RNA–Protein interactions for RNA: ENST00000524157.2

SPIDR-226, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 267 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-226ENST00000524157 RDH13Q8NBN7 331 aa8.64□□□□□ -1.03
SPIDR-226ENST00000524157 TMEM134Q9H6X4 195 aa8.64□□□□□ -1.03
SPIDR-226ENST00000524157 HMX1Q9NP08 348 aaPredicted RBP8.64□□□□□ -1.03
SPIDR-226ENST00000524157 TFIP11Q9UBB9 837 aaKnown RBP8.64□□□□□ -1.03
SPIDR-226ENST00000524157 RSPH4AQ5TD94 716 aa8.63□□□□□ -1.03
SPIDR-226ENST00000524157 UCN2Q96RP3 112 aa8.63□□□□□ -1.03
SPIDR-226ENST00000524157 PPP1R3GB7ZBB8 358 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 HOXA2O43364 376 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 FDX1P10109 184 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 CTDSPL2Q05D32 466 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 NUDT18Q6ZVK8 323 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 FAM198AQ9UFP1 575 aa8.62□□□□□ -1.03
SPIDR-226ENST00000524157 MAFBQ9Y5Q3 323 aaPredicted RBP8.62□□□□□ -1.03
SPIDR-226ENST00000524157 PTPREP23469 700 aa8.61□□□□□ -1.03
SPIDR-226ENST00000524157 SEMA3FQ13275 785 aa8.61□□□□□ -1.03
SPIDR-226ENST00000524157 PNMA1Q8ND90 353 aa8.61□□□□□ -1.03
SPIDR-226ENST00000524157 MTMR2Q13614 643 aa8.6□□□□□ -1.03
SPIDR-226ENST00000524157 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
SPIDR-226ENST00000524157 LHX6Q9UPM6 363 aa8.6□□□□□ -1.03
SPIDR-226ENST00000524157 CCER1Q8TC90 406 aaPredicted RBP8.59□□□□□ -1.03
SPIDR-226ENST00000524157 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
SPIDR-226ENST00000524157 POTEJP0CG39 1038 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 ERCC3P19447 782 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 GCGRP47871 477 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 ELOAQ14241 798 aaKnown RBP8.58□□□□□ -1.04
SPIDR-226ENST00000524157 CDCA8Q53HL2 280 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 TSC1Q92574 1164 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 TATDN2Q93075 761 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 PNMA3Q9UL41 463 aa8.58□□□□□ -1.04
SPIDR-226ENST00000524157 RBM47A0AV96 593 aaKnown RBP8.57□□□□□ -1.04
SPIDR-226ENST00000524157 ATP9BO43861 1147 aa8.57□□□□□ -1.04
SPIDR-226ENST00000524157 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
SPIDR-226ENST00000524157 EIF4G2P78344 907 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPIDR-226ENST00000524157 LRRN4Q8WUT4 740 aa8.57□□□□□ -1.04
SPIDR-226ENST00000524157 KHSRPQ92945 711 aaKnown RBP eCLIP8.57□□□□□ -1.04
SPIDR-226ENST00000524157 TRIM6-TRIM34B2RNG4 842 aa8.56□□□□□ -1.04
SPIDR-226ENST00000524157 HMGB1P09429 215 aaKnown RBP8.56□□□□□ -1.04
SPIDR-226ENST00000524157 COL9A1P20849 921 aa8.56□□□□□ -1.04
SPIDR-226ENST00000524157 KCNH8Q96L42 1107 aa8.56□□□□□ -1.04
SPIDR-226ENST00000524157 USP35Q9P2H5 1018 aa8.56□□□□□ -1.04
SPIDR-226ENST00000524157 PCDHGC3Q9UN70 934 aa8.56□□□□□ -1.04
SPIDR-226ENST00000524157 TBC1D9Q6ZT07 1266 aa8.55□□□□□ -1.04
SPIDR-226ENST00000524157 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
SPIDR-226ENST00000524157 POTEB2H3BUK9 544 aa8.53□□□□□ -1.04
SPIDR-226ENST00000524157 TXNDC2Q86VQ3 553 aa8.53□□□□□ -1.04
SPIDR-226ENST00000524157 UNCXA6NJT0 531 aa8.52□□□□□ -1.05
SPIDR-226ENST00000524157 CFAP99D6REC4 459 aa8.52□□□□□ -1.05
SPIDR-226ENST00000524157 GUCA2AQ02747 115 aa8.52□□□□□ -1.05
SPIDR-226ENST00000524157 GRIPAP1Q4V328 841 aa8.52□□□□□ -1.05
SPIDR-226ENST00000524157 EPS8L1Q8TE68 723 aa8.52□□□□□ -1.05
SPIDR-226ENST00000524157 C3orf80F5H4A9 247 aa8.51□□□□□ -1.05
SPIDR-226ENST00000524157 C6orf229H3BNL8 230 aa8.51□□□□□ -1.05
SPIDR-226ENST00000524157 KANK4Q5T7N3 995 aaPredicted RBP8.51□□□□□ -1.05
SPIDR-226ENST00000524157 TMEM164Q5U3C3 297 aa8.51□□□□□ -1.05
SPIDR-226ENST00000524157 NFATC2IPQ8NCF5 419 aa8.51□□□□□ -1.05
SPIDR-226ENST00000524157 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
SPIDR-226ENST00000524157 IGSF5Q9NSI5 407 aa8.5□□□□□ -1.05
SPIDR-226ENST00000524157 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
SPIDR-226ENST00000524157 NOVA2Q9UNW9 492 aaKnown RBP8.5□□□□□ -1.05
SPIDR-226ENST00000524157 ARID4AP29374 1257 aaPredicted RBP8.49□□□□□ -1.05
SPIDR-226ENST00000524157 NR6A1Q15406 480 aa8.49□□□□□ -1.05
SPIDR-226ENST00000524157 NR1H3Q13133 447 aa8.48□□□□□ -1.05
SPIDR-226ENST00000524157 STK32AQ8WU08 396 aa8.48□□□□□ -1.05
SPIDR-226ENST00000524157 HLA-CQ95604 372 aa8.48□□□□□ -1.05
SPIDR-226ENST00000524157 SLC4A3P48751 1232 aa8.47□□□□□ -1.05
SPIDR-226ENST00000524157 DNAJC14Q6Y2X3 702 aaPredicted RBP8.47□□□□□ -1.05
SPIDR-226ENST00000524157 MRRFQ96E11 262 aaKnown RBP8.47□□□□□ -1.05
SPIDR-226ENST00000524157 USP17L3A6NCW0 530 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L4A6NCW7 530 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 FAM196BA6NMK8 535 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 SMAPO00193 183 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 HSP90B1P14625 803 aaKnown RBP8.46□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L2Q6R6M4 530 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L1Q7RTZ2 530 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 PLEKHM2Q8IWE5 1019 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 SIRT1Q96EB6 747 aa8.46□□□□□ -1.06
SPIDR-226ENST00000524157 SLC10A3P09131 477 aa8.45□□□□□ -1.06
SPIDR-226ENST00000524157 PHLDB3Q6NSJ2 640 aa8.45□□□□□ -1.06
SPIDR-226ENST00000524157 ZBED2Q9BTP6 218 aa8.45□□□□□ -1.06
SPIDR-226ENST00000524157 RABGEF1Q9UJ41 708 aa8.45□□□□□ -1.06
SPIDR-226ENST00000524157 SSFA2P28290 1259 aa8.44□□□□□ -1.06
SPIDR-226ENST00000524157 PBX2P40425 430 aa8.44□□□□□ -1.06
SPIDR-226ENST00000524157 HDGFP51858 240 aaKnown RBP8.44□□□□□ -1.06
SPIDR-226ENST00000524157 SOWAHDA6NJG2 315 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L15C9J2P7 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L10C9JJH3 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L13C9JLJ4 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L12C9JPN9 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L11C9JVI0 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L21D6R901 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L18D6R9N7 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L22D6RA61 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L17D6RBQ6 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L19D6RCP7 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L20D6RJB6 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 USP17L24Q0WX57 530 aa8.43□□□□□ -1.06
SPIDR-226ENST00000524157 SWT1Q5T5J6 900 aaKnown RBP8.43□□□□□ -1.06
SPIDR-226ENST00000524157 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms