RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 FGD5Q6ZNL6 1462 aa10□□□□□ -0.81
ATPAF1-208ENST00000526821 LOC105371045A0A1W2PR82 267 aa10□□□□□ -0.81
ATPAF1-208ENST00000526821 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
ATPAF1-208ENST00000526821 FAM9AQ8IZU1 332 aaPredicted RBP10□□□□□ -0.81
ATPAF1-208ENST00000526821 NKX2-3Q8TAU0 364 aa10□□□□□ -0.81
ATPAF1-208ENST00000526821 AK7Q96M32 723 aa10□□□□□ -0.81
ATPAF1-208ENST00000526821 ADH1BP00325 375 aa9.99□□□□□ -0.81
ATPAF1-208ENST00000526821 USP46P62068 366 aa9.99□□□□□ -0.81
ATPAF1-208ENST00000526821 SCUBE3Q8IX30 993 aa9.99□□□□□ -0.81
ATPAF1-208ENST00000526821 KDM4AO75164 1064 aa9.98□□□□□ -0.81
ATPAF1-208ENST00000526821 FAM217BQ9NTX9 383 aaPredicted RBP9.98□□□□□ -0.81
ATPAF1-208ENST00000526821 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
ATPAF1-208ENST00000526821 TLL1O43897 1013 aa9.97□□□□□ -0.81
ATPAF1-208ENST00000526821 AMHR2Q16671 573 aa9.97□□□□□ -0.81
ATPAF1-208ENST00000526821 MORN1Q5T089 497 aa9.97□□□□□ -0.81
ATPAF1-208ENST00000526821 NUTM1Q86Y26 1132 aa9.97□□□□□ -0.81
ATPAF1-208ENST00000526821 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
ATPAF1-208ENST00000526821 FMNL1O95466 1100 aaPredicted RBP9.96□□□□□ -0.82
ATPAF1-208ENST00000526821 Q3C1V9 767 aa9.96□□□□□ -0.82
ATPAF1-208ENST00000526821 SPSB2Q99619 263 aa9.96□□□□□ -0.82
ATPAF1-208ENST00000526821 SLC6A16Q9GZN6 736 aa9.95□□□□□ -0.82
ATPAF1-208ENST00000526821 KIF27Q86VH2 1401 aa9.95□□□□□ -0.82
ATPAF1-208ENST00000526821 ABCA10Q8WWZ4 1543 aa9.94□□□□□ -0.82
ATPAF1-208ENST00000526821 SSTR3P32745 418 aaPredicted RBP9.94□□□□□ -0.82
ATPAF1-208ENST00000526821 SALL2Q9Y467 1007 aaPredicted RBP9.94□□□□□ -0.82
ATPAF1-208ENST00000526821 WDR62O43379 1518 aa9.93□□□□□ -0.82
ATPAF1-208ENST00000526821 PRKD2Q9BZL6 878 aa9.93□□□□□ -0.82
ATPAF1-208ENST00000526821 SLC27A5Q9Y2P5 690 aa9.93□□□□□ -0.82
ATPAF1-208ENST00000526821 RAD54L2Q9Y4B4 1467 aa9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 TRIM66O15016 1216 aa9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 S1PR4O95977 384 aa9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 GIGYF2Q6Y7W6 1299 aaKnown RBP9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 KIF21BO75037 1637 aa9.92□□□□□ -0.82
ATPAF1-208ENST00000526821 CUX2O14529 1486 aa9.91□□□□□ -0.82
ATPAF1-208ENST00000526821 ANKLE1Q8NAG6 615 aa9.91□□□□□ -0.82
ATPAF1-208ENST00000526821 THOC2Q8NI27 1593 aaKnown RBP9.91□□□□□ -0.82
ATPAF1-208ENST00000526821 ERCC6Q03468 1493 aa9.91□□□□□ -0.82
ATPAF1-208ENST00000526821 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
ATPAF1-208ENST00000526821 WDR97A6NE52 1622 aa9.9□□□□□ -0.82
ATPAF1-208ENST00000526821 RNF223E7ERA6 249 aa9.9□□□□□ -0.82
ATPAF1-208ENST00000526821 DIXDC1Q155Q3 683 aa9.9□□□□□ -0.82
ATPAF1-208ENST00000526821 IGF1RP08069 1367 aa9.89□□□□□ -0.83
ATPAF1-208ENST00000526821 SLC24A3Q9HC58 644 aa9.89□□□□□ -0.83
ATPAF1-208ENST00000526821 TARBP1Q13395 1621 aaKnown RBP9.89□□□□□ -0.83
ATPAF1-208ENST00000526821 GOLGA3Q08378 1498 aa9.88□□□□□ -0.83
ATPAF1-208ENST00000526821 HOXA2O43364 376 aa9.88□□□□□ -0.83
ATPAF1-208ENST00000526821 REPIN1Q9BWE0 567 aaKnown RBP9.88□□□□□ -0.83
ATPAF1-208ENST00000526821 BRICD5Q6PL45 260 aa9.87□□□□□ -0.83
ATPAF1-208ENST00000526821 PARP9Q8IXQ6 854 aa9.87□□□□□ -0.83
ATPAF1-208ENST00000526821 THAP11Q96EK4 314 aa9.87□□□□□ -0.83
ATPAF1-208ENST00000526821 TNIKQ9UKE5 1360 aa9.87□□□□□ -0.83
ATPAF1-208ENST00000526821 ERICH3Q5RHP9 1530 aa9.87□□□□□ -0.83
ATPAF1-208ENST00000526821 PDE4DQ08499 809 aa9.86□□□□□ -0.83
ATPAF1-208ENST00000526821 ABCA5Q8WWZ7 1642 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 RAPGEF2Q9Y4G8 1499 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 SLC19A1P41440 591 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 LAPTM4AQ15012 233 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 MSS51Q4VC12 460 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 BEGAINQ9BUH8 593 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 IFT140Q96RY7 1462 aa9.85□□□□□ -0.83
ATPAF1-208ENST00000526821 RNF19BQ6ZMZ0 732 aa9.84□□□□□ -0.83
ATPAF1-208ENST00000526821 USB1Q9BQ65 265 aaKnown RBP9.84□□□□□ -0.83
ATPAF1-208ENST00000526821 PPEF1O14829 653 aaPredicted RBP9.83□□□□□ -0.84
ATPAF1-208ENST00000526821 FDX1P10109 184 aa9.83□□□□□ -0.84
ATPAF1-208ENST00000526821 SPIRE2Q8WWL2 714 aa9.82□□□□□ -0.84
ATPAF1-208ENST00000526821 TDRD9Q8NDG6 1382 aaKnown RBP9.82□□□□□ -0.84
ATPAF1-208ENST00000526821 GAPVD1Q14C86 1478 aa9.81□□□□□ -0.84
ATPAF1-208ENST00000526821 CARMIL1Q5VZK9 1371 aa9.81□□□□□ -0.84
ATPAF1-208ENST00000526821 FAM160A2Q8N612 972 aaPredicted RBP9.81□□□□□ -0.84
ATPAF1-208ENST00000526821 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
ATPAF1-208ENST00000526821 ZBTB24O43167 697 aaPredicted RBP9.8□□□□□ -0.84
ATPAF1-208ENST00000526821 FCF1Q9Y324 198 aaKnown RBP9.8□□□□□ -0.84
ATPAF1-208ENST00000526821 HLA-CQ95604 372 aa9.79□□□□□ -0.84
ATPAF1-208ENST00000526821 CUL7Q14999 1698 aa9.79□□□□□ -0.84
ATPAF1-208ENST00000526821 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
ATPAF1-208ENST00000526821 ZNF608Q9ULD9 1512 aaPredicted RBP9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 MS4A1P11836 297 aa9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 UBTFP17480 764 aaKnown RBP9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 SPRYD7Q5W111 196 aa9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 RETREG3Q86VR2 466 aa9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 TBC1D2Q9BYX2 928 aa9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 AQRO60306 1485 aaKnown RBP eCLIP9.78□□□□□ -0.84
ATPAF1-208ENST00000526821 SPDYE5A6NIY4 337 aa9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 GFRA3O60609 400 aa9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 CD2BP2O95400 341 aaKnown RBP9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 GJA5P36382 358 aa9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 RPIAP49247 311 aa9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 ZNF598Q86UK7 904 aaKnown RBP9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 PRDM9Q9NQV7 894 aa9.77□□□□□ -0.85
ATPAF1-208ENST00000526821 MOXD2PA6NHM9 499 aa9.76□□□□□ -0.85
ATPAF1-208ENST00000526821 MMP16P51512 607 aa9.76□□□□□ -0.85
ATPAF1-208ENST00000526821 GRIN2BQ13224 1484 aa9.76□□□□□ -0.85
ATPAF1-208ENST00000526821 NDUFV2P19404 249 aa9.75□□□□□ -0.85
ATPAF1-208ENST00000526821 ZNF697Q5TEC3 545 aa9.75□□□□□ -0.85
ATPAF1-208ENST00000526821 LIAT1Q6ZQX7 453 aa9.75□□□□□ -0.85
ATPAF1-208ENST00000526821 RSPH6AQ9H0K4 717 aa9.75□□□□□ -0.85
ATPAF1-208ENST00000526821 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms