RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RETREG3Q86VR2 466 aa7.4□□□□□ -1.22
VPS13B-209ENST00000521559 MOXD2PA6NHM9 499 aa7.39□□□□□ -1.23
VPS13B-209ENST00000521559 ZBTB24O43167 697 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-209ENST00000521559 MMP16P51512 607 aa7.39□□□□□ -1.23
VPS13B-209ENST00000521559 GUCA2AQ02747 115 aa7.39□□□□□ -1.23
VPS13B-209ENST00000521559 HLA-CQ95604 372 aa7.39□□□□□ -1.23
VPS13B-209ENST00000521559 FCF1Q9Y324 198 aaKnown RBP7.39□□□□□ -1.23
VPS13B-209ENST00000521559 CD2BP2O95400 341 aaKnown RBP7.38□□□□□ -1.23
VPS13B-209ENST00000521559 RPIAP49247 311 aa7.38□□□□□ -1.23
VPS13B-209ENST00000521559 SPRYD7Q5W111 196 aa7.38□□□□□ -1.23
VPS13B-209ENST00000521559 RSPH6AQ9H0K4 717 aa7.38□□□□□ -1.23
VPS13B-209ENST00000521559 DXOO77932 396 aaKnown RBP7.37□□□□□ -1.23
VPS13B-209ENST00000521559 NDUFV2P19404 249 aa7.37□□□□□ -1.23
VPS13B-209ENST00000521559 ZNF598Q86UK7 904 aaKnown RBP7.37□□□□□ -1.23
VPS13B-209ENST00000521559 SPTLC1O15269 473 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 JUNDP17535 347 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 MTMR2Q13614 643 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 RSBN1LQ6PCB5 846 aaPredicted RBP7.36□□□□□ -1.23
VPS13B-209ENST00000521559 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 PRDM9Q9NQV7 894 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 PCDHGC3Q9UN70 934 aa7.36□□□□□ -1.23
VPS13B-209ENST00000521559 GFRA3O60609 400 aa7.35□□□□□ -1.23
VPS13B-209ENST00000521559 RIC3Q7Z5B4 369 aa7.35□□□□□ -1.23
VPS13B-209ENST00000521559 SYMPKQ92797 1274 aaKnown RBP7.35□□□□□ -1.23
VPS13B-209ENST00000521559 DDRGK1Q96HY6 314 aa7.35□□□□□ -1.23
VPS13B-209ENST00000521559 NRG2O14511 850 aaPredicted RBP7.34□□□□□ -1.23
VPS13B-209ENST00000521559 TUSC1Q2TAM9 212 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 PLA2G2CQ5R387 149 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 ZNF697Q5TEC3 545 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 PRPF38BQ5VTL8 546 aaKnown RBP7.34□□□□□ -1.23
VPS13B-209ENST00000521559 KDM4CQ9H3R0 1056 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 ZBTB3Q9H5J0 574 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 PDZRN3Q9UPQ7 1066 aa7.34□□□□□ -1.23
VPS13B-209ENST00000521559 MYSM1Q5VVJ2 828 aa7.33□□□□□ -1.24
VPS13B-209ENST00000521559 DESI1Q6ICB0 168 aa7.33□□□□□ -1.24
VPS13B-209ENST00000521559 CCDC24Q8N4L8 307 aa7.33□□□□□ -1.24
VPS13B-209ENST00000521559 PRR7Q8TB68 274 aa7.32□□□□□ -1.24
VPS13B-209ENST00000521559 EMID1Q96A84 441 aaPredicted RBP7.32□□□□□ -1.24
VPS13B-209ENST00000521559 PRR20EP86478 221 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 PRR20CP86479 221 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 PRR20DP86480 221 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 PRR20BP86481 221 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 PRR20AP86496 221 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 NUDT12Q9BQG2 462 aa7.31□□□□□ -1.24
VPS13B-209ENST00000521559 GPBP1L1Q9HC44 474 aaPredicted RBP7.31□□□□□ -1.24
VPS13B-209ENST00000521559 NUTM2BA6NNL0 878 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-209ENST00000521559 NUTM2EB1AL46 878 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-209ENST00000521559 HRCP23327 699 aa7.3□□□□□ -1.24
VPS13B-209ENST00000521559 CLK2P49760 499 aaKnown RBP7.3□□□□□ -1.24
VPS13B-209ENST00000521559 PTPRNQ16849 979 aa7.3□□□□□ -1.24
VPS13B-209ENST00000521559 TPRNQ4KMQ1 711 aa7.3□□□□□ -1.24
VPS13B-209ENST00000521559 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-209ENST00000521559 Q6ZNB5 142 aa7.3□□□□□ -1.24
VPS13B-209ENST00000521559 NUTM2AQ8IVF1 878 aaPredicted RBP7.3□□□□□ -1.24
VPS13B-209ENST00000521559 PCDHB15Q9Y5E8 787 aa7.3□□□□□ -1.24
VPS13B-209ENST00000521559 CCNYL3P0C7X3 344 aa7.29□□□□□ -1.24
VPS13B-209ENST00000521559 TRIM32Q13049 653 aa7.29□□□□□ -1.24
VPS13B-209ENST00000521559 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
VPS13B-209ENST00000521559 SKIV2LQ15477 1246 aaKnown RBP7.28□□□□□ -1.24
VPS13B-209ENST00000521559 NEUROD2Q15784 382 aa7.28□□□□□ -1.24
VPS13B-209ENST00000521559 ATP1B4Q9UN42 357 aaPredicted RBP7.28□□□□□ -1.24
VPS13B-209ENST00000521559 GDF9O60383 454 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 SH3D19Q5HYK7 790 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 FAM117AQ9C073 453 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 EVA1BQ9NVM1 165 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 POLR3EQ9NVU0 708 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 LIMD1Q9UGP4 676 aa7.27□□□□□ -1.25
VPS13B-209ENST00000521559 LILRB3O75022 631 aa7.26□□□□□ -1.25
VPS13B-209ENST00000521559 WNT7BP56706 349 aa7.26□□□□□ -1.25
VPS13B-209ENST00000521559 FOXC1Q12948 553 aa7.26□□□□□ -1.25
VPS13B-209ENST00000521559 LYPD8Q6UX82 237 aa7.26□□□□□ -1.25
VPS13B-209ENST00000521559 HELBQ8NG08 1087 aaPredicted RBP7.26□□□□□ -1.25
VPS13B-209ENST00000521559 TNFRSF10AO00220 468 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 DGAT1O75907 488 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 KCNH2Q12809 1159 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 PKDCCQ504Y2 493 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 TRIM67Q6ZTA4 783 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 CYP4X1Q8N118 509 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 CABLES1Q8TDN4 633 aa7.25□□□□□ -1.25
VPS13B-209ENST00000521559 CFAP99D6REC4 459 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 WNT7AO00755 349 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 QPCTQ16769 361 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 TRAF7Q6Q0C0 670 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 TSC1Q92574 1164 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 PKD2L1Q9P0L9 805 aa7.24□□□□□ -1.25
VPS13B-209ENST00000521559 CTHP32929 405 aa7.23□□□□□ -1.25
VPS13B-209ENST00000521559 GOPCQ9HD26 462 aa7.23□□□□□ -1.25
VPS13B-209ENST00000521559 PLEKHG3A1L390 1219 aa7.22□□□□□ -1.25
VPS13B-209ENST00000521559 UNC93B1Q9H1C4 597 aa7.22□□□□□ -1.25
VPS13B-209ENST00000521559 TTC24A2A3L6 582 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-209ENST00000521559 FAM187AA6NFU0 413 aa7.21□□□□□ -1.26
VPS13B-209ENST00000521559 RC3H1Q5TC82 1133 aaKnown RBP7.21□□□□□ -1.26
VPS13B-209ENST00000521559 PTCRAQ6ISU1 281 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-209ENST00000521559 SNIP1Q8TAD8 396 aaKnown RBP7.21□□□□□ -1.26
VPS13B-209ENST00000521559 PCMTD1Q96MG8 357 aaPredicted RBP7.21□□□□□ -1.26
VPS13B-209ENST00000521559 BRPF1P55201 1214 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-209ENST00000521559 RTL5Q5HYW3 569 aaPredicted RBP7.2□□□□□ -1.26
VPS13B-209ENST00000521559 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
VPS13B-209ENST00000521559 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.2□□□□□ -1.26
VPS13B-209ENST00000521559 TOR4AQ9NXH8 423 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms