RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 BRINP3Q76B58 766 aa13.5□□□□□ -0.25
SSBP3-212ENST00000528930 SLC26A8Q96RN1 970 aa13.5□□□□□ -0.25
SSBP3-212ENST00000528930 LAMC1P11047 1609 aa13.5□□□□□ -0.25
SSBP3-212ENST00000528930 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
SSBP3-212ENST00000528930 CADPS2Q86UW7 1296 aa13.48□□□□□ -0.25
SSBP3-212ENST00000528930 CFDP1Q9UEE9 299 aaPredicted RBP13.48□□□□□ -0.25
SSBP3-212ENST00000528930 USP21Q9UK80 565 aa13.47□□□□□ -0.25
SSBP3-212ENST00000528930 COL22A1Q8NFW1 1626 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-212ENST00000528930 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-212ENST00000528930 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
SSBP3-212ENST00000528930 ARHGAP31Q2M1Z3 1444 aa13.46□□□□□ -0.26
SSBP3-212ENST00000528930 GLI3P10071 1580 aa13.45□□□□□ -0.26
SSBP3-212ENST00000528930 ATMINO43313 823 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-212ENST00000528930 PROM2Q8N271 834 aa13.45□□□□□ -0.26
SSBP3-212ENST00000528930 DCCP43146 1447 aa13.45□□□□□ -0.26
SSBP3-212ENST00000528930 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
SSBP3-212ENST00000528930 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
SSBP3-212ENST00000528930 ASTLQ6HA08 431 aaPredicted RBP13.44□□□□□ -0.26
SSBP3-212ENST00000528930 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
SSBP3-212ENST00000528930 METRNQ9UJH8 293 aa13.44□□□□□ -0.26
SSBP3-212ENST00000528930 CHD4Q14839 1912 aa13.44□□□□□ -0.26
SSBP3-212ENST00000528930 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
SSBP3-212ENST00000528930 CAMTA1Q9Y6Y1 1673 aa13.44□□□□□ -0.26
SSBP3-212ENST00000528930 C19orf44Q9H6X5 657 aa13.42□□□□□ -0.26
SSBP3-212ENST00000528930 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
SSBP3-212ENST00000528930 RGPD1P0DJD0 1748 aa13.42□□□□□ -0.26
SSBP3-212ENST00000528930 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
SSBP3-212ENST00000528930 MST1RQ04912 1400 aa13.41□□□□□ -0.26
SSBP3-212ENST00000528930 VPS8Q8N3P4 1428 aa13.41□□□□□ -0.26
SSBP3-212ENST00000528930 ADAMTS2O95450 1211 aa13.41□□□□□ -0.26
SSBP3-212ENST00000528930 ATF3P18847 181 aa13.41□□□□□ -0.26
SSBP3-212ENST00000528930 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
SSBP3-212ENST00000528930 POTEJP0CG39 1038 aa13.4□□□□□ -0.26
SSBP3-212ENST00000528930 ZNF784Q8NCA9 323 aaPredicted RBP13.4□□□□□ -0.26
SSBP3-212ENST00000528930 CCDC61Q9Y6R9 512 aa13.4□□□□□ -0.26
SSBP3-212ENST00000528930 MTUS2Q5JR59 1369 aa13.4□□□□□ -0.26
SSBP3-212ENST00000528930 ARHGEF5Q12774 1597 aa13.39□□□□□ -0.27
SSBP3-212ENST00000528930 SF3B2Q13435 895 aaKnown RBP13.38□□□□□ -0.27
SSBP3-212ENST00000528930 EHBP1L1Q8N3D4 1523 aa13.38□□□□□ -0.27
SSBP3-212ENST00000528930 PLEKHG1Q9ULL1 1385 aa13.37□□□□□ -0.27
SSBP3-212ENST00000528930 TNS1Q9HBL0 1735 aaKnown RBP13.37□□□□□ -0.27
SSBP3-212ENST00000528930 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
SSBP3-212ENST00000528930 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
SSBP3-212ENST00000528930 ATN1P54259 1190 aaPredicted RBP13.36□□□□□ -0.27
SSBP3-212ENST00000528930 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
SSBP3-212ENST00000528930 C7P10643 843 aa13.35□□□□□ -0.27
SSBP3-212ENST00000528930 MIER1Q8N108 512 aa13.35□□□□□ -0.27
SSBP3-212ENST00000528930 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
SSBP3-212ENST00000528930 TRPC6Q9Y210 931 aa13.35□□□□□ -0.27
SSBP3-212ENST00000528930 XRN1Q8IZH2 1706 aaKnown RBP13.35□□□□□ -0.27
SSBP3-212ENST00000528930 RALGAPBQ86X10 1494 aa13.35□□□□□ -0.27
SSBP3-212ENST00000528930 TRPM2O94759 1503 aa13.34□□□□□ -0.27
SSBP3-212ENST00000528930 POTEMA6NI47 508 aa13.34□□□□□ -0.27
SSBP3-212ENST00000528930 KIF12Q96FN5 646 aa13.34□□□□□ -0.27
SSBP3-212ENST00000528930 MYOM2P54296 1465 aa13.34□□□□□ -0.27
SSBP3-212ENST00000528930 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
SSBP3-212ENST00000528930 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
SSBP3-212ENST00000528930 PIK3R4Q99570 1358 aa13.32□□□□□ -0.28
SSBP3-212ENST00000528930 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
SSBP3-212ENST00000528930 NALCNQ8IZF0 1738 aa13.32□□□□□ -0.28
SSBP3-212ENST00000528930 DISP2A7MBM2 1401 aa13.31□□□□□ -0.28
SSBP3-212ENST00000528930 BAG6P46379 1132 aa13.31□□□□□ -0.28
SSBP3-212ENST00000528930 KANK4Q5T7N3 995 aaPredicted RBP13.31□□□□□ -0.28
SSBP3-212ENST00000528930 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
SSBP3-212ENST00000528930 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
SSBP3-212ENST00000528930 RREB1Q92766 1687 aa13.31□□□□□ -0.28
SSBP3-212ENST00000528930 CEP350Q5VT06 3117 aa13.3□□□□□ -0.28
SSBP3-212ENST00000528930 ADAMTS13Q76LX8 1427 aa13.3□□□□□ -0.28
SSBP3-212ENST00000528930 IDI1Q13907 227 aa13.3□□□□□ -0.28
SSBP3-212ENST00000528930 DDX17Q92841 729 aaKnown RBP13.3□□□□□ -0.28
SSBP3-212ENST00000528930 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
SSBP3-212ENST00000528930 MAP3K13O43283 966 aa13.29□□□□□ -0.28
SSBP3-212ENST00000528930 POTEGQ6S5H5 508 aa13.29□□□□□ -0.28
SSBP3-212ENST00000528930 RSPH4AQ5TD94 716 aa13.28□□□□□ -0.28
SSBP3-212ENST00000528930 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
SSBP3-212ENST00000528930 SLIT2O94813 1529 aa13.28□□□□□ -0.28
SSBP3-212ENST00000528930 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.28
SSBP3-212ENST00000528930 NOS1P29475 1434 aa13.27□□□□□ -0.29
SSBP3-212ENST00000528930 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.29
SSBP3-212ENST00000528930 SOS2Q07890 1332 aaPredicted RBP13.26□□□□□ -0.29
SSBP3-212ENST00000528930 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
SSBP3-212ENST00000528930 NWD2Q9ULI1 1742 aa13.25□□□□□ -0.29
SSBP3-212ENST00000528930 PTPRUQ92729 1446 aa13.25□□□□□ -0.29
SSBP3-212ENST00000528930 BCANQ96GW7 911 aa13.25□□□□□ -0.29
SSBP3-212ENST00000528930 DUOX2Q9NRD8 1548 aa13.24□□□□□ -0.29
SSBP3-212ENST00000528930 POTEFA5A3E0 1075 aa13.24□□□□□ -0.29
SSBP3-212ENST00000528930 PPP1R15AO75807 674 aaPredicted RBP13.24□□□□□ -0.29
SSBP3-212ENST00000528930 PLEKHG5O94827 1062 aa13.24□□□□□ -0.29
SSBP3-212ENST00000528930 RIMS2Q9UQ26 1411 aa13.23□□□□□ -0.29
SSBP3-212ENST00000528930 PLCH1Q4KWH8 1693 aa13.23□□□□□ -0.29
SSBP3-212ENST00000528930 ADGRB2O60241 1585 aa13.23□□□□□ -0.29
SSBP3-212ENST00000528930 RPRD2Q5VT52 1461 aaKnown RBP13.23□□□□□ -0.29
SSBP3-212ENST00000528930 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
SSBP3-212ENST00000528930 SLC34A2O95436 690 aa13.22□□□□□ -0.29
SSBP3-212ENST00000528930 EN1Q05925 392 aaPredicted RBP13.22□□□□□ -0.29
SSBP3-212ENST00000528930 SEPT12Q8IYM1 358 aa13.22□□□□□ -0.29
SSBP3-212ENST00000528930 USP32Q8NFA0 1604 aa13.21□□□□□ -0.3
SSBP3-212ENST00000528930 NRXN3Q9Y4C0 1643 aa13.21□□□□□ -0.3
SSBP3-212ENST00000528930 ONECUT3O60422 494 aaPredicted RBP13.2□□□□□ -0.3
SSBP3-212ENST00000528930 KRT27Q7Z3Y8 459 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms