RNA–Protein interactions for RNA: ENST00000525821.1

CTNND1-211, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-211ENST00000525821 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
CTNND1-211ENST00000525821 FDX1P10109 184 aa12.74□□□□□ -0.37
CTNND1-211ENST00000525821 GGCXP38435 758 aa12.74□□□□□ -0.37
CTNND1-211ENST00000525821 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.74□□□□□ -0.37
CTNND1-211ENST00000525821 BRPF1P55201 1214 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-211ENST00000525821 RNF19BQ6ZMZ0 732 aa12.73□□□□□ -0.37
CTNND1-211ENST00000525821 FAM117AQ9C073 453 aa12.73□□□□□ -0.37
CTNND1-211ENST00000525821 DDRGK1Q96HY6 314 aa12.72□□□□□ -0.37
CTNND1-211ENST00000525821 SLC6A16Q9GZN6 736 aa12.72□□□□□ -0.37
CTNND1-211ENST00000525821 PCDHGC3Q9UN70 934 aa12.72□□□□□ -0.37
CTNND1-211ENST00000525821 GJA5P36382 358 aa12.71□□□□□ -0.37
CTNND1-211ENST00000525821 S1PR4O95977 384 aa12.7□□□□□ -0.38
CTNND1-211ENST00000525821 RSBN1LQ6PCB5 846 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-211ENST00000525821 FAM160A2Q8N612 972 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-211ENST00000525821 RSPH6AQ9H0K4 717 aa12.7□□□□□ -0.38
CTNND1-211ENST00000525821 SPTLC1O15269 473 aa12.69□□□□□ -0.38
CTNND1-211ENST00000525821 MYSM1Q5VVJ2 828 aa12.69□□□□□ -0.38
CTNND1-211ENST00000525821 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
CTNND1-211ENST00000525821 ZCCHC6Q5VYS8 1495 aaKnown RBP12.68□□□□□ -0.38
CTNND1-211ENST00000525821 RGS20O76081 388 aa12.68□□□□□ -0.38
CTNND1-211ENST00000525821 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
CTNND1-211ENST00000525821 USB1Q9BQ65 265 aaKnown RBP12.68□□□□□ -0.38
CTNND1-211ENST00000525821 RNF223E7ERA6 249 aa12.67□□□□□ -0.38
CTNND1-211ENST00000525821 MSS51Q4VC12 460 aa12.67□□□□□ -0.38
CTNND1-211ENST00000525821 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
CTNND1-211ENST00000525821 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
CTNND1-211ENST00000525821 PPEF1O14829 653 aaPredicted RBP12.64□□□□□ -0.39
CTNND1-211ENST00000525821 RETREG3Q86VR2 466 aa12.64□□□□□ -0.39
CTNND1-211ENST00000525821 PCDHB15Q9Y5E8 787 aa12.64□□□□□ -0.39
CTNND1-211ENST00000525821 ANKLE1Q8NAG6 615 aa12.63□□□□□ -0.39
CTNND1-211ENST00000525821 POLR3EQ9NVU0 708 aa12.63□□□□□ -0.39
CTNND1-211ENST00000525821 LIMD1Q9UGP4 676 aa12.63□□□□□ -0.39
CTNND1-211ENST00000525821 DCAF1Q9Y4B6 1507 aa12.62□□□□□ -0.39
CTNND1-211ENST00000525821 MTMR2Q13614 643 aa12.62□□□□□ -0.39
CTNND1-211ENST00000525821 PRDM9Q9NQV7 894 aa12.62□□□□□ -0.39
CTNND1-211ENST00000525821 SPDYE5A6NIY4 337 aa12.61□□□□□ -0.39
CTNND1-211ENST00000525821 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
CTNND1-211ENST00000525821 TUSC1Q2TAM9 212 aa12.61□□□□□ -0.39
CTNND1-211ENST00000525821 SH3D19Q5HYK7 790 aa12.61□□□□□ -0.39
CTNND1-211ENST00000525821 IL27Q8NEV9 243 aa12.61□□□□□ -0.39
CTNND1-211ENST00000525821 CUX2O14529 1486 aa12.6□□□□□ -0.39
CTNND1-211ENST00000525821 CLK2P49760 499 aaKnown RBP12.6□□□□□ -0.39
CTNND1-211ENST00000525821 MMP16P51512 607 aa12.6□□□□□ -0.39
CTNND1-211ENST00000525821 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
CTNND1-211ENST00000525821 HRCP23327 699 aa12.59□□□□□ -0.39
CTNND1-211ENST00000525821 PRPF38BQ5VTL8 546 aaKnown RBP12.59□□□□□ -0.39
CTNND1-211ENST00000525821 ZBTB3Q9H5J0 574 aa12.59□□□□□ -0.39
CTNND1-211ENST00000525821 DXOO77932 396 aaKnown RBP12.57□□□□□ -0.4
CTNND1-211ENST00000525821 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
CTNND1-211ENST00000525821 JUNDP17535 347 aa12.56□□□□□ -0.4
CTNND1-211ENST00000525821 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
CTNND1-211ENST00000525821 CABLES1Q8TDN4 633 aa12.56□□□□□ -0.4
CTNND1-211ENST00000525821 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
CTNND1-211ENST00000525821 ERCC6Q03468 1493 aa12.56□□□□□ -0.4
CTNND1-211ENST00000525821 LILRB3O75022 631 aa12.55□□□□□ -0.4
CTNND1-211ENST00000525821 QPCTQ16769 361 aa12.55□□□□□ -0.4
CTNND1-211ENST00000525821 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
CTNND1-211ENST00000525821 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-211ENST00000525821 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-211ENST00000525821 NUTM2DQ5VT03 806 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-211ENST00000525821 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-211ENST00000525821 PROCA1Q8NCQ7 364 aaPredicted RBP12.54□□□□□ -0.4
CTNND1-211ENST00000525821 GOPCQ9HD26 462 aa12.53□□□□□ -0.4
CTNND1-211ENST00000525821 ATP1B4Q9UN42 357 aaPredicted RBP12.53□□□□□ -0.4
CTNND1-211ENST00000525821 SLC19A1P41440 591 aa12.52□□□□□ -0.41
CTNND1-211ENST00000525821 PLA2G2CQ5R387 149 aa12.52□□□□□ -0.41
CTNND1-211ENST00000525821 EMID1Q96A84 441 aaPredicted RBP12.52□□□□□ -0.41
CTNND1-211ENST00000525821 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
CTNND1-211ENST00000525821 CFAP99D6REC4 459 aa12.5□□□□□ -0.41
CTNND1-211ENST00000525821 RTL5Q5HYW3 569 aaPredicted RBP12.5□□□□□ -0.41
CTNND1-211ENST00000525821 LIAT1Q6ZQX7 453 aa12.5□□□□□ -0.41
CTNND1-211ENST00000525821 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.5□□□□□ -0.41
CTNND1-211ENST00000525821 CCDC24Q8N4L8 307 aa12.48□□□□□ -0.41
CTNND1-211ENST00000525821 PCMTD1Q96MG8 357 aaPredicted RBP12.48□□□□□ -0.41
CTNND1-211ENST00000525821 NUDT12Q9BQG2 462 aa12.47□□□□□ -0.41
CTNND1-211ENST00000525821 ZBTB24O43167 697 aaPredicted RBP12.46□□□□□ -0.41
CTNND1-211ENST00000525821 RPIAP49247 311 aa12.46□□□□□ -0.41
CTNND1-211ENST00000525821 PTPRNQ16849 979 aa12.46□□□□□ -0.41
CTNND1-211ENST00000525821 SPRYD7Q5W111 196 aa12.45□□□□□ -0.42
CTNND1-211ENST00000525821 PPP2R2DQ66LE6 453 aa12.45□□□□□ -0.42
CTNND1-211ENST00000525821 TSC1Q92574 1164 aa12.45□□□□□ -0.42
CTNND1-211ENST00000525821 LYPD8Q6UX82 237 aa12.44□□□□□ -0.42
CTNND1-211ENST00000525821 CCNYL3P0C7X3 344 aa12.43□□□□□ -0.42
CTNND1-211ENST00000525821 FBXO31Q5XUX0 539 aaPredicted RBP12.43□□□□□ -0.42
CTNND1-211ENST00000525821 CD2BP2O95400 341 aaKnown RBP12.42□□□□□ -0.42
CTNND1-211ENST00000525821 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
CTNND1-211ENST00000525821 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
CTNND1-211ENST00000525821 EVA1BQ9NVM1 165 aa12.42□□□□□ -0.42
CTNND1-211ENST00000525821 KCNH2Q12809 1159 aa12.39□□□□□ -0.43
CTNND1-211ENST00000525821 ZNF697Q5TEC3 545 aa12.39□□□□□ -0.43
CTNND1-211ENST00000525821 PTCRAQ6ISU1 281 aaPredicted RBP12.39□□□□□ -0.43
CTNND1-211ENST00000525821 PER1O15534 1290 aaPredicted RBP12.38□□□□□ -0.43
CTNND1-211ENST00000525821 NESP48681 1621 aa12.37□□□□□ -0.43
CTNND1-211ENST00000525821 CTDSPL2Q05D32 466 aa12.37□□□□□ -0.43
CTNND1-211ENST00000525821 TRIM32Q13049 653 aa12.37□□□□□ -0.43
CTNND1-211ENST00000525821 CTHP32929 405 aa12.36□□□□□ -0.43
CTNND1-211ENST00000525821 RFC5P40937 340 aa12.36□□□□□ -0.43
CTNND1-211ENST00000525821 NCAPD3P42695 1498 aa12.35□□□□□ -0.43
CTNND1-211ENST00000525821 F12P00748 615 aaPredicted RBP12.35□□□□□ -0.43
CTNND1-211ENST00000525821 IRX2Q9BZI1 471 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms