RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 Q3C1V9 767 aa10.59□□□□□ -0.71
NSMCE2-211ENST00000523549 AAASQ9NRG9 546 aa10.59□□□□□ -0.71
NSMCE2-211ENST00000523549 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
NSMCE2-211ENST00000523549 AVPP01185 164 aa10.57□□□□□ -0.72
NSMCE2-211ENST00000523549 USP46P62068 366 aa10.57□□□□□ -0.72
NSMCE2-211ENST00000523549 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
NSMCE2-211ENST00000523549 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
NSMCE2-211ENST00000523549 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
NSMCE2-211ENST00000523549 HLA-CQ95604 372 aa10.55□□□□□ -0.72
NSMCE2-211ENST00000523549 USB1Q9BQ65 265 aaKnown RBP10.55□□□□□ -0.72
NSMCE2-211ENST00000523549 DXOO77932 396 aaKnown RBP10.54□□□□□ -0.72
NSMCE2-211ENST00000523549 ZBTB24O43167 697 aaPredicted RBP10.53□□□□□ -0.72
NSMCE2-211ENST00000523549 HOXA2O43364 376 aa10.53□□□□□ -0.72
NSMCE2-211ENST00000523549 GPCPD1Q9NPB8 672 aa10.53□□□□□ -0.72
NSMCE2-211ENST00000523549 FAM217BQ9NTX9 383 aaPredicted RBP10.53□□□□□ -0.72
NSMCE2-211ENST00000523549 CYP4X1Q8N118 509 aa10.52□□□□□ -0.73
NSMCE2-211ENST00000523549 WNT7AO00755 349 aa10.51□□□□□ -0.73
NSMCE2-211ENST00000523549 CLCN1P35523 988 aa10.51□□□□□ -0.73
NSMCE2-211ENST00000523549 TRIM32Q13049 653 aa10.5□□□□□ -0.73
NSMCE2-211ENST00000523549 REPIN1Q9BWE0 567 aaKnown RBP10.5□□□□□ -0.73
NSMCE2-211ENST00000523549 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
NSMCE2-211ENST00000523549 SMCPP49901 116 aaPredicted RBP10.49□□□□□ -0.73
NSMCE2-211ENST00000523549 GUCA2AQ02747 115 aa10.47□□□□□ -0.73
NSMCE2-211ENST00000523549 CTC1Q2NKJ3 1217 aa10.47□□□□□ -0.73
NSMCE2-211ENST00000523549 SMPD1P17405 629 aa10.46□□□□□ -0.73
NSMCE2-211ENST00000523549 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.73
NSMCE2-211ENST00000523549 SYMPKQ92797 1274 aaKnown RBP10.46□□□□□ -0.73
NSMCE2-211ENST00000523549 TTC24A2A3L6 582 aaPredicted RBP10.45□□□□□ -0.74
NSMCE2-211ENST00000523549 AXIN1O15169 862 aa10.45□□□□□ -0.74
NSMCE2-211ENST00000523549 SKOR1P84550 965 aa10.44□□□□□ -0.74
NSMCE2-211ENST00000523549 BARGINQ6ZT62 677 aa10.44□□□□□ -0.74
NSMCE2-211ENST00000523549 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
NSMCE2-211ENST00000523549 ZMYND10O75800 440 aa10.43□□□□□ -0.74
NSMCE2-211ENST00000523549 JUNDP17535 347 aa10.43□□□□□ -0.74
NSMCE2-211ENST00000523549 LCE2AQ5TA79 106 aaPredicted RBP10.43□□□□□ -0.74
NSMCE2-211ENST00000523549 NUTM1Q86Y26 1132 aa10.43□□□□□ -0.74
NSMCE2-211ENST00000523549 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
NSMCE2-211ENST00000523549 SSTR3P32745 418 aaPredicted RBP10.42□□□□□ -0.74
NSMCE2-211ENST00000523549 RETREG3Q86VR2 466 aa10.42□□□□□ -0.74
NSMCE2-211ENST00000523549 CCDC24Q8N4L8 307 aa10.42□□□□□ -0.74
NSMCE2-211ENST00000523549 J3QL48 77 aa10.41□□□□□ -0.74
NSMCE2-211ENST00000523549 KRI1Q8N9T8 703 aaKnown RBP10.41□□□□□ -0.74
NSMCE2-211ENST00000523549 GMPR2Q9P2T1 348 aaKnown RBP10.41□□□□□ -0.74
NSMCE2-211ENST00000523549 WNT7BP56706 349 aa10.4□□□□□ -0.74
NSMCE2-211ENST00000523549 RC3H1Q5TC82 1133 aaKnown RBP10.4□□□□□ -0.74
NSMCE2-211ENST00000523549 SPIRE2Q8WWL2 714 aa10.4□□□□□ -0.74
NSMCE2-211ENST00000523549 FDX1P10109 184 aa10.39□□□□□ -0.75
NSMCE2-211ENST00000523549 AMHR2Q16671 573 aa10.39□□□□□ -0.75
NSMCE2-211ENST00000523549 PTCRAQ6ISU1 281 aaPredicted RBP10.39□□□□□ -0.75
NSMCE2-211ENST00000523549 TREML4Q6UXN2 200 aa10.38□□□□□ -0.75
NSMCE2-211ENST00000523549 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
NSMCE2-211ENST00000523549 NUDT12Q9BQG2 462 aa10.36□□□□□ -0.75
NSMCE2-211ENST00000523549 SIAH2O43255 324 aa10.35□□□□□ -0.75
NSMCE2-211ENST00000523549 NDUFV2P19404 249 aa10.35□□□□□ -0.75
NSMCE2-211ENST00000523549 HPS1Q92902 700 aa10.35□□□□□ -0.75
NSMCE2-211ENST00000523549 MOXD2PA6NHM9 499 aa10.34□□□□□ -0.75
NSMCE2-211ENST00000523549 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
NSMCE2-211ENST00000523549 ATP13A2Q9NQ11 1180 aa10.34□□□□□ -0.75
NSMCE2-211ENST00000523549 C6orf229H3BNL8 230 aa10.33□□□□□ -0.76
NSMCE2-211ENST00000523549 MS4A1P11836 297 aa10.31□□□□□ -0.76
NSMCE2-211ENST00000523549 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
NSMCE2-211ENST00000523549 GIGYF2Q6Y7W6 1299 aaKnown RBP10.31□□□□□ -0.76
NSMCE2-211ENST00000523549 EVA1BQ9NVM1 165 aa10.31□□□□□ -0.76
NSMCE2-211ENST00000523549 CCNYL3P0C7X3 344 aa10.3□□□□□ -0.76
NSMCE2-211ENST00000523549 PTPRNQ16849 979 aa10.3□□□□□ -0.76
NSMCE2-211ENST00000523549 GJA5P36382 358 aa10.29□□□□□ -0.76
NSMCE2-211ENST00000523549 SH3BP2P78314 561 aa10.29□□□□□ -0.76
NSMCE2-211ENST00000523549 NFX1Q12986 1120 aaKnown RBP10.28□□□□□ -0.76
NSMCE2-211ENST00000523549 DESI1Q6ICB0 168 aa10.28□□□□□ -0.76
NSMCE2-211ENST00000523549 PRR7Q8TB68 274 aa10.28□□□□□ -0.76
NSMCE2-211ENST00000523549 BEGAINQ9BUH8 593 aa10.28□□□□□ -0.76
NSMCE2-211ENST00000523549 SPDYE5A6NIY4 337 aa10.27□□□□□ -0.77
NSMCE2-211ENST00000523549 ALDH1A1P00352 501 aa10.27□□□□□ -0.77
NSMCE2-211ENST00000523549 SNRPBP14678 240 aaKnown RBP10.27□□□□□ -0.77
NSMCE2-211ENST00000523549 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
NSMCE2-211ENST00000523549 TRIM66O15016 1216 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 KCNH2Q12809 1159 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 MTMR2Q13614 643 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 PARP9Q8IXQ6 854 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 EHBP1Q8NDI1 1231 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 TBC1D2Q9BYX2 928 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 UNC93B1Q9H1C4 597 aa10.26□□□□□ -0.77
NSMCE2-211ENST00000523549 WFS1O76024 890 aa10.25□□□□□ -0.77
NSMCE2-211ENST00000523549 SENP2Q9HC62 589 aa10.25□□□□□ -0.77
NSMCE2-211ENST00000523549 RSBN1LQ6PCB5 846 aaPredicted RBP10.24□□□□□ -0.77
NSMCE2-211ENST00000523549 BAP1Q92560 729 aa10.24□□□□□ -0.77
NSMCE2-211ENST00000523549 PCDHB15Q9Y5E8 787 aa10.24□□□□□ -0.77
NSMCE2-211ENST00000523549 SPTLC1O15269 473 aa10.23□□□□□ -0.77
NSMCE2-211ENST00000523549 DIXDC1Q155Q3 683 aa10.23□□□□□ -0.77
NSMCE2-211ENST00000523549 LYPD8Q6UX82 237 aa10.22□□□□□ -0.77
NSMCE2-211ENST00000523549 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
NSMCE2-211ENST00000523549 MPNDQ8N594 471 aa10.21□□□□□ -0.77
NSMCE2-211ENST00000523549 KIFC2Q96AC6 838 aa10.21□□□□□ -0.77
NSMCE2-211ENST00000523549 AK7Q96M32 723 aa10.21□□□□□ -0.77
NSMCE2-211ENST00000523549 ZNF511Q8NB15 262 aa10.2□□□□□ -0.78
NSMCE2-211ENST00000523549 CFAP99D6REC4 459 aa10.19□□□□□ -0.78
NSMCE2-211ENST00000523549 TERTO14746 1132 aaKnown RBP10.19□□□□□ -0.78
NSMCE2-211ENST00000523549 WIPF1O43516 503 aa10.19□□□□□ -0.78
NSMCE2-211ENST00000523549 HRCP23327 699 aa10.19□□□□□ -0.78
NSMCE2-211ENST00000523549 LINC01559Q495D7 138 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms