RNA–Protein interactions for RNA: ENST00000528999.5

PUF60-213, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-213ENST00000528999 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
PUF60-213ENST00000528999 CFAP53Q96M91 514 aa14.08□□□□□ -0.16
PUF60-213ENST00000528999 SPATA31D1Q6ZQQ2 1576 aa14.08□□□□□ -0.16
PUF60-213ENST00000528999 ARHGEF28Q8N1W1 1705 aaKnown RBP14.07□□□□□ -0.16
PUF60-213ENST00000528999 DUSP27Q5VZP5 1158 aa14.07□□□□□ -0.16
PUF60-213ENST00000528999 SIRT1Q96EB6 747 aa14.07□□□□□ -0.16
PUF60-213ENST00000528999 SALL2Q9Y467 1007 aaPredicted RBP14.07□□□□□ -0.16
PUF60-213ENST00000528999 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
PUF60-213ENST00000528999 E9PSI1 815 aa14.06□□□□□ -0.16
PUF60-213ENST00000528999 TERF2IPQ9NYB0 399 aa14.06□□□□□ -0.16
PUF60-213ENST00000528999 STAG3Q9UJ98 1225 aa14.06□□□□□ -0.16
PUF60-213ENST00000528999 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
PUF60-213ENST00000528999 FBXO31Q5XUX0 539 aaPredicted RBP14.05□□□□□ -0.16
PUF60-213ENST00000528999 PLEKHH1Q9ULM0 1364 aa14.05□□□□□ -0.16
PUF60-213ENST00000528999 MED14O60244 1454 aa14.05□□□□□ -0.16
PUF60-213ENST00000528999 TULP4Q9NRJ4 1543 aa14.05□□□□□ -0.16
PUF60-213ENST00000528999 A2ML1A8K2U0 1454 aa14.04□□□□□ -0.16
PUF60-213ENST00000528999 PTPRMP28827 1452 aa14.04□□□□□ -0.16
PUF60-213ENST00000528999 ALKQ9UM73 1620 aa14.04□□□□□ -0.16
PUF60-213ENST00000528999 CCDC27Q2M243 656 aa14.03□□□□□ -0.16
PUF60-213ENST00000528999 RUNDC1Q96C34 613 aa14.03□□□□□ -0.16
PUF60-213ENST00000528999 POGKQ9P215 609 aa14.03□□□□□ -0.16
PUF60-213ENST00000528999 ABCC11Q96J66 1382 aa14.03□□□□□ -0.16
PUF60-213ENST00000528999 ARHGEF40Q8TER5 1519 aa14.02□□□□□ -0.16
PUF60-213ENST00000528999 APAF1O14727 1248 aa14.02□□□□□ -0.17
PUF60-213ENST00000528999 WDR63Q8IWG1 891 aa14.02□□□□□ -0.17
PUF60-213ENST00000528999 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.17
PUF60-213ENST00000528999 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
PUF60-213ENST00000528999 CLTCQ00610 1675 aaKnown RBP14.01□□□□□ -0.17
PUF60-213ENST00000528999 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
PUF60-213ENST00000528999 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
PUF60-213ENST00000528999 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
PUF60-213ENST00000528999 RIMS2Q9UQ26 1411 aa14□□□□□ -0.17
PUF60-213ENST00000528999 MS4A1P11836 297 aa14□□□□□ -0.17
PUF60-213ENST00000528999 SRPK2P78362 688 aaKnown RBP14□□□□□ -0.17
PUF60-213ENST00000528999 HDGFL2Q7Z4V5 671 aaPredicted RBP14□□□□□ -0.17
PUF60-213ENST00000528999 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
PUF60-213ENST00000528999 CABP2Q9NPB3 220 aa14□□□□□ -0.17
PUF60-213ENST00000528999 NKTRP30414 1462 aaKnown RBP13.99□□□□□ -0.17
PUF60-213ENST00000528999 ZMYM3Q14202 1370 aa13.99□□□□□ -0.17
PUF60-213ENST00000528999 MTHFSP49914 203 aa13.99□□□□□ -0.17
PUF60-213ENST00000528999 PNNQ9H307 717 aaKnown RBP13.99□□□□□ -0.17
PUF60-213ENST00000528999 STK26Q9P289 416 aa13.99□□□□□ -0.17
PUF60-213ENST00000528999 SENP3-EIF4A1A0A087X0R7 540 aa13.98□□□□□ -0.17
PUF60-213ENST00000528999 TSPOAP1O95153 1857 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 MYO5BQ9ULV0 1848 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 AAMPQ13685 434 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 CDK19Q9BWU1 502 aa13.97□□□□□ -0.17
PUF60-213ENST00000528999 FAM135BQ49AJ0 1406 aa13.96□□□□□ -0.18
PUF60-213ENST00000528999 A0A1W2PP64 1363 aa13.96□□□□□ -0.18
PUF60-213ENST00000528999 PDE3AQ14432 1141 aa13.95□□□□□ -0.18
PUF60-213ENST00000528999 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
PUF60-213ENST00000528999 ATP7BP35670 1465 aa13.94□□□□□ -0.18
PUF60-213ENST00000528999 FYB1O15117 783 aa13.94□□□□□ -0.18
PUF60-213ENST00000528999 CT47B1P0C2W7 299 aaPredicted RBP13.94□□□□□ -0.18
PUF60-213ENST00000528999 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
PUF60-213ENST00000528999 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
PUF60-213ENST00000528999 TECPR2O15040 1411 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 TCP11L2Q8N4U5 519 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 SHPRHQ149N8 1683 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 TNRQ92752 1358 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 CD163L1Q9NR16 1453 aa13.93□□□□□ -0.18
PUF60-213ENST00000528999 CENPQQ7L2Z9 268 aaPredicted RBP13.92□□□□□ -0.18
PUF60-213ENST00000528999 PNPLA6Q8IY17 1366 aa13.92□□□□□ -0.18
PUF60-213ENST00000528999 IQSEC2Q5JU85 1478 aa13.92□□□□□ -0.18
PUF60-213ENST00000528999 PLIN1O60240 522 aa13.91□□□□□ -0.18
PUF60-213ENST00000528999 SAFB2Q14151 953 aaKnown RBP eCLIP13.91□□□□□ -0.18
PUF60-213ENST00000528999 MYH16Q9H6N6 1097 aa13.91□□□□□ -0.18
PUF60-213ENST00000528999 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
PUF60-213ENST00000528999 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
PUF60-213ENST00000528999 CABP1Q9NZU7 370 aa13.9□□□□□ -0.18
PUF60-213ENST00000528999 NLRP1Q9C000 1473 aa13.9□□□□□ -0.18
PUF60-213ENST00000528999 SETD1AO15047 1707 aaKnown RBP13.9□□□□□ -0.18
PUF60-213ENST00000528999 IL16Q14005 1332 aa13.9□□□□□ -0.19
PUF60-213ENST00000528999 TMEM2Q9UHN6 1383 aa13.89□□□□□ -0.19
PUF60-213ENST00000528999 U2AF1L5P0DN76 240 aaPredicted RBP13.89□□□□□ -0.19
PUF60-213ENST00000528999 U2AF1Q01081 240 aaKnown RBP eCLIP13.89□□□□□ -0.19
PUF60-213ENST00000528999 MLECQ14165 292 aa13.89□□□□□ -0.19
PUF60-213ENST00000528999 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
PUF60-213ENST00000528999 SPINK5Q9NQ38 1064 aaPredicted RBP13.89□□□□□ -0.19
PUF60-213ENST00000528999 ANKRD26Q9UPS8 1709 aa13.89□□□□□ -0.19
PUF60-213ENST00000528999 KDM2BQ8NHM5 1336 aa13.88□□□□□ -0.19
PUF60-213ENST00000528999 DIAPH1O60610 1272 aaKnown RBP13.87□□□□□ -0.19
PUF60-213ENST00000528999 FCHSD2O94868 740 aa13.87□□□□□ -0.19
PUF60-213ENST00000528999 PLEKHF1Q96S99 279 aa13.87□□□□□ -0.19
PUF60-213ENST00000528999 GGNBP2Q9H3C7 697 aa13.87□□□□□ -0.19
PUF60-213ENST00000528999 CCDC61Q9Y6R9 512 aa13.87□□□□□ -0.19
PUF60-213ENST00000528999 CPSF1Q10570 1443 aaKnown RBP13.87□□□□□ -0.19
PUF60-213ENST00000528999 KNDC1Q76NI1 1749 aa13.87□□□□□ -0.19
PUF60-213ENST00000528999 EDC4Q6P2E9 1401 aaKnown RBP13.86□□□□□ -0.19
PUF60-213ENST00000528999 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
PUF60-213ENST00000528999 COL3A1P02461 1466 aaPredicted RBP13.86□□□□□ -0.19
PUF60-213ENST00000528999 PLEKHG1Q9ULL1 1385 aa13.85□□□□□ -0.19
PUF60-213ENST00000528999 C20orf194Q5TEA3 1177 aa13.85□□□□□ -0.19
PUF60-213ENST00000528999 WAPLQ7Z5K2 1190 aa13.85□□□□□ -0.19
PUF60-213ENST00000528999 NRXN3Q9Y4C0 1643 aa13.85□□□□□ -0.19
PUF60-213ENST00000528999 METP08581 1390 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms