RNA–Protein interactions for RNA: ENST00000528611.1

MACF1-228, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 380 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-228ENST00000528611 HSPA2P54652 639 aa8.78□□□□□ -1
MACF1-228ENST00000528611 BCANQ96GW7 911 aa8.78□□□□□ -1
MACF1-228ENST00000528611 CARD11Q9BXL7 1154 aa8.78□□□□□ -1
MACF1-228ENST00000528611 YTHDC2Q9H6S0 1430 aaKnown RBP8.78□□□□□ -1
MACF1-228ENST00000528611 NCKAP5LQ9HCH0 1330 aa8.78□□□□□ -1
MACF1-228ENST00000528611 NWD1Q149M9 1564 aa8.78□□□□□ -1
MACF1-228ENST00000528611 CHD2O14647 1828 aaKnown RBP8.77□□□□□ -1
MACF1-228ENST00000528611 EIF4G2P78344 907 aaKnown RBP eCLIP8.77□□□□□ -1.01
MACF1-228ENST00000528611 METP08581 1390 aa8.76□□□□□ -1.01
MACF1-228ENST00000528611 CPS1P31327 1500 aa8.76□□□□□ -1.01
MACF1-228ENST00000528611 FXR2P51116 673 aaKnown RBP eCLIP8.76□□□□□ -1.01
MACF1-228ENST00000528611 XRN1Q8IZH2 1706 aaKnown RBP8.75□□□□□ -1.01
MACF1-228ENST00000528611 HAX1O00165 279 aa8.75□□□□□ -1.01
MACF1-228ENST00000528611 NBPF1Q3BBV0 1214 aa8.75□□□□□ -1.01
MACF1-228ENST00000528611 CDCA8Q53HL2 280 aa8.75□□□□□ -1.01
MACF1-228ENST00000528611 NUTM2DQ5VT03 806 aaPredicted RBP8.75□□□□□ -1.01
MACF1-228ENST00000528611 SLC26A8Q96RN1 970 aa8.75□□□□□ -1.01
MACF1-228ENST00000528611 AMOTL2Q9Y2J4 779 aa8.75□□□□□ -1.01
MACF1-228ENST00000528611 IQSEC2Q5JU85 1478 aa8.74□□□□□ -1.01
MACF1-228ENST00000528611 ASXL1Q8IXJ9 1541 aa8.74□□□□□ -1.01
MACF1-228ENST00000528611 USP47Q96K76 1375 aa8.73□□□□□ -1.01
MACF1-228ENST00000528611 DCCP43146 1447 aa8.73□□□□□ -1.01
MACF1-228ENST00000528611 ATF5Q9Y2D1 282 aaPredicted RBP8.73□□□□□ -1.01
MACF1-228ENST00000528611 CENPJQ9HC77 1338 aaPredicted RBP8.73□□□□□ -1.01
MACF1-228ENST00000528611 PTPRUQ92729 1446 aa8.72□□□□□ -1.01
MACF1-228ENST00000528611 TMEM132EQ6IEE7 984 aa8.72□□□□□ -1.01
MACF1-228ENST00000528611 PITPNM1O00562 1244 aa8.71□□□□□ -1.02
MACF1-228ENST00000528611 POGKQ9P215 609 aa8.71□□□□□ -1.02
MACF1-228ENST00000528611 ARHGEF28Q8N1W1 1705 aaKnown RBP8.71□□□□□ -1.02
MACF1-228ENST00000528611 ADGRB2O60241 1585 aa8.7□□□□□ -1.02
MACF1-228ENST00000528611 TMF1P82094 1093 aa8.7□□□□□ -1.02
MACF1-228ENST00000528611 C19orf44Q9H6X5 657 aa8.7□□□□□ -1.02
MACF1-228ENST00000528611 TRAK1Q9UPV9 953 aa8.7□□□□□ -1.02
MACF1-228ENST00000528611 NINLQ9Y2I6 1382 aa8.7□□□□□ -1.02
MACF1-228ENST00000528611 ST20-MTHFSA0A0A6YYL1 179 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 PROSER2Q86WR7 435 aaPredicted RBP8.69□□□□□ -1.02
MACF1-228ENST00000528611 PRAM1Q96QH2 718 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 TESK2Q96S53 571 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 EVC2Q86UK5 1308 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 ROBO2Q9HCK4 1378 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 ADGRL3Q9HAR2 1447 aa8.69□□□□□ -1.02
MACF1-228ENST00000528611 CADPS2Q86UW7 1296 aa8.68□□□□□ -1.02
MACF1-228ENST00000528611 STK26Q9P289 416 aa8.68□□□□□ -1.02
MACF1-228ENST00000528611 ANKARQ7Z5J8 1434 aa8.68□□□□□ -1.02
MACF1-228ENST00000528611 LTBP4Q8N2S1 1624 aa8.68□□□□□ -1.02
MACF1-228ENST00000528611 WASLO00401 505 aaPredicted RBP8.67□□□□□ -1.02
MACF1-228ENST00000528611 HSPA5P11021 654 aaKnown RBP8.67□□□□□ -1.02
MACF1-228ENST00000528611 MSH6P52701 1360 aa8.67□□□□□ -1.02
MACF1-228ENST00000528611 TMEM94Q12767 1356 aa8.67□□□□□ -1.02
MACF1-228ENST00000528611 CDC42BPGQ6DT37 1551 aa8.67□□□□□ -1.02
MACF1-228ENST00000528611 ATAD2Q6PL18 1390 aa8.67□□□□□ -1.02
MACF1-228ENST00000528611 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
MACF1-228ENST00000528611 BRD4O60885 1362 aaPredicted RBP8.66□□□□□ -1.02
MACF1-228ENST00000528611 ZNF335Q9H4Z2 1342 aaPredicted RBP8.66□□□□□ -1.02
MACF1-228ENST00000528611 QRICH2Q9H0J4 1663 aa8.65□□□□□ -1.02
MACF1-228ENST00000528611 WAPLQ7Z5K2 1190 aa8.65□□□□□ -1.02
MACF1-228ENST00000528611 CCDC61Q9Y6R9 512 aa8.65□□□□□ -1.02
MACF1-228ENST00000528611 STRCP1A6NGW2 1772 aa8.65□□□□□ -1.02
MACF1-228ENST00000528611 ATF3P18847 181 aa8.64□□□□□ -1.03
MACF1-228ENST00000528611 ZNF692Q9BU19 519 aaPredicted RBP8.64□□□□□ -1.03
MACF1-228ENST00000528611 TULP4Q9NRJ4 1543 aa8.64□□□□□ -1.03
MACF1-228ENST00000528611 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.63□□□□□ -1.03
MACF1-228ENST00000528611 ZNF316A6NFI3 1004 aaPredicted RBP8.63□□□□□ -1.03
MACF1-228ENST00000528611 EVX2Q03828 476 aa8.63□□□□□ -1.03
MACF1-228ENST00000528611 CDK19Q9BWU1 502 aa8.63□□□□□ -1.03
MACF1-228ENST00000528611 FOXD4L1Q9NU39 408 aa8.63□□□□□ -1.03
MACF1-228ENST00000528611 PLEKHH1Q9ULM0 1364 aa8.62□□□□□ -1.03
MACF1-228ENST00000528611 WASHC2AQ641Q2 1341 aa8.62□□□□□ -1.03
MACF1-228ENST00000528611 PLEKHG3A1L390 1219 aa8.62□□□□□ -1.03
MACF1-228ENST00000528611 TOM1O60784 492 aa8.62□□□□□ -1.03
MACF1-228ENST00000528611 C14orf37Q86TY3 774 aa8.62□□□□□ -1.03
MACF1-228ENST00000528611 NALCNQ8IZF0 1738 aa8.61□□□□□ -1.03
MACF1-228ENST00000528611 FMN2Q9NZ56 1722 aa8.61□□□□□ -1.03
MACF1-228ENST00000528611 SRPK2P78362 688 aaKnown RBP8.61□□□□□ -1.03
MACF1-228ENST00000528611 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
MACF1-228ENST00000528611 ATP7BP35670 1465 aa8.61□□□□□ -1.03
MACF1-228ENST00000528611 CCDC7Q96M83 1385 aa8.61□□□□□ -1.03
MACF1-228ENST00000528611 ITSN1Q15811 1721 aa8.6□□□□□ -1.03
MACF1-228ENST00000528611 MINK1Q8N4C8 1332 aaPredicted RBP8.6□□□□□ -1.03
MACF1-228ENST00000528611 XIRP1Q702N8 1843 aaKnown RBP8.6□□□□□ -1.03
MACF1-228ENST00000528611 NUDT16Q96DE0 195 aaKnown RBP8.6□□□□□ -1.03
MACF1-228ENST00000528611 TERF2IPQ9NYB0 399 aa8.6□□□□□ -1.03
MACF1-228ENST00000528611 SLAIN2Q9P270 581 aa8.6□□□□□ -1.03
MACF1-228ENST00000528611 POLR3AO14802 1390 aaPredicted RBP8.6□□□□□ -1.03
MACF1-228ENST00000528611 C1orf167Q5SNV9 1468 aa8.59□□□□□ -1.03
MACF1-228ENST00000528611 MST1RQ04912 1400 aa8.59□□□□□ -1.03
MACF1-228ENST00000528611 DISP3Q9P2K9 1392 aa8.59□□□□□ -1.03
MACF1-228ENST00000528611 KIF1AQ12756 1690 aa8.59□□□□□ -1.03
MACF1-228ENST00000528611 KIF7Q2M1P5 1343 aa8.58□□□□□ -1.04
MACF1-228ENST00000528611 SAFB2Q14151 953 aaKnown RBP eCLIP8.58□□□□□ -1.04
MACF1-228ENST00000528611 ANKRD36BQ8N2N9 1353 aa8.58□□□□□ -1.04
MACF1-228ENST00000528611 NPHP3Q7Z494 1330 aa8.57□□□□□ -1.04
MACF1-228ENST00000528611 CPSF1Q10570 1443 aaKnown RBP8.57□□□□□ -1.04
MACF1-228ENST00000528611 HDGFL2Q7Z4V5 671 aaPredicted RBP8.57□□□□□ -1.04
MACF1-228ENST00000528611 HIRIP3Q9BW71 556 aaPredicted RBP8.57□□□□□ -1.04
MACF1-228ENST00000528611 PHF8Q9UPP1 1060 aa8.57□□□□□ -1.04
MACF1-228ENST00000528611 NPC1L1Q9UHC9 1359 aa8.57□□□□□ -1.04
MACF1-228ENST00000528611 TOPAZ1Q8N9V7 1692 aa8.56□□□□□ -1.04
MACF1-228ENST00000528611 PPIP5K1Q6PFW1 1433 aa8.56□□□□□ -1.04
MACF1-228ENST00000528611 PSME1Q06323 249 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms