RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 PRIMPOLQ96LW4 560 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 ZKSCAN5Q9Y2L8 839 aa5.72□□□□□ -1.49
PCM1-215ENST00000522275 TSHZ1Q6ZSZ6 1077 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 ANKRD23Q86SG2 305 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 BCL2L12Q9HB09 334 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 KDM4AO75164 1064 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 POLD1P28340 1107 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 MCM5P33992 734 aa5.71□□□□□ -1.5
PCM1-215ENST00000522275 HNRNPH2P55795 449 aaKnown RBP5.71□□□□□ -1.5
PCM1-215ENST00000522275 KLHL33A6NCF5 533 aa5.7□□□□□ -1.5
PCM1-215ENST00000522275 SRPK2P78362 688 aaKnown RBP5.7□□□□□ -1.5
PCM1-215ENST00000522275 FOXD4L6Q3SYB3 417 aaPredicted RBP5.7□□□□□ -1.5
PCM1-215ENST00000522275 FOXD4L3Q6VB84 417 aaPredicted RBP5.7□□□□□ -1.5
PCM1-215ENST00000522275 ZNF428Q96B54 188 aa5.7□□□□□ -1.5
PCM1-215ENST00000522275 RPS6KL1Q9Y6S9 549 aa5.7□□□□□ -1.5
PCM1-215ENST00000522275 RBM5P52756 815 aaKnown RBP eCLIP5.7□□□□□ -1.5
PCM1-215ENST00000522275 CCT2P78371 535 aaKnown RBP5.7□□□□□ -1.5
PCM1-215ENST00000522275 DRC1Q96MC2 740 aa5.7□□□□□ -1.5
PCM1-215ENST00000522275 SART3Q15020 963 aaKnown RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 HSP90AB4PQ58FF6 505 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 JRKLQ9Y4A0 524 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 DDX11L8A8MPP1 907 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 CALRP27797 417 aaKnown RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 CASQ1P31415 396 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 RBM25P49756 843 aaKnown RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 GSCP56915 257 aaPredicted RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 PPP2R5AQ15172 486 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 SWT1Q5T5J6 900 aaKnown RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 C1QTNF12Q5T7M4 302 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 JMYQ8N9B5 988 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 ANKRD7Q92527 254 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 PAIP2Q9BPZ3 127 aaKnown RBP5.69□□□□□ -1.5
PCM1-215ENST00000522275 NBPF3Q9H094 633 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 MRS2Q9HD23 443 aa5.69□□□□□ -1.5
PCM1-215ENST00000522275 RAD50Q92878 1312 aa5.68□□□□□ -1.5
PCM1-215ENST00000522275 ZBTB7CA1YPR0 619 aa5.68□□□□□ -1.5
PCM1-215ENST00000522275 RRP1P56182 461 aaKnown RBP5.68□□□□□ -1.5
PCM1-215ENST00000522275 C11orf91Q3C1V1 193 aa5.68□□□□□ -1.5
PCM1-215ENST00000522275 COQ9O75208 318 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 CCDC91Q7Z6B0 441 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 RPAINQ86UA6 219 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 C10orf67Q8IYJ2 551 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 FAM177A1Q8N128 213 aaPredicted RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 NECTIN2Q92692 538 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 ARHGEF1Q92888 912 aaKnown RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 FAM210AQ96ND0 272 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 H0YHG0 523 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 KIF3CO14782 793 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 IPO7O95373 1038 aaKnown RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 SARNPP82979 210 aaKnown RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 PDLIM2Q96JY6 352 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 DDX41Q9UJV9 622 aaKnown RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 MORC2Q9Y6X9 1032 aaPredicted RBP5.67□□□□□ -1.5
PCM1-215ENST00000522275 USP19O94966 1318 aa5.67□□□□□ -1.5
PCM1-215ENST00000522275 GOLGA6L6A8MZA4 724 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 TRIM66O15016 1216 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 LIG1P18858 919 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 INHBEP58166 350 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 MAP9Q49MG5 647 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 TSPAN18Q96SJ8 248 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 CTNNA3Q9UI47 895 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 KNSTRNQ9Y448 316 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 MYO1CO00159 1063 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 CTAGE5O15320 804 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 ATP2B1P20020 1258 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.66□□□□□ -1.52e-7■■■□□ 17.1
PCM1-215ENST00000522275 FAM184AQ8NB25 1140 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 SPRYD3Q8NCJ5 442 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 DEF6Q9H4E7 631 aa5.66□□□□□ -1.5
PCM1-215ENST00000522275 KTN1Q86UP2 1357 aaKnown RBP5.66□□□□□ -1.5
PCM1-215ENST00000522275 SMARCA2P51531 1590 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 CAND2O75155 1236 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 TPM3P06753 285 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 HSP90AB1P08238 724 aaKnown RBP5.65□□□□□ -1.5
PCM1-215ENST00000522275 PAX7P23759 505 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 CYP2C19P33261 490 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 ATP6V1AP38606 617 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 KIAA2012Q0VF49 1180 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 HDAC1Q13547 482 aaPredicted RBP5.65□□□□□ -1.5
PCM1-215ENST00000522275 SF3A1Q15459 793 aaKnown RBP5.65□□□□□ -1.5
PCM1-215ENST00000522275 E2F4Q16254 413 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 TSGA10IPQ3SY00 556 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 NUTM2GQ5VZR2 741 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 SP7Q8TDD2 431 aaPredicted RBP5.65□□□□□ -1.5
PCM1-215ENST00000522275 NUCKS1Q9H1E3 243 aaKnown RBP5.65□□□□□ -1.5
PCM1-215ENST00000522275 CHMP5Q9NZZ3 219 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 POLKQ9UBT6 870 aa5.65□□□□□ -1.5
PCM1-215ENST00000522275 SCP2P22307 547 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 TRDNQ13061 729 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 NOLC1Q14978 699 aaKnown RBP eCLIP5.65□□□□□ -1.51
PCM1-215ENST00000522275 MORC1Q86VD1 984 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 NFATC2IPQ8NCF5 419 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 TBC1D2Q9BYX2 928 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 KDM4CQ9H3R0 1056 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 ZNF446Q9NWS9 450 aa5.65□□□□□ -1.51
PCM1-215ENST00000522275 ZNF219Q9P2Y4 722 aaPredicted RBP5.65□□□□□ -1.51
PCM1-215ENST00000522275 SKOR2Q2VWA4 1001 aaPredicted RBP5.64□□□□□ -1.51
PCM1-215ENST00000522275 CREBRFQ8IUR6 639 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 KRT222Q8N1A0 295 aa5.64□□□□□ -1.51
PCM1-215ENST00000522275 GOLGA6L1Q8N7Z2 621 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms