RNA–Protein interactions for RNA: ENST00000522875.5

PVT1-214, Transcript of Pvt1 oncogene, humanhuman

TSL 5 BASIC

Gene PVT1, Length 922 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-214ENST00000522875 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
PVT1-214ENST00000522875 PCDHGC3Q9UN70 934 aa11.68□□□□□ -0.54
PVT1-214ENST00000522875 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
PVT1-214ENST00000522875 ACTN4O43707 911 aaKnown RBP11.67□□□□□ -0.54
PVT1-214ENST00000522875 FDX1P10109 184 aa11.67□□□□□ -0.54
PVT1-214ENST00000522875 GJA5P36382 358 aa11.67□□□□□ -0.54
PVT1-214ENST00000522875 ATP6V1AP38606 617 aa11.67□□□□□ -0.54
PVT1-214ENST00000522875 TUSC1Q2TAM9 212 aa11.66□□□□□ -0.54
PVT1-214ENST00000522875 HMGXB3Q12766 1538 aa11.65□□□□□ -0.54
PVT1-214ENST00000522875 GRIPAP1Q4V328 841 aa11.65□□□□□ -0.54
PVT1-214ENST00000522875 LILRB3O75022 631 aa11.64□□□□□ -0.55
PVT1-214ENST00000522875 CABLES1Q8TDN4 633 aa11.64□□□□□ -0.55
PVT1-214ENST00000522875 RFC5P40937 340 aa11.63□□□□□ -0.55
PVT1-214ENST00000522875 MORN1Q5T089 497 aa11.63□□□□□ -0.55
PVT1-214ENST00000522875 HRCP23327 699 aa11.62□□□□□ -0.55
PVT1-214ENST00000522875 RTL5Q5HYW3 569 aaPredicted RBP11.62□□□□□ -0.55
PVT1-214ENST00000522875 PPP2R2DQ66LE6 453 aa11.62□□□□□ -0.55
PVT1-214ENST00000522875 PRR14Q9BWN1 585 aa11.62□□□□□ -0.55
PVT1-214ENST00000522875 PTPN5P54829 565 aa11.61□□□□□ -0.55
PVT1-214ENST00000522875 SYMPKQ92797 1274 aaKnown RBP11.61□□□□□ -0.55
PVT1-214ENST00000522875 MYT1LQ9UL68 1186 aa11.61□□□□□ -0.55
PVT1-214ENST00000522875 SLC27A5Q9Y2P5 690 aa11.61□□□□□ -0.55
PVT1-214ENST00000522875 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
PVT1-214ENST00000522875 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
PVT1-214ENST00000522875 NUTM2DQ5VT03 806 aaPredicted RBP11.6□□□□□ -0.55
PVT1-214ENST00000522875 PRPF38BQ5VTL8 546 aaKnown RBP11.6□□□□□ -0.55
PVT1-214ENST00000522875 C14orf37Q86TY3 774 aa11.6□□□□□ -0.55
PVT1-214ENST00000522875 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
PVT1-214ENST00000522875 ZBTB3Q9H5J0 574 aa11.59□□□□□ -0.55
PVT1-214ENST00000522875 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
PVT1-214ENST00000522875 MTMR2Q13614 643 aa11.58□□□□□ -0.56
PVT1-214ENST00000522875 C6orf229H3BNL8 230 aa11.57□□□□□ -0.56
PVT1-214ENST00000522875 BLOC1S3Q6QNY0 202 aa11.57□□□□□ -0.56
PVT1-214ENST00000522875 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
PVT1-214ENST00000522875 PCDH10Q9P2E7 1040 aa11.56□□□□□ -0.56
PVT1-214ENST00000522875 CCDC88BA6NC98 1476 aa11.56□□□□□ -0.56
PVT1-214ENST00000522875 RNF19BQ6ZMZ0 732 aa11.55□□□□□ -0.56
PVT1-214ENST00000522875 SPNS2Q8IVW8 549 aa11.55□□□□□ -0.56
PVT1-214ENST00000522875 COPS2P61201 443 aa11.54□□□□□ -0.56
PVT1-214ENST00000522875 CFAP99D6REC4 459 aa11.53□□□□□ -0.56
PVT1-214ENST00000522875 FLIIQ13045 1269 aa11.53□□□□□ -0.56
PVT1-214ENST00000522875 AP1G2O75843 785 aa11.52□□□□□ -0.57
PVT1-214ENST00000522875 MCM6Q14566 821 aa11.52□□□□□ -0.57
PVT1-214ENST00000522875 TMEM259Q4ZIN3 620 aa11.52□□□□□ -0.57
PVT1-214ENST00000522875 SNRKQ9NRH2 765 aa11.52□□□□□ -0.57
PVT1-214ENST00000522875 NR1I2O75469 434 aa11.51□□□□□ -0.57
PVT1-214ENST00000522875 Q3C1V9 767 aa11.51□□□□□ -0.57
PVT1-214ENST00000522875 NYAP1Q6ZVC0 841 aa11.51□□□□□ -0.57
PVT1-214ENST00000522875 TSC1Q92574 1164 aa11.51□□□□□ -0.57
PVT1-214ENST00000522875 SPDYE5A6NIY4 337 aa11.5□□□□□ -0.57
PVT1-214ENST00000522875 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
PVT1-214ENST00000522875 ERICH6Q7L0X2 663 aa11.5□□□□□ -0.57
PVT1-214ENST00000522875 PRR7Q8TB68 274 aa11.5□□□□□ -0.57
PVT1-214ENST00000522875 THAP11Q96EK4 314 aa11.5□□□□□ -0.57
PVT1-214ENST00000522875 CTDSPL2Q05D32 466 aa11.49□□□□□ -0.57
PVT1-214ENST00000522875 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
PVT1-214ENST00000522875 BANK1Q8NDB2 785 aa11.49□□□□□ -0.57
PVT1-214ENST00000522875 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
PVT1-214ENST00000522875 MTRQ99707 1265 aa11.49□□□□□ -0.57
PVT1-214ENST00000522875 FMNL1O95466 1100 aaPredicted RBP11.48□□□□□ -0.57
PVT1-214ENST00000522875 SALL2Q9Y467 1007 aaPredicted RBP11.48□□□□□ -0.57
PVT1-214ENST00000522875 USP17L8P0C7I0 530 aa11.47□□□□□ -0.57
PVT1-214ENST00000522875 USB1Q9BQ65 265 aaKnown RBP11.47□□□□□ -0.57
PVT1-214ENST00000522875 TJAP1Q5JTD0 557 aa11.46□□□□□ -0.57
PVT1-214ENST00000522875 TLL1O43897 1013 aa11.45□□□□□ -0.58
PVT1-214ENST00000522875 ZPR1O75312 459 aa11.45□□□□□ -0.58
PVT1-214ENST00000522875 MTMR14Q8NCE2 650 aa11.45□□□□□ -0.58
PVT1-214ENST00000522875 ZNF516Q92618 1163 aa11.45□□□□□ -0.58
PVT1-214ENST00000522875 HELBQ8NG08 1087 aaPredicted RBP11.44□□□□□ -0.58
PVT1-214ENST00000522875 CLUAP1Q96AJ1 413 aa11.44□□□□□ -0.58
PVT1-214ENST00000522875 SPSB2Q99619 263 aa11.44□□□□□ -0.58
PVT1-214ENST00000522875 PER1O15534 1290 aaPredicted RBP11.43□□□□□ -0.58
PVT1-214ENST00000522875 FAM160A2Q8N612 972 aaPredicted RBP11.43□□□□□ -0.58
PVT1-214ENST00000522875 LRRN4Q8WUT4 740 aa11.43□□□□□ -0.58
PVT1-214ENST00000522875 ZMYND15Q9H091 742 aa11.43□□□□□ -0.58
PVT1-214ENST00000522875 CADPSQ9ULU8 1353 aa11.42□□□□□ -0.58
PVT1-214ENST00000522875 UBTFP17480 764 aaKnown RBP11.42□□□□□ -0.58
PVT1-214ENST00000522875 POM121Q96HA1 1249 aa11.42□□□□□ -0.58
PVT1-214ENST00000522875 HMX1Q9NP08 348 aaPredicted RBP11.42□□□□□ -0.58
PVT1-214ENST00000522875 HCSTQ9UBK5 93 aa11.42□□□□□ -0.58
PVT1-214ENST00000522875 IL21Q9HBE4 155 aa11.41□□□□□ -0.58
PVT1-214ENST00000522875 NESP48681 1621 aa11.4□□□□□ -0.58
PVT1-214ENST00000522875 DESI1Q6ICB0 168 aa11.4□□□□□ -0.58
PVT1-214ENST00000522875 PRDM9Q9NQV7 894 aa11.4□□□□□ -0.58
PVT1-214ENST00000522875 NKX2-3Q8TAU0 364 aa11.39□□□□□ -0.59
PVT1-214ENST00000522875 MMRN1Q13201 1228 aa11.38□□□□□ -0.59
PVT1-214ENST00000522875 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
PVT1-214ENST00000522875 CFTRP13569 1480 aa11.38□□□□□ -0.59
PVT1-214ENST00000522875 ADH1BP00325 375 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 JUNDP17535 347 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 LYPD8Q6UX82 237 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 EPS8L1Q8TE68 723 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 COG6Q9Y2V7 657 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 LAMC3Q9Y6N6 1575 aa11.37□□□□□ -0.59
PVT1-214ENST00000522875 TRIM34Q9BYJ4 488 aa11.35□□□□□ -0.59
PVT1-214ENST00000522875 GDPD2Q9HCC8 539 aa11.35□□□□□ -0.59
PVT1-214ENST00000522875 SOCS7O14512 581 aa11.34□□□□□ -0.59
PVT1-214ENST00000522875 TBC1D2BQ9UPU7 963 aa11.34□□□□□ -0.59
PVT1-214ENST00000522875 DXOO77932 396 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms