RNA–Protein interactions for RNA: ENST00000528225.5

ARHGEF12-206, Transcript of Rho guanine nucleotide exchange factor 12, humanhuman

TSL 5

Gene ARHGEF12, Length 2,647 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF12-206ENST00000528225 POLR3AO14802 1390 aaPredicted RBP10.46□□□□□ -0.73
ARHGEF12-206ENST00000528225 MVPQ14764 893 aaKnown RBP10.46□□□□□ -0.73
ARHGEF12-206ENST00000528225 SKOR2Q2VWA4 1001 aaPredicted RBP10.46□□□□□ -0.73
ARHGEF12-206ENST00000528225 WDR63Q8IWG1 891 aa10.46□□□□□ -0.73
ARHGEF12-206ENST00000528225 SCAPERQ9BY12 1400 aa10.46□□□□□ -0.73
ARHGEF12-206ENST00000528225 GAS2L3Q86XJ1 694 aa10.46□□□□□ -0.74
ARHGEF12-206ENST00000528225 GBP4Q96PP9 640 aa10.46□□□□□ -0.74
ARHGEF12-206ENST00000528225 PDCL3Q9H2J4 239 aa10.46□□□□□ -0.74
ARHGEF12-206ENST00000528225 MAST1Q9Y2H9 1570 aa10.46□□□□□ -0.74
ARHGEF12-206ENST00000528225 FBLN2P98095 1184 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 TCP11L2Q8N4U5 519 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 TNPO1Q92973 898 aaKnown RBP10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 CARD14Q9BXL6 1004 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 SLC24A1O60721 1099 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 PTMSP20962 102 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 PREX2Q70Z35 1606 aa10.45□□□□□ -0.74
ARHGEF12-206ENST00000528225 DDIT3P35638 169 aa10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 ZKSCAN2Q63HK3 967 aa10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 SNX21Q969T3 373 aa10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 FTSJ3Q8IY81 847 aaKnown RBP10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 SYCP2Q9BX26 1530 aa10.44□□□□□ -0.74
ARHGEF12-206ENST00000528225 NCOA3Q9Y6Q9 1424 aa10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 HSP90AB1P08238 724 aaKnown RBP10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 SMC5Q8IY18 1101 aa10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 DZIP1LQ8IYY4 767 aaKnown RBP10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 CEP152O94986 1710 aa10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 KIAA1211Q6ZU35 1233 aa10.43□□□□□ -0.74
ARHGEF12-206ENST00000528225 RBM25P49756 843 aaKnown RBP10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 CCDC173Q0VFZ6 552 aa10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 PHF23Q9BUL5 403 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 HDAC1Q13547 482 aaPredicted RBP10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 RAB3GAP1Q15042 981 aa10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 MORC1Q86VD1 984 aa10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 SPHKAPQ2M3C7 1700 aa10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 DUOX2Q9NRD8 1548 aa10.42□□□□□ -0.74
ARHGEF12-206ENST00000528225 ANP32BQ92688 251 aaKnown RBP10.41□□□□□ -0.74
ARHGEF12-206ENST00000528225 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
ARHGEF12-206ENST00000528225 CCDC27Q2M243 656 aa10.41□□□□□ -0.74
ARHGEF12-206ENST00000528225 PPP1R9BQ96SB3 815 aa10.41□□□□□ -0.74
ARHGEF12-206ENST00000528225 TNNT2P45379 298 aaPredicted RBP10.4□□□□□ -0.74
ARHGEF12-206ENST00000528225 ARHGAP5Q13017 1502 aa10.4□□□□□ -0.74
ARHGEF12-206ENST00000528225 ZSCAN30Q86W11 494 aa10.4□□□□□ -0.74
ARHGEF12-206ENST00000528225 KANK1Q14678 1352 aa10.4□□□□□ -0.74
ARHGEF12-206ENST00000528225 OFD1O75665 1012 aa10.4□□□□□ -0.74
ARHGEF12-206ENST00000528225 SHPRHQ149N8 1683 aa10.4□□□□□ -0.75
ARHGEF12-206ENST00000528225 ERVK-7P63135 1459 aa10.4□□□□□ -0.75
ARHGEF12-206ENST00000528225 MSNP26038 577 aaKnown RBP10.39□□□□□ -0.75
ARHGEF12-206ENST00000528225 NASPP49321 788 aaPredicted RBP10.39□□□□□ -0.75
ARHGEF12-206ENST00000528225 DDX19BQ9UMR2 479 aa10.39□□□□□ -0.75
ARHGEF12-206ENST00000528225 IQSEC2Q5JU85 1478 aa10.39□□□□□ -0.75
ARHGEF12-206ENST00000528225 GOLGA6L22H0YM25 854 aa10.38□□□□□ -0.75
ARHGEF12-206ENST00000528225 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.38□□□□□ -0.75
ARHGEF12-206ENST00000528225 ITPRIPQ8IWB1 547 aa10.38□□□□□ -0.75
ARHGEF12-206ENST00000528225 FOXD4L1Q9NU39 408 aa10.38□□□□□ -0.75
ARHGEF12-206ENST00000528225 SMC4Q9NTJ3 1288 aa10.38□□□□□ -0.75
ARHGEF12-206ENST00000528225 CT47B1P0C2W7 299 aaPredicted RBP10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 CFAP70Q5T0N1 1121 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 CFAP53Q96M91 514 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 KIAA1210Q9ULL0 1709 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 TERF1P54274 439 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 TRIM27P14373 513 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 MTHFSP49914 203 aa10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
ARHGEF12-206ENST00000528225 SHROOM2Q13796 1616 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 RBM10P98175 930 aaKnown RBP10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 DDX49Q9Y6V7 483 aaKnown RBP10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 TRPM2O94759 1503 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 K7ELQ4 463 aaPredicted RBP10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 SSFA2P28290 1259 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 NUCB1Q02818 461 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 EXOSC9Q06265 439 aaKnown RBP10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 ATF7IPQ6VMQ6 1270 aa10.36□□□□□ -0.75
ARHGEF12-206ENST00000528225 TSR2Q969E8 191 aaKnown RBP10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 MAP7D2Q96T17 732 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 LNPKQ9C0E8 428 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 CLTCL1P53675 1640 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 RIPK4P57078 832 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 KLHL40Q2TBA0 621 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 SSH1Q8WYL5 1049 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 KIF2CQ99661 725 aa10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 NOB1Q9ULX3 412 aaKnown RBP10.35□□□□□ -0.75
ARHGEF12-206ENST00000528225 IBTKQ9P2D0 1353 aaPredicted RBP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 U2AF1L5P0DN76 240 aaPredicted RBP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 U2AF1Q01081 240 aaKnown RBP eCLIP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 CHD1LQ86WJ1 897 aa10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 TMEM57Q8N5G2 664 aa10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 R3HCC1Q9Y3T6 440 aaKnown RBP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 CD2BP2O95400 341 aaKnown RBP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 BAG4O95429 457 aaKnown RBP10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 ZBTB40Q9NUA8 1239 aa10.34□□□□□ -0.75
ARHGEF12-206ENST00000528225 PTPRTO14522 1441 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 HS1BP3Q53T59 392 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 BMP2KLQ5H9B9 411 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 CLEC17AQ6ZS10 378 aa10.33□□□□□ -0.76
ARHGEF12-206ENST00000528225 SLC12A5Q9H2X9 1139 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms