RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 NKTRP30414 1462 aaKnown RBP8.94□□□□□ -0.98
ATPAF1-207ENST00000525633 ST20-MTHFSA0A0A6YYL1 179 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 ATF3P18847 181 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 POTEAQ6S8J7 498 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 CADPS2Q86UW7 1296 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 PIK3R4Q99570 1358 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 NCOA3Q9Y6Q9 1424 aa8.93□□□□□ -0.98
ATPAF1-207ENST00000525633 LRPPRCP42704 1394 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-207ENST00000525633 EIF3AQ14152 1382 aaKnown RBP8.92□□□□□ -0.98
ATPAF1-207ENST00000525633 PTPRUQ92729 1446 aa8.91□□□□□ -0.98
ATPAF1-207ENST00000525633 SAFB2Q14151 953 aaKnown RBP eCLIP8.91□□□□□ -0.98
ATPAF1-207ENST00000525633 POGKQ9P215 609 aa8.91□□□□□ -0.98
ATPAF1-207ENST00000525633 XRN1Q8IZH2 1706 aaKnown RBP8.91□□□□□ -0.98
ATPAF1-207ENST00000525633 JCADQ9P266 1359 aa8.9□□□□□ -0.98
ATPAF1-207ENST00000525633 CENPJQ9HC77 1338 aaPredicted RBP8.9□□□□□ -0.98
ATPAF1-207ENST00000525633 WAPLQ7Z5K2 1190 aa8.9□□□□□ -0.98
ATPAF1-207ENST00000525633 PRAM1Q96QH2 718 aa8.9□□□□□ -0.98
ATPAF1-207ENST00000525633 DLC1Q96QB1 1528 aa8.9□□□□□ -0.99
ATPAF1-207ENST00000525633 ABCC11Q96J66 1382 aa8.89□□□□□ -0.99
ATPAF1-207ENST00000525633 POLR3GLQ9BT43 218 aa8.89□□□□□ -0.99
ATPAF1-207ENST00000525633 NWD1Q149M9 1564 aa8.89□□□□□ -0.99
ATPAF1-207ENST00000525633 BRINP3Q76B58 766 aa8.88□□□□□ -0.99
ATPAF1-207ENST00000525633 TESK2Q96S53 571 aa8.88□□□□□ -0.99
ATPAF1-207ENST00000525633 RGPD8O14715 1765 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-207ENST00000525633 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.88□□□□□ -0.99
ATPAF1-207ENST00000525633 ROBO2Q9HCK4 1378 aa8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 PLEKHH1Q9ULM0 1364 aa8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 MINK1Q8N4C8 1332 aaPredicted RBP8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 SIRT1Q96EB6 747 aa8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 TECPR2O15040 1411 aa8.87□□□□□ -0.99
ATPAF1-207ENST00000525633 SPATA31A6Q5VVP1 1343 aa8.86□□□□□ -0.99
ATPAF1-207ENST00000525633 TMF1P82094 1093 aa8.86□□□□□ -0.99
ATPAF1-207ENST00000525633 XIRP1Q702N8 1843 aaKnown RBP8.86□□□□□ -0.99
ATPAF1-207ENST00000525633 NALCNQ8IZF0 1738 aa8.85□□□□□ -0.99
ATPAF1-207ENST00000525633 CCDC7Q96M83 1385 aa8.85□□□□□ -0.99
ATPAF1-207ENST00000525633 KIF7Q2M1P5 1343 aa8.84□□□□□ -0.99
ATPAF1-207ENST00000525633 PTCH1Q13635 1447 aa8.84□□□□□ -0.99
ATPAF1-207ENST00000525633 MEX3CQ5U5Q3 659 aaKnown RBP8.84□□□□□ -0.99
ATPAF1-207ENST00000525633 ZNF772Q68DY9 489 aaPredicted RBP8.84□□□□□ -0.99
ATPAF1-207ENST00000525633 TULP4Q9NRJ4 1543 aa8.84□□□□□ -0.99
ATPAF1-207ENST00000525633 WASHC2AQ641Q2 1341 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 EVC2Q86UK5 1308 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 NUTM2BA6NNL0 878 aaPredicted RBP8.83□□□□□ -1
ATPAF1-207ENST00000525633 NUTM2EB1AL46 878 aaPredicted RBP8.83□□□□□ -1
ATPAF1-207ENST00000525633 SLC24A1O60721 1099 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 DDX10Q13206 875 aaKnown RBP8.83□□□□□ -1
ATPAF1-207ENST00000525633 CDCA8Q53HL2 280 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 NUTM2AQ8IVF1 878 aaPredicted RBP8.83□□□□□ -1
ATPAF1-207ENST00000525633 LRRC59Q96AG4 307 aaKnown RBP8.83□□□□□ -1
ATPAF1-207ENST00000525633 CDK19Q9BWU1 502 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 ROBO1Q9Y6N7 1651 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 SBNO2Q9Y2G9 1366 aa8.83□□□□□ -1
ATPAF1-207ENST00000525633 DCCP43146 1447 aa8.82□□□□□ -1
ATPAF1-207ENST00000525633 SRPK2P78362 688 aaKnown RBP8.82□□□□□ -1
ATPAF1-207ENST00000525633 DDX17Q92841 729 aaKnown RBP8.82□□□□□ -1
ATPAF1-207ENST00000525633 CABP2Q9NPB3 220 aa8.82□□□□□ -1
ATPAF1-207ENST00000525633 FMN2Q9NZ56 1722 aa8.82□□□□□ -1
ATPAF1-207ENST00000525633 MYOM1P52179 1685 aa8.81□□□□□ -1
ATPAF1-207ENST00000525633 ITSN1Q15811 1721 aa8.81□□□□□ -1
ATPAF1-207ENST00000525633 WASLO00401 505 aaPredicted RBP8.81□□□□□ -1
ATPAF1-207ENST00000525633 ADGRB2O60241 1585 aa8.81□□□□□ -1
ATPAF1-207ENST00000525633 MST1RQ04912 1400 aa8.8□□□□□ -1
ATPAF1-207ENST00000525633 RXRBP28702 533 aa8.8□□□□□ -1
ATPAF1-207ENST00000525633 TMC1Q8TDI8 760 aa8.8□□□□□ -1
ATPAF1-207ENST00000525633 LRP6O75581 1613 aa8.8□□□□□ -1
ATPAF1-207ENST00000525633 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
ATPAF1-207ENST00000525633 NUTM2FA1L443 756 aa8.79□□□□□ -1
ATPAF1-207ENST00000525633 ORAI2Q96SN7 254 aa8.79□□□□□ -1
ATPAF1-207ENST00000525633 USP32Q8NFA0 1604 aa8.79□□□□□ -1
ATPAF1-207ENST00000525633 NUDT16Q96DE0 195 aaKnown RBP8.78□□□□□ -1
ATPAF1-207ENST00000525633 AHDC1Q5TGY3 1603 aaPredicted RBP8.78□□□□□ -1
ATPAF1-207ENST00000525633 AKAP12Q02952 1782 aa8.78□□□□□ -1
ATPAF1-207ENST00000525633 AFF2P51816 1311 aa8.78□□□□□ -1
ATPAF1-207ENST00000525633 SOS2Q07890 1332 aaPredicted RBP8.78□□□□□ -1
ATPAF1-207ENST00000525633 CDC42BPGQ6DT37 1551 aa8.78□□□□□ -1
ATPAF1-207ENST00000525633 COL16A1Q07092 1604 aaPredicted RBP8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 DIEXFQ68CQ4 756 aaKnown RBP8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 UPF1Q92900 1129 aaKnown RBP eCLIP8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 C8orf37Q96NL8 207 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 PUS7Q96PZ0 661 aaKnown RBP8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 SLC12A5Q9H2X9 1139 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 QTRT2Q9H974 415 aaKnown RBP8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 PANK3Q9H999 370 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 TOPAZ1Q8N9V7 1692 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 PRR36Q9H6K5 1346 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 C1orf167Q5SNV9 1468 aa8.77□□□□□ -1.01
ATPAF1-207ENST00000525633 ATAD2Q6PL18 1390 aa8.76□□□□□ -1.01
ATPAF1-207ENST00000525633 PNPLA6Q8IY17 1366 aa8.76□□□□□ -1.01
ATPAF1-207ENST00000525633 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
ATPAF1-207ENST00000525633 NGLY1Q96IV0 654 aa8.76□□□□□ -1.01
ATPAF1-207ENST00000525633 PHLPP1O60346 1717 aa8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 PPIP5K1Q6PFW1 1433 aa8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 RBM6P78332 1123 aaKnown RBP8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 CABP1Q9NZU7 370 aa8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 CCDC61Q9Y6R9 512 aa8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 ATP7BP35670 1465 aa8.75□□□□□ -1.01
ATPAF1-207ENST00000525633 MON2Q7Z3U7 1717 aa8.74□□□□□ -1.01
ATPAF1-207ENST00000525633 CNGB1Q14028 1251 aaPredicted RBP8.74□□□□□ -1.01
ATPAF1-207ENST00000525633 ESCO1Q5FWF5 840 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms