RNA–Protein interactions for RNA: ENST00000522887.1

EIF3E-216, Transcript of eukaryotic translation initiation factor 3 subunit E, human

TSL 4

Gene EIF3E, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3E-216	ENST00000522887	GRIPAP1	Q4V328	841 aa		10.96	□□□□□ -0.65
EIF3E-216	ENST00000522887	CFH	P08603	1231 aa		10.95	□□□□□ -0.66
EIF3E-216	ENST00000522887	MS4A1	P11836	297 aa		10.95	□□□□□ -0.66
EIF3E-216	ENST00000522887	GJA5	P36382	358 aa		10.95	□□□□□ -0.66
EIF3E-216	ENST00000522887	RSPH6A	Q9H0K4	717 aa		10.95	□□□□□ -0.66
EIF3E-216	ENST00000522887	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.95	□□□□□ -0.66
EIF3E-216	ENST00000522887	ACTN4	O43707	911 aa	Known RBP	10.94	□□□□□ -0.66
EIF3E-216	ENST00000522887	GOPC	Q9HD26	462 aa		10.94	□□□□□ -0.66
EIF3E-216	ENST00000522887	BEGAIN	Q9BUH8	593 aa		10.93	□□□□□ -0.66
EIF3E-216	ENST00000522887	PKDCC	Q504Y2	493 aa		10.92	□□□□□ -0.66
EIF3E-216	ENST00000522887	NUTM1	Q86Y26	1132 aa		10.92	□□□□□ -0.66
EIF3E-216	ENST00000522887	SUPT5H	O00267	1087 aa	Known RBP	10.91	□□□□□ -0.66
EIF3E-216	ENST00000522887	KDM4A	O75164	1064 aa		10.91	□□□□□ -0.66
EIF3E-216	ENST00000522887	ATP6V1A	P38606	617 aa		10.88	□□□□□ -0.67
EIF3E-216	ENST00000522887	TUSC1	Q2TAM9	212 aa		10.88	□□□□□ -0.67
EIF3E-216	ENST00000522887	FANCD2	Q9BXW9	1451 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	MRC2	Q9UBG0	1479 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	CEP164	Q9UPV0	1460 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	APLP1	P51693	650 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	SH3D19	Q5HYK7	790 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	ZNF516	Q92618	1163 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	FAM117A	Q9C073	453 aa		10.87	□□□□□ -0.67
EIF3E-216	ENST00000522887	TOP2A	P11388	1531 aa	Known RBP	10.86	□□□□□ -0.67
EIF3E-216	ENST00000522887	HOXA2	O43364	376 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	NR1I2	O75469	434 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	SPIRE2	Q8WWL2	714 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	TBC1D2	Q9BYX2	928 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	PCDHB3	Q9Y5E6	796 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	KIF21A	Q7Z4S6	1674 aa		10.85	□□□□□ -0.67
EIF3E-216	ENST00000522887	PLEKHG3	A1L390	1219 aa		10.84	□□□□□ -0.67
EIF3E-216	ENST00000522887	TMEM132A	Q24JP5	1023 aa		10.84	□□□□□ -0.67
EIF3E-216	ENST00000522887	SALL2	Q9Y467	1007 aa	Predicted RBP	10.84	□□□□□ -0.67
EIF3E-216	ENST00000522887	DGAT1	O75907	488 aa		10.83	□□□□□ -0.68
EIF3E-216	ENST00000522887	FUT2	Q10981	343 aa		10.83	□□□□□ -0.68
EIF3E-216	ENST00000522887		Q3C1V9	767 aa		10.83	□□□□□ -0.68
EIF3E-216	ENST00000522887	CFTR	P13569	1480 aa		10.82	□□□□□ -0.68
EIF3E-216	ENST00000522887	SKIV2L	Q15477	1246 aa	Known RBP	10.82	□□□□□ -0.68
EIF3E-216	ENST00000522887	MORN1	Q5T089	497 aa		10.82	□□□□□ -0.68
EIF3E-216	ENST00000522887	THOC2	Q8NI27	1593 aa	Known RBP	10.82	□□□□□ -0.68
EIF3E-216	ENST00000522887	CCDC88B	A6NC98	1476 aa		10.81	□□□□□ -0.68
EIF3E-216	ENST00000522887	SPTLC1	O15269	473 aa		10.81	□□□□□ -0.68
EIF3E-216	ENST00000522887	MYSM1	Q5VVJ2	828 aa		10.81	□□□□□ -0.68
EIF3E-216	ENST00000522887	COPS2	P61201	443 aa		10.8	□□□□□ -0.68
EIF3E-216	ENST00000522887	PRPF38B	Q5VTL8	546 aa	Known RBP	10.8	□□□□□ -0.68
EIF3E-216	ENST00000522887	NKX2-3	Q8TAU0	364 aa		10.8	□□□□□ -0.68
EIF3E-216	ENST00000522887	SPDYE5	A6NIY4	337 aa		10.79	□□□□□ -0.68
EIF3E-216	ENST00000522887	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.79	□□□□□ -0.68
EIF3E-216	ENST00000522887	SLC19A1	P41440	591 aa		10.78	□□□□□ -0.68
EIF3E-216	ENST00000522887	CLK2	P49760	499 aa	Known RBP	10.78	□□□□□ -0.68
EIF3E-216	ENST00000522887	MYT1	Q01538	1121 aa		10.78	□□□□□ -0.68
EIF3E-216	ENST00000522887	IL27	Q8NEV9	243 aa		10.78	□□□□□ -0.68
EIF3E-216	ENST00000522887	RIC3	Q7Z5B4	369 aa		10.77	□□□□□ -0.69
EIF3E-216	ENST00000522887	MOXD2P	A6NHM9	499 aa		10.76	□□□□□ -0.69
EIF3E-216	ENST00000522887	FDX1	P10109	184 aa		10.76	□□□□□ -0.69
EIF3E-216	ENST00000522887	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.76	□□□□□ -0.69
EIF3E-216	ENST00000522887	BLOC1S3	Q6QNY0	202 aa		10.75	□□□□□ -0.69
EIF3E-216	ENST00000522887	TREML4	Q6UXN2	200 aa		10.75	□□□□□ -0.69
EIF3E-216	ENST00000522887	WDR62	O43379	1518 aa		10.74	□□□□□ -0.69
EIF3E-216	ENST00000522887	FAM187A	A6NFU0	413 aa		10.74	□□□□□ -0.69
EIF3E-216	ENST00000522887	ZPR1	O75312	459 aa		10.74	□□□□□ -0.69
EIF3E-216	ENST00000522887	FMNL1	O95466	1100 aa	Predicted RBP	10.73	□□□□□ -0.69
EIF3E-216	ENST00000522887	SCUBE3	Q8IX30	993 aa		10.73	□□□□□ -0.69
EIF3E-216	ENST00000522887	SLC27A5	Q9Y2P5	690 aa		10.73	□□□□□ -0.69
EIF3E-216	ENST00000522887	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.72	□□□□□ -0.69
EIF3E-216	ENST00000522887	ZBTB3	Q9H5J0	574 aa		10.72	□□□□□ -0.69
EIF3E-216	ENST00000522887	URB2	Q14146	1524 aa	Known RBP	10.72	□□□□□ -0.69
EIF3E-216	ENST00000522887	PRR20E	P86478	221 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	PRR20C	P86479	221 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	PRR20D	P86480	221 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	PRR20B	P86481	221 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	PRR20A	P86496	221 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	BRICD5	Q6PL45	260 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	ZNF598	Q86UK7	904 aa	Known RBP	10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	RETREG3	Q86VR2	466 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	THAP11	Q96EK4	314 aa		10.71	□□□□□ -0.69
EIF3E-216	ENST00000522887	MTMR2	Q13614	643 aa		10.7	□□□□□ -0.7
EIF3E-216	ENST00000522887	PUS10	Q3MIT2	529 aa	Known RBP	10.7	□□□□□ -0.7
EIF3E-216	ENST00000522887	MSS51	Q4VC12	460 aa		10.7	□□□□□ -0.7
EIF3E-216	ENST00000522887	PPP2R2D	Q66LE6	453 aa		10.7	□□□□□ -0.7
EIF3E-216	ENST00000522887	TRIM67	Q6ZTA4	783 aa		10.7	□□□□□ -0.7
EIF3E-216	ENST00000522887	POTEC	B2RU33	542 aa		10.69	□□□□□ -0.7
EIF3E-216	ENST00000522887	ADH1B	P00325	375 aa		10.69	□□□□□ -0.7
EIF3E-216	ENST00000522887	NDUFV2	P19404	249 aa		10.69	□□□□□ -0.7
EIF3E-216	ENST00000522887	SPRYD7	Q5W111	196 aa		10.69	□□□□□ -0.7
EIF3E-216	ENST00000522887	LIMD1	Q9UGP4	676 aa		10.69	□□□□□ -0.7
EIF3E-216	ENST00000522887	LILRB3	O75022	631 aa		10.68	□□□□□ -0.7
EIF3E-216	ENST00000522887	DESI1	Q6ICB0	168 aa		10.68	□□□□□ -0.7
EIF3E-216	ENST00000522887	PCDHGC3	Q9UN70	934 aa		10.68	□□□□□ -0.7
EIF3E-216	ENST00000522887	RNF223	E7ERA6	249 aa		10.67	□□□□□ -0.7
EIF3E-216	ENST00000522887	USB1	Q9BQ65	265 aa	Known RBP	10.67	□□□□□ -0.7
EIF3E-216	ENST00000522887	ZNF697	Q5TEC3	545 aa		10.66	□□□□□ -0.7
EIF3E-216	ENST00000522887	SPSB2	Q99619	263 aa		10.66	□□□□□ -0.7
EIF3E-216	ENST00000522887	POLR3E	Q9NVU0	708 aa		10.66	□□□□□ -0.7
EIF3E-216	ENST00000522887	STK17A	Q9UEE5	414 aa		10.66	□□□□□ -0.7
EIF3E-216	ENST00000522887	C6orf229	H3BNL8	230 aa		10.65	□□□□□ -0.7
EIF3E-216	ENST00000522887	IFT140	Q96RY7	1462 aa		10.64	□□□□□ -0.71
EIF3E-216	ENST00000522887	HRC	P23327	699 aa		10.64	□□□□□ -0.71
EIF3E-216	ENST00000522887	ANKLE1	Q8NAG6	615 aa		10.64	□□□□□ -0.71
EIF3E-216	ENST00000522887	ABCC8	Q09428	1581 aa		10.64	□□□□□ -0.71
EIF3E-216	ENST00000522887	TOPBP1	Q92547	1522 aa		10.63	□□□□□ -0.71

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