RNA–Protein interactions for RNA: ENST00000522111.2

TRNP1-201, Transcript of TMF1-regulated nuclear protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRNP1, Length 1,958 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1-201ENST00000522111 TBX22Q9Y458 520 aa37.3■■■■□ 3.56
TRNP1-201ENST00000522111 PTPRUQ92729 1446 aa37.3■■■■□ 3.56
TRNP1-201ENST00000522111 SRPK2P78362 688 aaKnown RBP37.28■■■■□ 3.56
TRNP1-201ENST00000522111 TMC1Q8TDI8 760 aa37.28■■■■□ 3.56
TRNP1-201ENST00000522111 ROBO2Q9HCK4 1378 aa37.28■■■■□ 3.56
TRNP1-201ENST00000522111 FAM135BQ49AJ0 1406 aa37.24■■■■□ 3.55
TRNP1-201ENST00000522111 AMOTL2Q9Y2J4 779 aa37.22■■■■□ 3.55
TRNP1-201ENST00000522111 SLC12A5Q9H2X9 1139 aa37.22■■■■□ 3.55
TRNP1-201ENST00000522111 CC2D1BQ5T0F9 858 aaKnown RBP37.2■■■■□ 3.55
TRNP1-201ENST00000522111 CDK19Q9BWU1 502 aa37.2■■■■□ 3.55
TRNP1-201ENST00000522111 KNSTRNQ9Y448 316 aa37.2■■■■□ 3.55
TRNP1-201ENST00000522111 SIRT1Q96EB6 747 aa37.18■■■■□ 3.54
TRNP1-201ENST00000522111 KTN1Q86UP2 1357 aaKnown RBP37.18■■■■□ 3.54
TRNP1-201ENST00000522111 CCDC184Q52MB2 194 aa37.18■■■■□ 3.54
TRNP1-201ENST00000522111 NCKAP5LQ9HCH0 1330 aa37.17■■■■□ 3.54
TRNP1-201ENST00000522111 PUS7Q96PZ0 661 aaKnown RBP37.17■■■■□ 3.54
TRNP1-201ENST00000522111 NPHP4O75161 1426 aaPredicted RBP37.15■■■■□ 3.54
TRNP1-201ENST00000522111 XRN1Q8IZH2 1706 aaKnown RBP37.13■■■■□ 3.53
TRNP1-201ENST00000522111 CARD14Q9BXL6 1004 aa37.13■■■■□ 3.53
TRNP1-201ENST00000522111 ATAD2Q6PL18 1390 aa37.11■■■■□ 3.53
TRNP1-201ENST00000522111 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.11■■■■□ 3.53
TRNP1-201ENST00000522111 PTCH1Q13635 1447 aa37.09■■■■□ 3.53
TRNP1-201ENST00000522111 RALBP1Q15311 655 aa37.09■■■■□ 3.53
TRNP1-201ENST00000522111 MRS2Q9HD23 443 aa37.09■■■■□ 3.53
TRNP1-201ENST00000522111 PARD3Q8TEW0 1356 aa37.09■■■■□ 3.53
TRNP1-201ENST00000522111 KCNA6P17658 529 aa37.09■■■■□ 3.53
TRNP1-201ENST00000522111 PIK3R4Q99570 1358 aa37.08■■■■□ 3.53
TRNP1-201ENST00000522111 WASLO00401 505 aaPredicted RBP37.08■■■■□ 3.53
TRNP1-201ENST00000522111 AMER1Q5JTC6 1135 aaPredicted RBP37.08■■■■□ 3.53
TRNP1-201ENST00000522111 HSPA2P54652 639 aa37.08■■■■□ 3.53
TRNP1-201ENST00000522111 CHD2O14647 1828 aaKnown RBP37.05■■■■□ 3.52
TRNP1-201ENST00000522111 NSD3Q9BZ95 1437 aa37.05■■■■□ 3.52
TRNP1-201ENST00000522111 MYBBP1AQ9BQG0 1328 aaKnown RBP37.04■■■■□ 3.52
TRNP1-201ENST00000522111 ANKRD36BQ8N2N9 1353 aa37.03■■■■□ 3.52
TRNP1-201ENST00000522111 NINLQ9Y2I6 1382 aa37.02■■■■□ 3.52
TRNP1-201ENST00000522111 ADGRB2O60241 1585 aa37.01■■■■□ 3.52
TRNP1-201ENST00000522111 CABP1Q9NZU7 370 aa37■■■■□ 3.51
TRNP1-201ENST00000522111 A0A1W2PP64 1363 aa36.99■■■■□ 3.51
TRNP1-201ENST00000522111 LMTK3Q96Q04 1460 aa36.98■■■■□ 3.51
TRNP1-201ENST00000522111 CD163L1Q9NR16 1453 aa36.95■■■■□ 3.51
TRNP1-201ENST00000522111 NUTM2FA1L443 756 aa36.94■■■■□ 3.5
TRNP1-201ENST00000522111 NUDT16Q96DE0 195 aaKnown RBP36.94■■■■□ 3.5
TRNP1-201ENST00000522111 NPC1L1Q9UHC9 1359 aa36.93■■■■□ 3.5
TRNP1-201ENST00000522111 TERF2IPQ9NYB0 399 aa36.93■■■■□ 3.5
TRNP1-201ENST00000522111 PPIP5K1Q6PFW1 1433 aa36.92■■■■□ 3.5
TRNP1-201ENST00000522111 FAM9BQ8IZU0 186 aa36.92■■■■□ 3.5
TRNP1-201ENST00000522111 RBM33Q96EV2 1170 aaKnown RBP36.91■■■■□ 3.5
TRNP1-201ENST00000522111 ATP7BP35670 1465 aa36.91■■■■□ 3.5
TRNP1-201ENST00000522111 PRR36Q9H6K5 1346 aa36.9■■■■□ 3.5
TRNP1-201ENST00000522111 CENPBP07199 599 aaPredicted RBP36.89■■■■□ 3.5
TRNP1-201ENST00000522111 NLRP13Q86W25 1043 aa36.89■■■■□ 3.5
TRNP1-201ENST00000522111 USP32Q8NFA0 1604 aa36.89■■■■□ 3.5
TRNP1-201ENST00000522111 BRD4O60885 1362 aaPredicted RBP36.87■■■■□ 3.49
TRNP1-201ENST00000522111 HDGFL2Q7Z4V5 671 aaPredicted RBP36.87■■■■□ 3.49
TRNP1-201ENST00000522111 CGNL1Q0VF96 1302 aa36.87■■■■□ 3.49
TRNP1-201ENST00000522111 CCDC61Q9Y6R9 512 aa36.86■■■■□ 3.49
TRNP1-201ENST00000522111 NALCNQ8IZF0 1738 aa36.83■■■■□ 3.49
TRNP1-201ENST00000522111 PPP2R1AP30153 589 aa36.82■■■■□ 3.48
TRNP1-201ENST00000522111 NWD1Q149M9 1564 aa36.81■■■■□ 3.48
TRNP1-201ENST00000522111 TOPAZ1Q8N9V7 1692 aa36.8■■■■□ 3.48
TRNP1-201ENST00000522111 CDC42BPGQ6DT37 1551 aa36.79■■■■□ 3.48
TRNP1-201ENST00000522111 STRCQ7RTU9 1775 aa36.77■■■■□ 3.48
TRNP1-201ENST00000522111 MORC1Q86VD1 984 aa36.77■■■■□ 3.48
TRNP1-201ENST00000522111 TNNT2P45379 298 aaPredicted RBP36.77■■■■□ 3.48
TRNP1-201ENST00000522111 RGPD8O14715 1765 aaPredicted RBP36.76■■■■□ 3.48
TRNP1-201ENST00000522111 ITSN1Q15811 1721 aa36.76■■■■□ 3.48
TRNP1-201ENST00000522111 CPSF1Q10570 1443 aaKnown RBP36.75■■■■□ 3.47
TRNP1-201ENST00000522111 PNISRQ8TF01 805 aaKnown RBP36.75■■■■□ 3.47
TRNP1-201ENST00000522111 C14orf37Q86TY3 774 aa36.73■■■■□ 3.47
TRNP1-201ENST00000522111 SUGP2Q8IX01 1082 aaKnown RBP eCLIP36.73■■■■□ 3.47
TRNP1-201ENST00000522111 GGNBP2Q9H3C7 697 aa36.73■■■■□ 3.47
TRNP1-201ENST00000522111 FMN2Q9NZ56 1722 aa36.72■■■■□ 3.47
TRNP1-201ENST00000522111 NSD2O96028 1365 aa36.72■■■■□ 3.47
TRNP1-201ENST00000522111 NKTRP30414 1462 aaKnown RBP36.72■■■■□ 3.47
TRNP1-201ENST00000522111 HNRNPUQ00839 825 aaKnown RBP eCLIP36.71■■■■□ 3.47
TRNP1-201ENST00000522111 AKAP12Q02952 1782 aa36.71■■■■□ 3.47
TRNP1-201ENST00000522111 ADGRL3Q9HAR2 1447 aa36.7■■■■□ 3.47
TRNP1-201ENST00000522111 KIF20BQ96Q89 1820 aa36.7■■■■□ 3.47
TRNP1-201ENST00000522111 PROSER2Q86WR7 435 aaPredicted RBP36.69■■■■□ 3.46
TRNP1-201ENST00000522111 MON2Q7Z3U7 1717 aa36.69■■■■□ 3.46
TRNP1-201ENST00000522111 STRCP1A6NGW2 1772 aa36.69■■■■□ 3.46
TRNP1-201ENST00000522111 FYB1O15117 783 aa36.69■■■■□ 3.46
TRNP1-201ENST00000522111 ACEP12821 1306 aa36.67■■■■□ 3.46
TRNP1-201ENST00000522111 PMFBP1Q8TBY8 1022 aa36.67■■■■□ 3.46
TRNP1-201ENST00000522111 EDC4Q6P2E9 1401 aaKnown RBP36.66■■■■□ 3.46
TRNP1-201ENST00000522111 ANKRD26Q9UPS8 1709 aa36.65■■■■□ 3.46
TRNP1-201ENST00000522111 PLEKHG3A1L390 1219 aa36.64■■■■□ 3.46
TRNP1-201ENST00000522111 ANKARQ7Z5J8 1434 aa36.63■■■■□ 3.45
TRNP1-201ENST00000522111 ZNF692Q9BU19 519 aaPredicted RBP36.61■■■■□ 3.45
TRNP1-201ENST00000522111 NME9Q86XW9 330 aa36.58■■■■□ 3.45
TRNP1-201ENST00000522111 NGDNQ8NEJ9 315 aaKnown RBP36.57■■■■□ 3.45
TRNP1-201ENST00000522111 NRKQ7Z2Y5 1582 aa36.56■■■■□ 3.44
TRNP1-201ENST00000522111 USP6P35125 1406 aa36.55■■■■□ 3.44
TRNP1-201ENST00000522111 SENP3-EIF4A1A0A087X0R7 540 aa36.55■■■■□ 3.44
TRNP1-201ENST00000522111 TMEM94Q12767 1356 aa36.55■■■■□ 3.44
TRNP1-201ENST00000522111 ZRANB1Q9UGI0 708 aa36.53■■■■□ 3.44
TRNP1-201ENST00000522111 POLR3AO14802 1390 aaPredicted RBP36.52■■■■□ 3.44
TRNP1-201ENST00000522111 MTHFSP49914 203 aa36.51■■■■□ 3.43
TRNP1-201ENST00000522111 TTC21BQ7Z4L5 1316 aa36.5■■■■□ 3.43
TRNP1-201ENST00000522111 WDR43Q15061 677 aaKnown RBP eCLIP36.47■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms