIP3Q9BW71 556 aaPredicted RBP16.06■□□□□ 0.16
AP003390.2-201ENST00000529229 NUTM2FA1L443 756 aa16.04■□□□□ 0.16
AP003390.2-201ENST00000529229 POGKQ9P215 609 aa16.04■□□□□ 0.16
AP003390.2-201ENST00000529229 SOS2Q07890 1332 aaPredicted RBP16.03■□□□□ 0.16
AP003390.2-201ENST00000529229 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
AP003390.2-201ENST00000529229 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.16
AP003390.2-201ENST00000529229 AKAP12Q02952 1782 aa16.02■□□□□ 0.15
AP003390.2-201ENST00000529229 MARF1Q9Y4F3 1742 aaKnown RBP16.02■□□□□ 0.15
AP003390.2-201ENST00000529229 SBNO2Q9Y2G9 1366 aa16.01■□□□□ 0.15
AP003390.2-201ENST00000529229 CCER1Q8TC90 406 aaPredicted RBP16.01■□□□□ 0.15
AP003390.2-201ENST00000529229 PNPLA6Q8IY17 1366 aa16■□□□□ 0.15
AP003390.2-201ENST00000529229 JCADQ9P266 1359 aa16■□□□□ 0.15
AP003390.2-201ENST00000529229 NRKQ7Z2Y5 1582 aa16■□□□□ 0.15
AP003390.2-201ENST00000529229 ESCO1Q5FWF5 840 aa15.99■□□□□ 0.15
AP003390.2-201ENST00000529229 EIF3AQ14152 1382 aaKnown RBP15.99■□□□□ 0.15
AP003390.2-201ENST00000529229 MON2Q7Z3U7 1717 aa15.98■□□□□ 0.15
AP003390.2-201ENST00000529229 TIMELESSQ9UNS1 1208 aa15.98■□□□□ 0.15
AP003390.2-201ENST00000529229 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
AP003390.2-201ENST00000529229 MYOM1P52179 1685 aa15.96■□□□□ 0.15
AP003390.2-201ENST00000529229 NPHP3Q7Z494 1330 aa15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 PHRF1Q9P1Y6 1649 aaKnown RBP15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 FOXO3O43524 673 aa15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 XPCQ01831 940 aaPredicted RBP15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 CDK19Q9BWU1 502 aa15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 PHF8Q9UPP1 1060 aa15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
AP003390.2-201ENST00000529229 TNS3Q68CZ2 1445 aa15.94■□□□□ 0.14
AP003390.2-201ENST00000529229 USP47Q96K76 1375 aa15.94■□□□□ 0.14
AP003390.2-201ENST00000529229 NUDT16Q96DE0 195 aaKnown RBP15.93■□□□□ 0.14
AP003390.2-201ENST00000529229 TESK2Q96S53 571 aa15.93■□□□□ 0.14
AP003390.2-201ENST00000529229 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
AP003390.2-201ENST00000529229 PIK3C2AO00443 1686 aa15.92■□□□□ 0.14
AP003390.2-201ENST00000529229 CD163L1Q9NR16 1453 aa15.92■□□□□ 0.14
AP003390.2-201ENST00000529229 PMFBP1Q8TBY8 1022 aa15.92■□□□□ 0.14
AP003390.2-201ENST00000529229 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
AP003390.2-201ENST00000529229 SPATA31A6Q5VVP1 1343 aa15.91■□□□□ 0.14
AP003390.2-201ENST00000529229 SPATA31A3Q5VYP0 1347 aa15.91■□□□□ 0.14
AP003390.2-201ENST00000529229 SBNO1A3KN83 1393 aa15.9■□□□□ 0.14
AP003390.2-201ENST00000529229 USP54Q70EL1 1684 aa15.9■□□□□ 0.14
AP003390.2-201ENST00000529229 PLCH1Q4KWH8 1693 aa15.89■□□□□ 0.13
AP003390.2-201ENST00000529229 DISP3Q9P2K9 1392 aa15.89■□□□□ 0.13
AP003390.2-201ENST00000529229 SSH2Q76I76 1423 aa15.89■□□□□ 0.13
AP003390.2-201ENST00000529229 LRRC59Q96AG4 307 aaKnown RBP15.89■□□□□ 0.13
AP003390.2-201ENST00000529229 RGS17Q9UGC6 210 aaPredicted RBP15.89■□□□□ 0.13
AP003390.2-201ENST00000529229 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
AP003390.2-201ENST00000529229 PLEKHG3A1L390 1219 aa15.88■□□□□ 0.13
AP003390.2-201ENST00000529229 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
AP003390.2-201ENST00000529229 CCDC61Q9Y6R9 512 aa15.87■□□□□ 0.13
AP003390.2-201ENST00000529229 NRAPQ86VF7 1730 aa15.87■□□□□ 0.13
AP003390.2-201ENST00000529229 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
AP003390.2-201ENST00000529229 EVC2Q86UK5 1308 aa15.87■□□□□ 0.13
AP003390.2-201ENST00000529229 USP6P35125 1406 aa15.86■□□□□ 0.13
AP003390.2-201ENST00000529229 CPSF1Q10570 1443 aaKnown RBP15.86■□□□□ 0.13
AP003390.2-201ENST00000529229 SRPK2P78362 688 aaKnown RBP15.86■□□□□ 0.13
AP003390.2-201ENST00000529229 ACEP12821 1306 aa15.86■□□□□ 0.13
AP003390.2-201ENST00000529229 ATAD2Q6PL18 1390 aa15.84■□□□□ 0.13
AP003390.2-201ENST00000529229 NWD2Q9ULI1 1742 aa15.83■□□□□ 0.13
AP003390.2-201ENST00000529229 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
AP003390.2-201ENST00000529229 SLIT3O75094 1523 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms