RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 RAB3GAP2Q9H2M9 1393 aa15.04■□□□□ -0
TRIM35-204ENST00000521283 MSH6P52701 1360 aa15.03■□□□□ -0
TRIM35-204ENST00000521283 PIP4K2BP78356 416 aa15.02■□□□□ -0
TRIM35-204ENST00000521283 NUTM2DQ5VT03 806 aaPredicted RBP15.02■□□□□ -0
TRIM35-204ENST00000521283 ANKRD30BQ9BXX2 1392 aa15.01□□□□□ -0.01
TRIM35-204ENST00000521283 PPLO60437 1756 aa15.01□□□□□ -0.01
TRIM35-204ENST00000521283 AMOTL2Q9Y2J4 779 aa15□□□□□ -0.01
TRIM35-204ENST00000521283 NRXN3Q9Y4C0 1643 aa14.99□□□□□ -0.01
TRIM35-204ENST00000521283 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
TRIM35-204ENST00000521283 FAM135BQ49AJ0 1406 aa14.99□□□□□ -0.01
TRIM35-204ENST00000521283 CLCN6P51797 869 aa14.98□□□□□ -0.01
TRIM35-204ENST00000521283 MIER1Q8N108 512 aa14.98□□□□□ -0.01
TRIM35-204ENST00000521283 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
TRIM35-204ENST00000521283 ALKQ9UM73 1620 aa14.97□□□□□ -0.01
TRIM35-204ENST00000521283 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
TRIM35-204ENST00000521283 SPATA31E1Q6ZUB1 1445 aa14.97□□□□□ -0.01
TRIM35-204ENST00000521283 C14orf37Q86TY3 774 aa14.96□□□□□ -0.01
TRIM35-204ENST00000521283 XRN1Q8IZH2 1706 aaKnown RBP14.95□□□□□ -0.02
TRIM35-204ENST00000521283 DCCP43146 1447 aa14.95□□□□□ -0.02
TRIM35-204ENST00000521283 POTEIP0CG38 1075 aa14.95□□□□□ -0.02
TRIM35-204ENST00000521283 PAK3O75914 559 aaPredicted RBP14.94□□□□□ -0.02
TRIM35-204ENST00000521283 ATF3P18847 181 aa14.94□□□□□ -0.02
TRIM35-204ENST00000521283 HSPA1LP34931 641 aa14.94□□□□□ -0.02
TRIM35-204ENST00000521283 SLAIN2Q9P270 581 aa14.94□□□□□ -0.02
TRIM35-204ENST00000521283 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
TRIM35-204ENST00000521283 PRAG1Q86YV5 1406 aa14.93□□□□□ -0.02
TRIM35-204ENST00000521283 RGL3Q3MIN7 710 aa14.93□□□□□ -0.02
TRIM35-204ENST00000521283 METP08581 1390 aa14.93□□□□□ -0.02
TRIM35-204ENST00000521283 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
TRIM35-204ENST00000521283 PHF12Q96QT6 1004 aa14.92□□□□□ -0.02
TRIM35-204ENST00000521283 PTCH1Q13635 1447 aa14.92□□□□□ -0.02
TRIM35-204ENST00000521283 SETD1AO15047 1707 aaKnown RBP14.91□□□□□ -0.02
TRIM35-204ENST00000521283 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.91□□□□□ -0.02
TRIM35-204ENST00000521283 ROBO1Q9Y6N7 1651 aa14.89□□□□□ -0.03
TRIM35-204ENST00000521283 MYOM2P54296 1465 aa14.89□□□□□ -0.03
TRIM35-204ENST00000521283 LAMC1P11047 1609 aa14.88□□□□□ -0.03
TRIM35-204ENST00000521283 GALR2O43603 387 aaPredicted RBP14.88□□□□□ -0.03
TRIM35-204ENST00000521283 RBM33Q96EV2 1170 aaKnown RBP14.88□□□□□ -0.03
TRIM35-204ENST00000521283 ADGRF5Q8IZF2 1346 aa14.88□□□□□ -0.03
TRIM35-204ENST00000521283 PIK3C2GO75747 1445 aa14.87□□□□□ -0.03
TRIM35-204ENST00000521283 PLEKHG5O94827 1062 aa14.87□□□□□ -0.03
TRIM35-204ENST00000521283 PLCD3Q8N3E9 789 aa14.87□□□□□ -0.03
TRIM35-204ENST00000521283 DISP3Q9P2K9 1392 aa14.86□□□□□ -0.03
TRIM35-204ENST00000521283 ADGRL3Q9HAR2 1447 aa14.86□□□□□ -0.03
TRIM35-204ENST00000521283 SIRT1Q96EB6 747 aa14.86□□□□□ -0.03
TRIM35-204ENST00000521283 NRXN1Q9ULB1 1477 aa14.86□□□□□ -0.03
TRIM35-204ENST00000521283 C14orf93Q9H972 538 aaKnown RBP14.85□□□□□ -0.03
TRIM35-204ENST00000521283 ABCC11Q96J66 1382 aa14.85□□□□□ -0.03
TRIM35-204ENST00000521283 TECPR2O15040 1411 aa14.84□□□□□ -0.03
TRIM35-204ENST00000521283 TSPYL2Q9H2G4 693 aaPredicted RBP14.84□□□□□ -0.03
TRIM35-204ENST00000521283 LRPPRCP42704 1394 aaKnown RBP14.84□□□□□ -0.03
TRIM35-204ENST00000521283 DHX57Q6P158 1386 aaKnown RBP14.84□□□□□ -0.03
TRIM35-204ENST00000521283 KNDC1Q76NI1 1749 aa14.83□□□□□ -0.04
TRIM35-204ENST00000521283 PHLPP1O60346 1717 aa14.82□□□□□ -0.04
TRIM35-204ENST00000521283 ROBO2Q9HCK4 1378 aa14.81□□□□□ -0.04
TRIM35-204ENST00000521283 AHDC1Q5TGY3 1603 aaPredicted RBP14.81□□□□□ -0.04
TRIM35-204ENST00000521283 NALCNQ8IZF0 1738 aa14.8□□□□□ -0.04
TRIM35-204ENST00000521283 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
TRIM35-204ENST00000521283 CCDC61Q9Y6R9 512 aa14.8□□□□□ -0.04
TRIM35-204ENST00000521283 MST1RQ04912 1400 aa14.8□□□□□ -0.04
TRIM35-204ENST00000521283 YTHDC2Q9H6S0 1430 aaKnown RBP14.8□□□□□ -0.04
TRIM35-204ENST00000521283 MED1Q15648 1581 aaPredicted RBP14.79□□□□□ -0.04
TRIM35-204ENST00000521283 DCAF11Q8TEB1 546 aa14.79□□□□□ -0.04
TRIM35-204ENST00000521283 DCBLD2Q96PD2 775 aa14.79□□□□□ -0.04
TRIM35-204ENST00000521283 JCADQ9P266 1359 aa14.79□□□□□ -0.04
TRIM35-204ENST00000521283 BRINP3Q76B58 766 aa14.78□□□□□ -0.04
TRIM35-204ENST00000521283 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
TRIM35-204ENST00000521283 CDC42BPGQ6DT37 1551 aa14.77□□□□□ -0.05
TRIM35-204ENST00000521283 SPATA31A6Q5VVP1 1343 aa14.76□□□□□ -0.05
TRIM35-204ENST00000521283 CFAP70Q5T0N1 1121 aa14.76□□□□□ -0.05
TRIM35-204ENST00000521283 TMEM132EQ6IEE7 984 aa14.76□□□□□ -0.05
TRIM35-204ENST00000521283 STK26Q9P289 416 aa14.76□□□□□ -0.05
TRIM35-204ENST00000521283 ASXL1Q8IXJ9 1541 aa14.76□□□□□ -0.05
TRIM35-204ENST00000521283 COL16A1Q07092 1604 aaPredicted RBP14.75□□□□□ -0.05
TRIM35-204ENST00000521283 LRRC59Q96AG4 307 aaKnown RBP14.75□□□□□ -0.05
TRIM35-204ENST00000521283 FBXO3Q9UK99 471 aa14.75□□□□□ -0.05
TRIM35-204ENST00000521283 DLC1Q96QB1 1528 aa14.75□□□□□ -0.05
TRIM35-204ENST00000521283 C1orf167Q5SNV9 1468 aa14.75□□□□□ -0.05
TRIM35-204ENST00000521283 NHSL1Q5SYE7 1610 aa14.74□□□□□ -0.05
TRIM35-204ENST00000521283 KDM2AQ9Y2K7 1162 aa14.74□□□□□ -0.05
TRIM35-204ENST00000521283 KIAA1210Q9ULL0 1709 aa14.73□□□□□ -0.05
TRIM35-204ENST00000521283 MS4A3Q96HJ5 214 aa14.73□□□□□ -0.05
TRIM35-204ENST00000521283 SHPRHQ149N8 1683 aa14.73□□□□□ -0.05
TRIM35-204ENST00000521283 NUBP1P53384 320 aa14.72□□□□□ -0.05
TRIM35-204ENST00000521283 WAPLQ7Z5K2 1190 aa14.71□□□□□ -0.05
TRIM35-204ENST00000521283 POGKQ9P215 609 aa14.71□□□□□ -0.05
TRIM35-204ENST00000521283 ZBTB47Q9UFB7 747 aaPredicted RBP14.71□□□□□ -0.05
TRIM35-204ENST00000521283 ADGRB1O14514 1584 aa14.7□□□□□ -0.06
TRIM35-204ENST00000521283 EIF3AQ14152 1382 aaKnown RBP14.7□□□□□ -0.06
TRIM35-204ENST00000521283 NPHP3Q7Z494 1330 aa14.69□□□□□ -0.06
TRIM35-204ENST00000521283 LHX8Q68G74 356 aa14.69□□□□□ -0.06
TRIM35-204ENST00000521283 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
TRIM35-204ENST00000521283 KIF12Q96FN5 646 aa14.68□□□□□ -0.06
TRIM35-204ENST00000521283 PRAM1Q96QH2 718 aa14.68□□□□□ -0.06
TRIM35-204ENST00000521283 FMN2Q9NZ56 1722 aa14.68□□□□□ -0.06
TRIM35-204ENST00000521283 SOS2Q07890 1332 aaPredicted RBP14.67□□□□□ -0.06
TRIM35-204ENST00000521283 KIF1AQ12756 1690 aa14.67□□□□□ -0.06
TRIM35-204ENST00000521283 ADGRB2O60241 1585 aa14.66□□□□□ -0.06
TRIM35-204ENST00000521283 ORAI2Q96SN7 254 aa14.66□□□□□ -0.06
TRIM35-204ENST00000521283 ANKARQ7Z5J8 1434 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms