RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
USP42-207ENST00000521713 NECTIN2Q92692 538 aa19.89■□□□□ 0.77
USP42-207ENST00000521713 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
USP42-207ENST00000521713 SLC12A5Q9H2X9 1139 aa19.88■□□□□ 0.77
USP42-207ENST00000521713 PPP6R1Q9UPN7 881 aa19.88■□□□□ 0.77
USP42-207ENST00000521713 ST18O60284 1047 aa19.87■□□□□ 0.77
USP42-207ENST00000521713 KIF14Q15058 1648 aa19.87■□□□□ 0.77
USP42-207ENST00000521713 PDE4AP27815 886 aa19.86■□□□□ 0.77
USP42-207ENST00000521713 HSP90AB4PQ58FF6 505 aa19.86■□□□□ 0.77
USP42-207ENST00000521713 PLIN1O60240 522 aa19.86■□□□□ 0.77
USP42-207ENST00000521713 RILPL2Q969X0 211 aa19.86■□□□□ 0.77
USP42-207ENST00000521713 FAM161AQ3B820 660 aa19.86■□□□□ 0.77
USP42-207ENST00000521713 TATP17735 454 aaPredicted RBP19.85■□□□□ 0.77
USP42-207ENST00000521713 NOL10Q9BSC4 688 aaKnown RBP19.85■□□□□ 0.77
USP42-207ENST00000521713 G3BP1Q13283 466 aaKnown RBP eCLIP19.85■□□□□ 0.77
USP42-207ENST00000521713 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
USP42-207ENST00000521713 NBPF8Q3BBV2 869 aa19.85■□□□□ 0.77
USP42-207ENST00000521713 RUFY2Q8WXA3 655 aa19.85■□□□□ 0.77
USP42-207ENST00000521713 CAMSAP2Q08AD1 1489 aa19.84■□□□□ 0.77
USP42-207ENST00000521713 NAIPQ13075 1403 aa19.84■□□□□ 0.77
USP42-207ENST00000521713 AAMPQ13685 434 aa19.84■□□□□ 0.77
USP42-207ENST00000521713 RIC3Q7Z5B4 369 aa19.84■□□□□ 0.77
USP42-207ENST00000521713 IFIT2P09913 472 aaKnown RBP19.84■□□□□ 0.77
USP42-207ENST00000521713 CRBNQ96SW2 442 aa19.84■□□□□ 0.77
USP42-207ENST00000521713 DENND4BO75064 1496 aaPredicted RBP19.84■□□□□ 0.77
USP42-207ENST00000521713 AMER1Q5JTC6 1135 aaPredicted RBP19.83■□□□□ 0.77
USP42-207ENST00000521713 DIAPH3Q9NSV4 1193 aa19.83■□□□□ 0.77
USP42-207ENST00000521713 TCP11L2Q8N4U5 519 aa19.83■□□□□ 0.77
USP42-207ENST00000521713 MAP3K1Q13233 1512 aa19.83■□□□□ 0.77
USP42-207ENST00000521713 PCF11O94913 1555 aaKnown RBP19.83■□□□□ 0.76
USP42-207ENST00000521713 TPM4P67936 248 aa19.83■□□□□ 0.76
USP42-207ENST00000521713 PRKAR2BP31323 418 aa19.82■□□□□ 0.76
USP42-207ENST00000521713 ADAMTS8Q9UP79 889 aa19.82■□□□□ 0.76
USP42-207ENST00000521713 AMOTL1Q8IY63 956 aa19.82■□□□□ 0.76
USP42-207ENST00000521713 CCDC61Q9Y6R9 512 aa19.82■□□□□ 0.76
USP42-207ENST00000521713 EXOC6Q8TAG9 804 aa19.81■□□□□ 0.76
USP42-207ENST00000521713 CLSTN1O94985 981 aa19.81■□□□□ 0.76
USP42-207ENST00000521713 VPS37DQ86XT2 251 aa19.81■□□□□ 0.76
USP42-207ENST00000521713 STRN4Q9NRL3 753 aa19.81■□□□□ 0.76
USP42-207ENST00000521713 AKNAQ7Z591 1439 aa19.8■□□□□ 0.76
USP42-207ENST00000521713 GOLGA6L1Q8N7Z2 621 aa19.8■□□□□ 0.76
USP42-207ENST00000521713 ABCC5O15440 1437 aa19.79■□□□□ 0.76
USP42-207ENST00000521713 CCDC30Q5VVM6 783 aa19.79■□□□□ 0.76
USP42-207ENST00000521713 ARID3AQ99856 593 aa19.78■□□□□ 0.76
USP42-207ENST00000521713 PRDM11Q9NQV5 511 aa19.78■□□□□ 0.76
USP42-207ENST00000521713 TOM1L2Q6ZVM7 507 aa19.77■□□□□ 0.76
USP42-207ENST00000521713 PNISRQ8TF01 805 aaKnown RBP19.77■□□□□ 0.76
USP42-207ENST00000521713 FANCAO15360 1455 aa19.77■□□□□ 0.76
USP42-207ENST00000521713 REC8O95072 547 aa19.77■□□□□ 0.76
USP42-207ENST00000521713 AIMP1Q12904 312 aaKnown RBP19.77■□□□□ 0.76
USP42-207ENST00000521713 CPLX2Q6PUV4 134 aaKnown RBP19.76■□□□□ 0.75
USP42-207ENST00000521713 SULT6B1Q6IMI4 303 aa19.76■□□□□ 0.75
USP42-207ENST00000521713 BIVM-ERCC5R4GMW8 1640 aa19.75■□□□□ 0.75
USP42-207ENST00000521713 SYNE3Q6ZMZ3 975 aa19.75■□□□□ 0.75
USP42-207ENST00000521713 SPG7Q9UQ90 795 aa19.75■□□□□ 0.75
USP42-207ENST00000521713 ZKSCAN1P17029 563 aaPredicted RBP19.75■□□□□ 0.75
USP42-207ENST00000521713 NUDT16Q96DE0 195 aaKnown RBP19.75■□□□□ 0.75
USP42-207ENST00000521713 UBTFL1P0CB47 393 aaPredicted RBP19.75■□□□□ 0.75
USP42-207ENST00000521713 RBM33Q96EV2 1170 aaKnown RBP19.74■□□□□ 0.75
USP42-207ENST00000521713 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.74■□□□□ 0.75
USP42-207ENST00000521713 MAP7D2Q96T17 732 aa19.74■□□□□ 0.75
USP42-207ENST00000521713 GNAI3P08754 354 aa19.74■□□□□ 0.75
USP42-207ENST00000521713 MTERF4Q7Z6M4 381 aaKnown RBP19.74■□□□□ 0.75
USP42-207ENST00000521713 NOL8Q76FK4 1167 aaKnown RBP19.74■□□□□ 0.75
USP42-207ENST00000521713 RASSF8Q8NHQ8 419 aa19.74■□□□□ 0.75
USP42-207ENST00000521713 AKAP17AQ02040 695 aaKnown RBP19.73■□□□□ 0.75
USP42-207ENST00000521713 KCNH5Q8NCM2 988 aa19.73■□□□□ 0.75
USP42-207ENST00000521713 TRIM34Q9BYJ4 488 aa19.73■□□□□ 0.75
USP42-207ENST00000521713 ERC2O15083 957 aa19.73■□□□□ 0.75
USP42-207ENST00000521713 PHF23Q9BUL5 403 aaPredicted RBP19.73■□□□□ 0.75
USP42-207ENST00000521713 ZNF530Q6P9A1 599 aaPredicted RBP19.72■□□□□ 0.75
USP42-207ENST00000521713 NCOA1Q15788 1441 aa19.72■□□□□ 0.75
USP42-207ENST00000521713 PTPN23Q9H3S7 1636 aa19.72■□□□□ 0.75
USP42-207ENST00000521713 NUTM2BA6NNL0 878 aaPredicted RBP19.71■□□□□ 0.75
USP42-207ENST00000521713 NUTM2EB1AL46 878 aaPredicted RBP19.71■□□□□ 0.75
USP42-207ENST00000521713 NUTM2AQ8IVF1 878 aaPredicted RBP19.71■□□□□ 0.75
USP42-207ENST00000521713 UNC13AQ9UPW8 1703 aa19.71■□□□□ 0.75
USP42-207ENST00000521713 DHX29Q7Z478 1369 aaKnown RBP19.71■□□□□ 0.75
USP42-207ENST00000521713 RBM42Q9BTD8 480 aaKnown RBP19.71■□□□□ 0.75
USP42-207ENST00000521713 MARCH6O60337 910 aa19.71■□□□□ 0.75
USP42-207ENST00000521713 IDI1Q13907 227 aa19.7■□□□□ 0.74
USP42-207ENST00000521713 RNF20Q5VTR2 975 aa19.7■□□□□ 0.74
USP42-207ENST00000521713 KIF6Q6ZMV9 814 aa19.7■□□□□ 0.74
USP42-207ENST00000521713 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
USP42-207ENST00000521713 CABP4P57796 275 aa19.69■□□□□ 0.74
USP42-207ENST00000521713 FAM184AQ8NB25 1140 aa19.69■□□□□ 0.74
USP42-207ENST00000521713 APPP05067 770 aa19.69■□□□□ 0.74
USP42-207ENST00000521713 SF3A1Q15459 793 aaKnown RBP19.69■□□□□ 0.74
USP42-207ENST00000521713 DDX49Q9Y6V7 483 aaKnown RBP19.69■□□□□ 0.74
USP42-207ENST00000521713 HMGB2P26583 209 aaKnown RBP19.68■□□□□ 0.74
USP42-207ENST00000521713 TRDNQ13061 729 aa19.68■□□□□ 0.74
USP42-207ENST00000521713 TWISTNBQ3B726 338 aaPredicted RBP19.68■□□□□ 0.74
USP42-207ENST00000521713 DMRT2Q9Y5R5 561 aa19.68■□□□□ 0.74
USP42-207ENST00000521713 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
USP42-207ENST00000521713 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
USP42-207ENST00000521713 SF3B2Q13435 895 aaKnown RBP19.67■□□□□ 0.74
USP42-207ENST00000521713 H3BQV1 296 aa19.67■□□□□ 0.74
USP42-207ENST00000521713 IFFO2Q5TF58 517 aa19.67■□□□□ 0.74
USP42-207ENST00000521713 TEX14Q8IWB6 1497 aa19.66■□□□□ 0.74
USP42-207ENST00000521713 HDGFL1Q5TGJ6 251 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms