RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 CRBNQ96SW2 442 aa18.92■□□□□ 0.62
USP47-207ENST00000527733 CHMP3Q9Y3E7 222 aa18.92■□□□□ 0.62
USP47-207ENST00000527733 NEO1Q92859 1461 aa18.92■□□□□ 0.62
USP47-207ENST00000527733 CHD1O14646 1710 aa18.91■□□□□ 0.62
USP47-207ENST00000527733 SULT6B1Q6IMI4 303 aa18.91■□□□□ 0.62
USP47-207ENST00000527733 PZPP20742 1482 aa18.91■□□□□ 0.62
USP47-207ENST00000527733 CCDC184Q52MB2 194 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 DZIP1LQ8IYY4 767 aaKnown RBP18.9■□□□□ 0.62
USP47-207ENST00000527733 GOLGA6L22H0YM25 854 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 KIF16BQ96L93 1317 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 PRAG1Q86YV5 1406 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.9■□□□□ 0.627e-7■■□□□ 14.3
USP47-207ENST00000527733 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 MCCP23508 829 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
USP47-207ENST00000527733 FGD1P98174 961 aa18.89■□□□□ 0.61
USP47-207ENST00000527733 TAF7LQ5H9L4 462 aa18.89■□□□□ 0.61
USP47-207ENST00000527733 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
USP47-207ENST00000527733 PLEKHO1Q53GL0 409 aaPredicted RBP18.89■□□□□ 0.61
USP47-207ENST00000527733 ATP10AO60312 1499 aa18.88■□□□□ 0.61
USP47-207ENST00000527733 SMG6Q86US8 1419 aaKnown RBP18.88■□□□□ 0.61
USP47-207ENST00000527733 RRS1Q15050 365 aaKnown RBP18.88■□□□□ 0.61
USP47-207ENST00000527733 CENPQQ7L2Z9 268 aaPredicted RBP18.88■□□□□ 0.61
USP47-207ENST00000527733 NEXNQ0ZGT2 675 aa18.88■□□□□ 0.61
USP47-207ENST00000527733 ZMYM3Q14202 1370 aa18.87■□□□□ 0.61
USP47-207ENST00000527733 NECTIN2Q92692 538 aa18.87■□□□□ 0.61
USP47-207ENST00000527733 RIMS2Q9UQ26 1411 aa18.86■□□□□ 0.61
USP47-207ENST00000527733 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
USP47-207ENST00000527733 MEX3CQ5U5Q3 659 aaKnown RBP18.86■□□□□ 0.61
USP47-207ENST00000527733 SYTL4Q96C24 671 aaPredicted RBP18.86■□□□□ 0.61
USP47-207ENST00000527733 PHF8Q9UPP1 1060 aa18.86■□□□□ 0.61
USP47-207ENST00000527733 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
USP47-207ENST00000527733 HSP90AB1P08238 724 aaKnown RBP18.86■□□□□ 0.61
USP47-207ENST00000527733 FKBP5Q13451 457 aaPredicted RBP18.86■□□□□ 0.61
USP47-207ENST00000527733 XPCQ01831 940 aaPredicted RBP18.85■□□□□ 0.61
USP47-207ENST00000527733 KIAA1211Q6ZU35 1233 aa18.85■□□□□ 0.61
USP47-207ENST00000527733 GPATCH3Q96I76 525 aa18.85■□□□□ 0.61
USP47-207ENST00000527733 DDX58O95786 925 aaKnown RBP18.85■□□□□ 0.61
USP47-207ENST00000527733 GORABQ5T7V8 394 aa18.84■□□□□ 0.61
USP47-207ENST00000527733 FCHSD2O94868 740 aa18.84■□□□□ 0.61
USP47-207ENST00000527733 KCNH5Q8NCM2 988 aa18.84■□□□□ 0.61
USP47-207ENST00000527733 MBD5Q9P267 1494 aa18.84■□□□□ 0.61
USP47-207ENST00000527733 GTF2E1P29083 439 aaPredicted RBP18.84■□□□□ 0.61
USP47-207ENST00000527733 HSCBQ8IWL3 235 aa18.83■□□□□ 0.6
USP47-207ENST00000527733 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.6
USP47-207ENST00000527733 TATP17735 454 aaPredicted RBP18.82■□□□□ 0.6
USP47-207ENST00000527733 NME9Q86XW9 330 aa18.82■□□□□ 0.6
USP47-207ENST00000527733 ARHGEF5Q12774 1597 aa18.82■□□□□ 0.6
USP47-207ENST00000527733 PRDM11Q9NQV5 511 aa18.82■□□□□ 0.6
USP47-207ENST00000527733 RBM33Q96EV2 1170 aaKnown RBP18.82■□□□□ 0.6
USP47-207ENST00000527733 USP35Q9P2H5 1018 aa18.82■□□□□ 0.6
USP47-207ENST00000527733 C9orf78Q9NZ63 289 aaPredicted RBP18.82■□□□□ 0.6
USP47-207ENST00000527733 RBM19Q9Y4C8 960 aaKnown RBP18.81■□□□□ 0.6
USP47-207ENST00000527733 WDR63Q8IWG1 891 aa18.81■□□□□ 0.6
USP47-207ENST00000527733 ARHGEF12Q9NZN5 1544 aa18.81■□□□□ 0.6
USP47-207ENST00000527733 STRN4Q9NRL3 753 aa18.81■□□□□ 0.6
USP47-207ENST00000527733 FOXO3O43524 673 aa18.8■□□□□ 0.6
USP47-207ENST00000527733 EXOSC9Q06265 439 aaKnown RBP18.8■□□□□ 0.6
USP47-207ENST00000527733 ANP32EQ9BTT0 268 aa18.8■□□□□ 0.6
USP47-207ENST00000527733 TRIM6-TRIM34B2RNG4 842 aa18.79■□□□□ 0.6
USP47-207ENST00000527733 MYO5CQ9NQX4 1742 aa18.79■□□□□ 0.6
USP47-207ENST00000527733 ANKRD45Q5TZF3 282 aa18.79■□□□□ 0.6
USP47-207ENST00000527733 NOP58Q9Y2X3 529 aaKnown RBP18.78■□□□□ 0.6
USP47-207ENST00000527733 AAMPQ13685 434 aa18.78■□□□□ 0.6
USP47-207ENST00000527733 ZC3H6P61129 1189 aaKnown RBP18.78■□□□□ 0.6
USP47-207ENST00000527733 TOM1L2Q6ZVM7 507 aa18.78■□□□□ 0.6
USP47-207ENST00000527733 MAST1Q9Y2H9 1570 aa18.78■□□□□ 0.6
USP47-207ENST00000527733 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
USP47-207ENST00000527733 NSD2O96028 1365 aa18.78■□□□□ 0.6
USP47-207ENST00000527733 ZNF530Q6P9A1 599 aaPredicted RBP18.77■□□□□ 0.6
USP47-207ENST00000527733 TWISTNBQ3B726 338 aaPredicted RBP18.76■□□□□ 0.59
USP47-207ENST00000527733 TMX4Q9H1E5 349 aaPredicted RBP18.76■□□□□ 0.59
USP47-207ENST00000527733 NAP1L2Q9ULW6 460 aaPredicted RBP18.76■□□□□ 0.59
USP47-207ENST00000527733 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
USP47-207ENST00000527733 PANK1Q8TE04 598 aa18.75■□□□□ 0.59
USP47-207ENST00000527733 ERCC6L2Q5T890 1561 aa18.75■□□□□ 0.59
USP47-207ENST00000527733 CCDC30Q5VVM6 783 aa18.75■□□□□ 0.59
USP47-207ENST00000527733 TESK2Q96S53 571 aa18.74■□□□□ 0.59
USP47-207ENST00000527733 EIF2AK4Q9P2K8 1649 aaKnown RBP18.74■□□□□ 0.59
USP47-207ENST00000527733 ACEP12821 1306 aa18.74■□□□□ 0.59
USP47-207ENST00000527733 TMPOP42166 694 aaKnown RBP18.74■□□□□ 0.59
USP47-207ENST00000527733 MFAP1P55081 439 aaKnown RBP18.74■□□□□ 0.59
USP47-207ENST00000527733 NFE2L2Q16236 605 aa18.74■□□□□ 0.59
USP47-207ENST00000527733 CADPS2Q86UW7 1296 aa18.74■□□□□ 0.59
USP47-207ENST00000527733 PUS7Q96PZ0 661 aaKnown RBP18.74■□□□□ 0.59
USP47-207ENST00000527733 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
USP47-207ENST00000527733 SPG7Q9UQ90 795 aa18.73■□□□□ 0.59
USP47-207ENST00000527733 EMILIN1Q9Y6C2 1016 aa18.73■□□□□ 0.59
USP47-207ENST00000527733 CFAP74Q9C0B2 1584 aa18.72■□□□□ 0.59
USP47-207ENST00000527733 ZCCHC11Q5TAX3 1644 aaKnown RBP18.72■□□□□ 0.59
USP47-207ENST00000527733 RIC3Q7Z5B4 369 aa18.71■□□□□ 0.59
USP47-207ENST00000527733 WWC1Q8IX03 1113 aa18.71■□□□□ 0.59
USP47-207ENST00000527733 TTC37Q6PGP7 1564 aa18.71■□□□□ 0.59
USP47-207ENST00000527733 SAMD9LQ8IVG5 1584 aa18.71■□□□□ 0.59
USP47-207ENST00000527733 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
USP47-207ENST00000527733 YEATS2Q9ULM3 1422 aa18.7■□□□□ 0.58
USP47-207ENST00000527733 AIMP1Q12904 312 aaKnown RBP18.7■□□□□ 0.58
USP47-207ENST00000527733 TBX22Q9Y458 520 aa18.7■□□□□ 0.58
USP47-207ENST00000527733 NUTM2BA6NNL0 878 aaPredicted RBP18.7■□□□□ 0.58
USP47-207ENST00000527733 NUTM2EB1AL46 878 aaPredicted RBP18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms