RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 DLC1Q96QB1 1528 aa21.8■■□□□ 1.08
SNRNP35-204ENST00000527158 PPP2R1AP30153 589 aa21.78■■□□□ 1.08
SNRNP35-204ENST00000527158 NRXN3Q9Y4C0 1643 aa21.78■■□□□ 1.08
SNRNP35-204ENST00000527158 SETD1AO15047 1707 aaKnown RBP21.78■■□□□ 1.08
SNRNP35-204ENST00000527158 EID1Q9Y6B2 187 aa21.78■■□□□ 1.08
SNRNP35-204ENST00000527158 NINLQ9Y2I6 1382 aa21.77■■□□□ 1.08
SNRNP35-204ENST00000527158 METP08581 1390 aa21.76■■□□□ 1.07
SNRNP35-204ENST00000527158 NEFLP07196 543 aa21.76■■□□□ 1.07
SNRNP35-204ENST00000527158 TXNDC2Q86VQ3 553 aa21.76■■□□□ 1.07
SNRNP35-204ENST00000527158 ATAD2Q6PL18 1390 aa21.75■■□□□ 1.07
SNRNP35-204ENST00000527158 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
SNRNP35-204ENST00000527158 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
SNRNP35-204ENST00000527158 ANKRD36BQ8N2N9 1353 aa21.74■■□□□ 1.07
SNRNP35-204ENST00000527158 PLEKHG1Q9ULL1 1385 aa21.74■■□□□ 1.07
SNRNP35-204ENST00000527158 LTKP29376 864 aa21.74■■□□□ 1.07
SNRNP35-204ENST00000527158 WAPLQ7Z5K2 1190 aa21.73■■□□□ 1.07
SNRNP35-204ENST00000527158 SIRT1Q96EB6 747 aa21.72■■□□□ 1.07
SNRNP35-204ENST00000527158 CDK19Q9BWU1 502 aa21.72■■□□□ 1.07
SNRNP35-204ENST00000527158 CGNL1Q0VF96 1302 aa21.71■■□□□ 1.07
SNRNP35-204ENST00000527158 SLIT1O75093 1534 aa21.7■■□□□ 1.06
SNRNP35-204ENST00000527158 INSRP06213 1382 aa21.7■■□□□ 1.06
SNRNP35-204ENST00000527158 ARHGAP23Q9P227 1491 aa21.69■■□□□ 1.06
SNRNP35-204ENST00000527158 PLEKHH1Q9ULM0 1364 aa21.69■■□□□ 1.06
SNRNP35-204ENST00000527158 FAM135BQ49AJ0 1406 aa21.69■■□□□ 1.06
SNRNP35-204ENST00000527158 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
SNRNP35-204ENST00000527158 MORC1Q86VD1 984 aa21.68■■□□□ 1.06
SNRNP35-204ENST00000527158 TERF2IPQ9NYB0 399 aa21.68■■□□□ 1.06
SNRNP35-204ENST00000527158 TECPR2O15040 1411 aa21.68■■□□□ 1.06
SNRNP35-204ENST00000527158 RIMS1Q86UR5 1692 aaKnown RBP21.66■■□□□ 1.06
SNRNP35-204ENST00000527158 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
SNRNP35-204ENST00000527158 FKBP8Q14318 412 aa21.66■■□□□ 1.06
SNRNP35-204ENST00000527158 WDR43Q15061 677 aaKnown RBP eCLIP21.66■■□□□ 1.06
SNRNP35-204ENST00000527158 TSHZ2Q9NRE2 1034 aa21.66■■□□□ 1.06
SNRNP35-204ENST00000527158 KNDC1Q76NI1 1749 aa21.65■■□□□ 1.06
SNRNP35-204ENST00000527158 NSD2O96028 1365 aa21.65■■□□□ 1.06
SNRNP35-204ENST00000527158 A0A1W2PP64 1363 aa21.64■■□□□ 1.05
SNRNP35-204ENST00000527158 HDGFL2Q7Z4V5 671 aaPredicted RBP21.64■■□□□ 1.05
SNRNP35-204ENST00000527158 CPS1P31327 1500 aa21.63■■□□□ 1.05
SNRNP35-204ENST00000527158 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
SNRNP35-204ENST00000527158 SLC26A8Q96RN1 970 aa21.63■■□□□ 1.05
SNRNP35-204ENST00000527158 MED14O60244 1454 aa21.62■■□□□ 1.05
SNRNP35-204ENST00000527158 CABP1Q9NZU7 370 aa21.62■■□□□ 1.05
SNRNP35-204ENST00000527158 ADAMTS8Q9UP79 889 aa21.62■■□□□ 1.05
SNRNP35-204ENST00000527158 TBX22Q9Y458 520 aa21.62■■□□□ 1.05
SNRNP35-204ENST00000527158 BLMP54132 1417 aaPredicted RBP21.61■■□□□ 1.05
SNRNP35-204ENST00000527158 ADAMTSL3P82987 1691 aa21.61■■□□□ 1.05
SNRNP35-204ENST00000527158 CEP170BQ9Y4F5 1589 aaPredicted RBP21.6■■□□□ 1.05
SNRNP35-204ENST00000527158 SENP3-EIF4A1A0A087X0R7 540 aa21.6■■□□□ 1.05
SNRNP35-204ENST00000527158 SMG6Q86US8 1419 aaKnown RBP21.59■■□□□ 1.05
SNRNP35-204ENST00000527158 ROBO2Q9HCK4 1378 aa21.59■■□□□ 1.05
SNRNP35-204ENST00000527158 TNNT2P45379 298 aaPredicted RBP21.58■■□□□ 1.04
SNRNP35-204ENST00000527158 CD163L1Q9NR16 1453 aa21.58■■□□□ 1.04
SNRNP35-204ENST00000527158 NUDCQ9Y266 331 aa21.57■■□□□ 1.04
SNRNP35-204ENST00000527158 POLR3AO14802 1390 aaPredicted RBP21.57■■□□□ 1.04
SNRNP35-204ENST00000527158 AMOTL2Q9Y2J4 779 aa21.55■■□□□ 1.04
SNRNP35-204ENST00000527158 DIP2AQ14689 1571 aa21.55■■□□□ 1.04
SNRNP35-204ENST00000527158 PDE3BQ13370 1112 aa21.55■■□□□ 1.04
SNRNP35-204ENST00000527158 ATP7BP35670 1465 aa21.55■■□□□ 1.04
SNRNP35-204ENST00000527158 SALL2Q9Y467 1007 aaPredicted RBP21.54■■□□□ 1.04
SNRNP35-204ENST00000527158 NUDT16Q96DE0 195 aaKnown RBP21.54■■□□□ 1.04
SNRNP35-204ENST00000527158 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
SNRNP35-204ENST00000527158 ANKLE2Q86XL3 938 aa21.53■■□□□ 1.04
SNRNP35-204ENST00000527158 CCDC61Q9Y6R9 512 aa21.53■■□□□ 1.04
SNRNP35-204ENST00000527158 PPIP5K1Q6PFW1 1433 aa21.52■■□□□ 1.04
SNRNP35-204ENST00000527158 FYB1O15117 783 aa21.52■■□□□ 1.04
SNRNP35-204ENST00000527158 ERICH6BQ5W0A0 696 aa21.52■■□□□ 1.04
SNRNP35-204ENST00000527158 CFAP53Q96M91 514 aa21.52■■□□□ 1.04
SNRNP35-204ENST00000527158 GGNBP2Q9H3C7 697 aa21.51■■□□□ 1.03
SNRNP35-204ENST00000527158 MTHFSP49914 203 aa21.51■■□□□ 1.03
SNRNP35-204ENST00000527158 ZNF142P52746 1687 aaPredicted RBP21.49■■□□□ 1.03
SNRNP35-204ENST00000527158 PTCH1Q13635 1447 aa21.49■■□□□ 1.03
SNRNP35-204ENST00000527158 PIK3R4Q99570 1358 aa21.48■■□□□ 1.03
SNRNP35-204ENST00000527158 SETD1BQ9UPS6 1966 aaKnown RBP21.48■■□□□ 1.03
SNRNP35-204ENST00000527158 ADGRB2O60241 1585 aa21.48■■□□□ 1.03
SNRNP35-204ENST00000527158 CPSF1Q10570 1443 aaKnown RBP21.47■■□□□ 1.03
SNRNP35-204ENST00000527158 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
SNRNP35-204ENST00000527158 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.46■■□□□ 1.03
SNRNP35-204ENST00000527158 ZNF692Q9BU19 519 aaPredicted RBP21.46■■□□□ 1.03
SNRNP35-204ENST00000527158 EDC4Q6P2E9 1401 aaKnown RBP21.45■■□□□ 1.02
SNRNP35-204ENST00000527158 PRR36Q9H6K5 1346 aa21.44■■□□□ 1.02
SNRNP35-204ENST00000527158 CCDC146Q8IYE0 955 aa21.43■■□□□ 1.02
SNRNP35-204ENST00000527158 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
SNRNP35-204ENST00000527158 NCKAP5LQ9HCH0 1330 aa21.43■■□□□ 1.02
SNRNP35-204ENST00000527158 CDC42BPGQ6DT37 1551 aa21.43■■□□□ 1.02
SNRNP35-204ENST00000527158 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
SNRNP35-204ENST00000527158 KIF20BQ96Q89 1820 aa21.41■■□□□ 1.02
SNRNP35-204ENST00000527158 KCNA6P17658 529 aa21.4■■□□□ 1.02
SNRNP35-204ENST00000527158 XRN1Q8IZH2 1706 aaKnown RBP21.4■■□□□ 1.02
SNRNP35-204ENST00000527158 PLEKHG3A1L390 1219 aa21.39■■□□□ 1.01
SNRNP35-204ENST00000527158 APAF1O14727 1248 aa21.39■■□□□ 1.01
SNRNP35-204ENST00000527158 IRX6P78412 446 aaPredicted RBP21.39■■□□□ 1.01
SNRNP35-204ENST00000527158 CDCA7LQ96GN5 454 aa21.39■■□□□ 1.01
SNRNP35-204ENST00000527158 NUTM2FA1L443 756 aa21.38■■□□□ 1.01
SNRNP35-204ENST00000527158 SHPRHQ149N8 1683 aa21.38■■□□□ 1.01
SNRNP35-204ENST00000527158 RUNDC1Q96C34 613 aa21.36■■□□□ 1.01
SNRNP35-204ENST00000527158 ITSN1Q15811 1721 aa21.35■■□□□ 1.01
SNRNP35-204ENST00000527158 ACEP12821 1306 aa21.35■■□□□ 1.01
SNRNP35-204ENST00000527158 RNF123Q5XPI4 1314 aa21.35■■□□□ 1.01
SNRNP35-204ENST00000527158 ZNF521Q96K83 1311 aa21.35■■□□□ 1.01
SNRNP35-204ENST00000527158 GOLGA2Q08379 1002 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms