RNA–Protein interactions for RNA: ENST00000524306.1

CLINT1-208, Transcript of clathrin interactor 1, humanhuman

TSL 1 (best)

Gene CLINT1, Length 2,905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-208ENST00000524306 NRXN3Q9Y4C0 1643 aa7.22□□□□□ -1.25
CLINT1-208ENST00000524306 C3P01024 1663 aa7.22□□□□□ -1.25
CLINT1-208ENST00000524306 ADGRB2O60241 1585 aa7.22□□□□□ -1.25
CLINT1-208ENST00000524306 SLIT1O75093 1534 aa7.22□□□□□ -1.25
CLINT1-208ENST00000524306 CENPJQ9HC77 1338 aaPredicted RBP7.22□□□□□ -1.25
CLINT1-208ENST00000524306 TCERG1O14776 1098 aaKnown RBP7.22□□□□□ -1.25
CLINT1-208ENST00000524306 CC2D1BQ5T0F9 858 aaKnown RBP7.22□□□□□ -1.25
CLINT1-208ENST00000524306 MED14O60244 1454 aa7.22□□□□□ -1.25
CLINT1-208ENST00000524306 ANKRD26Q9UPS8 1709 aa7.21□□□□□ -1.25
CLINT1-208ENST00000524306 CPS1P31327 1500 aa7.21□□□□□ -1.25
CLINT1-208ENST00000524306 ADAMTSL3P82987 1691 aa7.21□□□□□ -1.26
CLINT1-208ENST00000524306 CFAP70Q5T0N1 1121 aa7.21□□□□□ -1.26
CLINT1-208ENST00000524306 WDR43Q15061 677 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLINT1-208ENST00000524306 ADAMTS8Q9UP79 889 aa7.21□□□□□ -1.26
CLINT1-208ENST00000524306 A2ML1A8K2U0 1454 aa7.2□□□□□ -1.26
CLINT1-208ENST00000524306 TECPR2O15040 1411 aa7.2□□□□□ -1.26
CLINT1-208ENST00000524306 SHPRHQ149N8 1683 aa7.2□□□□□ -1.26
CLINT1-208ENST00000524306 VGFO15240 615 aaPredicted RBP7.2□□□□□ -1.26
CLINT1-208ENST00000524306 ARHGAP23Q9P227 1491 aa7.2□□□□□ -1.26
CLINT1-208ENST00000524306 DUSP27Q5VZP5 1158 aa7.2□□□□□ -1.26
CLINT1-208ENST00000524306 PLEKHH1Q9ULM0 1364 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 IQSEC2Q5JU85 1478 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 SLFN5Q08AF3 891 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 ALKQ9UM73 1620 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 RAPGEF3O95398 923 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 PRKCSHP14314 528 aaPredicted RBP7.19□□□□□ -1.26
CLINT1-208ENST00000524306 GOLGA2Q08379 1002 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 AAMPQ13685 434 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 TULP4Q9NRJ4 1543 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 ANKRD36BQ8N2N9 1353 aa7.19□□□□□ -1.26
CLINT1-208ENST00000524306 NKTRP30414 1462 aaKnown RBP7.19□□□□□ -1.26
CLINT1-208ENST00000524306 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.18□□□□□ -1.26
CLINT1-208ENST00000524306 CARD14Q9BXL6 1004 aa7.18□□□□□ -1.26
CLINT1-208ENST00000524306 CCDC27Q2M243 656 aa7.18□□□□□ -1.26
CLINT1-208ENST00000524306 E9PSI1 815 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 CGNL1Q0VF96 1302 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 PTPRMP28827 1452 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 EXOC6Q8TAG9 804 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
CLINT1-208ENST00000524306 EVC2Q86UK5 1308 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 KDM2BQ8NHM5 1336 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 USP54Q70EL1 1684 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 ZMYM3Q14202 1370 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 FAM135BQ49AJ0 1406 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 NSD3Q9BZ95 1437 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 TOPAZ1Q8N9V7 1692 aa7.16□□□□□ -1.26
CLINT1-208ENST00000524306 ATAD2Q6PL18 1390 aa7.15□□□□□ -1.26
CLINT1-208ENST00000524306 LRRC7Q96NW7 1537 aa7.15□□□□□ -1.26
CLINT1-208ENST00000524306 ABCC11Q96J66 1382 aa7.15□□□□□ -1.26
CLINT1-208ENST00000524306 CENPQQ7L2Z9 268 aaPredicted RBP7.15□□□□□ -1.27
CLINT1-208ENST00000524306 XRN1Q8IZH2 1706 aaKnown RBP7.15□□□□□ -1.27
CLINT1-208ENST00000524306 CDC42BPGQ6DT37 1551 aa7.15□□□□□ -1.27
CLINT1-208ENST00000524306 WDR63Q8IWG1 891 aa7.14□□□□□ -1.27
CLINT1-208ENST00000524306 PDE3AQ14432 1141 aa7.14□□□□□ -1.27
CLINT1-208ENST00000524306 IPO9Q96P70 1041 aaKnown RBP7.14□□□□□ -1.27
CLINT1-208ENST00000524306 CT47B1P0C2W7 299 aaPredicted RBP7.14□□□□□ -1.27
CLINT1-208ENST00000524306 ANP32AP39687 249 aaKnown RBP7.13□□□□□ -1.27
CLINT1-208ENST00000524306 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.13□□□□□ -1.27
CLINT1-208ENST00000524306 RUNDC1Q96C34 613 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 BACH2Q9BYV9 841 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 AKAP12Q02952 1782 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 COL3A1P02461 1466 aaPredicted RBP7.13□□□□□ -1.27
CLINT1-208ENST00000524306 GGT6Q6P531 493 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 MON2Q7Z3U7 1717 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 TNRQ92752 1358 aa7.13□□□□□ -1.27
CLINT1-208ENST00000524306 ITSN1Q15811 1721 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
CLINT1-208ENST00000524306 CFAP53Q96M91 514 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 CRBNQ96SW2 442 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 NOP58Q9Y2X3 529 aaKnown RBP7.12□□□□□ -1.27
CLINT1-208ENST00000524306 PLEKHG1Q9ULL1 1385 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 YTHDC2Q9H6S0 1430 aaKnown RBP7.12□□□□□ -1.27
CLINT1-208ENST00000524306 RIMS2Q9UQ26 1411 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 KIF20BQ96Q89 1820 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 IDI1Q13907 227 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 PIK3R4Q99570 1358 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 ATP7BP35670 1465 aa7.12□□□□□ -1.27
CLINT1-208ENST00000524306 CEP170BQ9Y4F5 1589 aaPredicted RBP7.12□□□□□ -1.27
CLINT1-208ENST00000524306 CFAP65Q6ZU64 1925 aaKnown RBP7.12□□□□□ -1.27
CLINT1-208ENST00000524306 PNPLA6Q8IY17 1366 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 PTCH1Q13635 1447 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 MORC1Q86VD1 984 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 CD163L1Q9NR16 1453 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 WWC1Q8IX03 1113 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 NRKQ7Z2Y5 1582 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 IL16Q14005 1332 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 APAF1O14727 1248 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 PDE4AP27815 886 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 ERICH6Q7L0X2 663 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
CLINT1-208ENST00000524306 NWD1Q149M9 1564 aa7.1□□□□□ -1.27
CLINT1-208ENST00000524306 HDGFP51858 240 aaKnown RBP7.1□□□□□ -1.27
CLINT1-208ENST00000524306 BCL11AQ9H165 835 aa7.1□□□□□ -1.27
CLINT1-208ENST00000524306 TMEM2Q9UHN6 1383 aa7.1□□□□□ -1.27
CLINT1-208ENST00000524306 SLC12A5Q9H2X9 1139 aa7.1□□□□□ -1.27
CLINT1-208ENST00000524306 SETD1BQ9UPS6 1966 aaKnown RBP7.09□□□□□ -1.27
CLINT1-208ENST00000524306 PNNQ9H307 717 aaKnown RBP7.09□□□□□ -1.27
CLINT1-208ENST00000524306 DNAJC5Q9H3Z4 198 aa7.09□□□□□ -1.27
CLINT1-208ENST00000524306 A0A1W2PP64 1363 aa7.09□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms