RNA–Protein interactions for RNA: ENST00000521590.5

SDC2-206, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-206ENST00000521590 BRWD3Q6RI45 1802 aa8.61□□□□□ -1.03
SDC2-206ENST00000521590 KIF3BO15066 747 aa8.6□□□□□ -1.03
SDC2-206ENST00000521590 ERVK-7P63135 1459 aa8.59□□□□□ -1.03
SDC2-206ENST00000521590 PSDA5PKW4 1024 aaPredicted RBP8.59□□□□□ -1.03
SDC2-206ENST00000521590 IER5LQ5T953 404 aa8.59□□□□□ -1.03
SDC2-206ENST00000521590 BLMP54132 1417 aaPredicted RBP8.59□□□□□ -1.03
SDC2-206ENST00000521590 SETD5Q9C0A6 1442 aa8.59□□□□□ -1.03
SDC2-206ENST00000521590 GPATCH8Q9UKJ3 1502 aaKnown RBP8.59□□□□□ -1.03
SDC2-206ENST00000521590 SLC26A8Q96RN1 970 aa8.58□□□□□ -1.04
SDC2-206ENST00000521590 UTRNP46939 3433 aa8.57□□□□□ -1.04
SDC2-206ENST00000521590 FMN1Q68DA7 1419 aa8.57□□□□□ -1.04
SDC2-206ENST00000521590 TMEM106CQ9BVX2 250 aa8.57□□□□□ -1.04
SDC2-206ENST00000521590 PIK3C2BO00750 1634 aa8.57□□□□□ -1.04
SDC2-206ENST00000521590 CAMSAP2Q08AD1 1489 aa8.57□□□□□ -1.04
SDC2-206ENST00000521590 RTEL1-TNFRSF6BF6WH68 1400 aa8.56□□□□□ -1.04
SDC2-206ENST00000521590 ATRNO75882 1429 aa8.56□□□□□ -1.04
SDC2-206ENST00000521590 ZBTB47Q9UFB7 747 aaPredicted RBP8.56□□□□□ -1.04
SDC2-206ENST00000521590 EID1Q9Y6B2 187 aa8.56□□□□□ -1.04
SDC2-206ENST00000521590 PLEKHH2Q8IVE3 1493 aa8.56□□□□□ -1.04
SDC2-206ENST00000521590 MROH1Q8NDA8 1641 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 CEP152O94986 1710 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 FKBP8Q14318 412 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 BRINP3Q76B58 766 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 FAM212AQ96EL1 285 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 TRPC5Q9UL62 973 aaPredicted RBP8.55□□□□□ -1.04
SDC2-206ENST00000521590 TMEM2Q9UHN6 1383 aa8.55□□□□□ -1.04
SDC2-206ENST00000521590 SPHKAPQ2M3C7 1700 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 MBD5Q9P267 1494 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 PNPLA6Q8IY17 1366 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 C1QTNF8P60827 252 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 FNBP4Q8N3X1 1017 aaPredicted RBP8.54□□□□□ -1.04
SDC2-206ENST00000521590 USP21Q9UK80 565 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 NCOA3Q9Y6Q9 1424 aa8.54□□□□□ -1.04
SDC2-206ENST00000521590 CAMTA1Q9Y6Y1 1673 aa8.53□□□□□ -1.04
SDC2-206ENST00000521590 UNC13BO14795 1591 aa8.53□□□□□ -1.04
SDC2-206ENST00000521590 IRX5P78411 483 aaPredicted RBP8.53□□□□□ -1.04
SDC2-206ENST00000521590 ZNF784Q8NCA9 323 aaPredicted RBP8.53□□□□□ -1.04
SDC2-206ENST00000521590 SLAIN1Q8ND83 568 aa8.53□□□□□ -1.04
SDC2-206ENST00000521590 ADAMTS2O95450 1211 aa8.52□□□□□ -1.05
SDC2-206ENST00000521590 LRRC59Q96AG4 307 aaKnown RBP8.52□□□□□ -1.05
SDC2-206ENST00000521590 ASXL1Q8IXJ9 1541 aa8.52□□□□□ -1.05
SDC2-206ENST00000521590 MARF1Q9Y4F3 1742 aaKnown RBP8.51□□□□□ -1.05
SDC2-206ENST00000521590 CADPS2Q86UW7 1296 aa8.51□□□□□ -1.05
SDC2-206ENST00000521590 ARHGAP35Q9NRY4 1499 aa8.51□□□□□ -1.05
SDC2-206ENST00000521590 ST18O60284 1047 aa8.5□□□□□ -1.05
SDC2-206ENST00000521590 PYGBP11216 843 aa8.5□□□□□ -1.05
SDC2-206ENST00000521590 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
SDC2-206ENST00000521590 C19orf44Q9H6X5 657 aa8.5□□□□□ -1.05
SDC2-206ENST00000521590 CHD4Q14839 1912 aa8.5□□□□□ -1.05
SDC2-206ENST00000521590 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
SDC2-206ENST00000521590 GLI3P10071 1580 aa8.49□□□□□ -1.05
SDC2-206ENST00000521590 PLCG2P16885 1265 aa8.49□□□□□ -1.05
SDC2-206ENST00000521590 CFDP1Q9UEE9 299 aaPredicted RBP8.49□□□□□ -1.05
SDC2-206ENST00000521590 EFCAB6Q5THR3 1501 aa8.49□□□□□ -1.05
SDC2-206ENST00000521590 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.49□□□□□ -1.05
SDC2-206ENST00000521590 ATF3P18847 181 aa8.48□□□□□ -1.05
SDC2-206ENST00000521590 R3HDM1Q15032 1099 aaKnown RBP8.48□□□□□ -1.05
SDC2-206ENST00000521590 CCDC18Q5T9S5 1454 aa8.47□□□□□ -1.05
SDC2-206ENST00000521590 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
SDC2-206ENST00000521590 DCAF8Q5TAQ9 597 aa8.47□□□□□ -1.05
SDC2-206ENST00000521590 DDX17Q92841 729 aaKnown RBP8.47□□□□□ -1.05
SDC2-206ENST00000521590 GJD4Q96KN9 370 aaPredicted RBP8.47□□□□□ -1.05
SDC2-206ENST00000521590 PCDHB8Q9UN66 801 aa8.47□□□□□ -1.05
SDC2-206ENST00000521590 LAMC1P11047 1609 aa8.47□□□□□ -1.05
SDC2-206ENST00000521590 PTCH1Q13635 1447 aa8.46□□□□□ -1.05
SDC2-206ENST00000521590 MYO5BQ9ULV0 1848 aa8.46□□□□□ -1.06
SDC2-206ENST00000521590 COL22A1Q8NFW1 1626 aaPredicted RBP8.46□□□□□ -1.06
SDC2-206ENST00000521590 MST1RQ04912 1400 aa8.45□□□□□ -1.06
SDC2-206ENST00000521590 ARHGAP31Q2M1Z3 1444 aa8.45□□□□□ -1.06
SDC2-206ENST00000521590 EIF2AK4Q9P2K8 1649 aaKnown RBP8.44□□□□□ -1.06
SDC2-206ENST00000521590 C14orf37Q86TY3 774 aa8.44□□□□□ -1.06
SDC2-206ENST00000521590 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
SDC2-206ENST00000521590 RGPD1P0DJD0 1748 aa8.43□□□□□ -1.06
SDC2-206ENST00000521590 BAG6P46379 1132 aa8.43□□□□□ -1.06
SDC2-206ENST00000521590 IDI1Q13907 227 aa8.43□□□□□ -1.06
SDC2-206ENST00000521590 RALGAPBQ86X10 1494 aa8.43□□□□□ -1.06
SDC2-206ENST00000521590 SLC34A2O95436 690 aa8.42□□□□□ -1.06
SDC2-206ENST00000521590 EN1Q05925 392 aaPredicted RBP8.42□□□□□ -1.06
SDC2-206ENST00000521590 CCNB3Q8WWL7 1395 aa8.42□□□□□ -1.06
SDC2-206ENST00000521590 DCCP43146 1447 aa8.42□□□□□ -1.06
SDC2-206ENST00000521590 CASKIN1Q8WXD9 1431 aa8.42□□□□□ -1.06
SDC2-206ENST00000521590 TNS1Q9HBL0 1735 aaKnown RBP8.42□□□□□ -1.06
SDC2-206ENST00000521590 CCDC141Q6ZP82 1450 aa8.41□□□□□ -1.06
SDC2-206ENST00000521590 TBX22Q9Y458 520 aa8.41□□□□□ -1.06
SDC2-206ENST00000521590 ADGRB3O60242 1522 aa8.4□□□□□ -1.06
SDC2-206ENST00000521590 ZFYVE9O95405 1425 aa8.4□□□□□ -1.06
SDC2-206ENST00000521590 PLEKHG1Q9ULL1 1385 aa8.4□□□□□ -1.06
SDC2-206ENST00000521590 BCANQ96GW7 911 aa8.4□□□□□ -1.06
SDC2-206ENST00000521590 NINLQ9Y2I6 1382 aa8.39□□□□□ -1.07
SDC2-206ENST00000521590 ONECUT3O60422 494 aaPredicted RBP8.39□□□□□ -1.07
SDC2-206ENST00000521590 SEPT12Q8IYM1 358 aa8.39□□□□□ -1.07
SDC2-206ENST00000521590 PDCD7Q8N8D1 485 aaKnown RBP8.39□□□□□ -1.07
SDC2-206ENST00000521590 MYOM2P54296 1465 aa8.38□□□□□ -1.07
SDC2-206ENST00000521590 SOS2Q07890 1332 aaPredicted RBP8.38□□□□□ -1.07
SDC2-206ENST00000521590 TRPM2O94759 1503 aa8.38□□□□□ -1.07
SDC2-206ENST00000521590 ADAMTS13Q76LX8 1427 aa8.37□□□□□ -1.07
SDC2-206ENST00000521590 RREB1Q92766 1687 aa8.37□□□□□ -1.07
SDC2-206ENST00000521590 PPP1R15AO75807 674 aaPredicted RBP8.37□□□□□ -1.07
SDC2-206ENST00000521590 KRT27Q7Z3Y8 459 aa8.37□□□□□ -1.07
SDC2-206ENST00000521590 SLIT2O94813 1529 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms