RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 DCCP43146 1447 aa24.62■■□□□ 1.53
TRAM1-203ENST00000520700 C14orf37Q86TY3 774 aa24.6■■□□□ 1.53
TRAM1-203ENST00000520700 SBNO2Q9Y2G9 1366 aa24.59■■□□□ 1.53
TRAM1-203ENST00000520700 SLC24A1O60721 1099 aa24.59■■□□□ 1.53
TRAM1-203ENST00000520700 CADPS2Q86UW7 1296 aa24.59■■□□□ 1.53
TRAM1-203ENST00000520700 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.58■■□□□ 1.53
TRAM1-203ENST00000520700 USP47Q96K76 1375 aa24.58■■□□□ 1.53
TRAM1-203ENST00000520700 ATF3P18847 181 aa24.56■■□□□ 1.52
TRAM1-203ENST00000520700 SAFB2Q14151 953 aaKnown RBP eCLIP24.56■■□□□ 1.52
TRAM1-203ENST00000520700 ST20-MTHFSA0A0A6YYL1 179 aa24.55■■□□□ 1.52
TRAM1-203ENST00000520700 EIF4G2P78344 907 aaKnown RBP eCLIP24.55■■□□□ 1.52
TRAM1-203ENST00000520700 ADGRB2O60241 1585 aa24.54■■□□□ 1.52
TRAM1-203ENST00000520700 TOM1O60784 492 aa24.54■■□□□ 1.52
TRAM1-203ENST00000520700 NALCNQ8IZF0 1738 aa24.54■■□□□ 1.52
TRAM1-203ENST00000520700 MINK1Q8N4C8 1332 aaPredicted RBP24.54■■□□□ 1.52
TRAM1-203ENST00000520700 CDC42BPGQ6DT37 1551 aa24.54■■□□□ 1.52
TRAM1-203ENST00000520700 TESK2Q96S53 571 aa24.53■■□□□ 1.52
TRAM1-203ENST00000520700 WASLO00401 505 aaPredicted RBP24.52■■□□□ 1.52
TRAM1-203ENST00000520700 SLAIN2Q9P270 581 aa24.5■■□□□ 1.51
TRAM1-203ENST00000520700 PUS7Q96PZ0 661 aaKnown RBP24.49■■□□□ 1.51
TRAM1-203ENST00000520700 HIRIP3Q9BW71 556 aaPredicted RBP24.49■■□□□ 1.51
TRAM1-203ENST00000520700 HSPA5P11021 654 aaKnown RBP24.48■■□□□ 1.51
TRAM1-203ENST00000520700 QRICH2Q9H0J4 1663 aa24.48■■□□□ 1.51
TRAM1-203ENST00000520700 MST1RQ04912 1400 aa24.47■■□□□ 1.51
TRAM1-203ENST00000520700 EVC2Q86UK5 1308 aa24.47■■□□□ 1.51
TRAM1-203ENST00000520700 UBAP1LF5GYI3 381 aa24.47■■□□□ 1.51
TRAM1-203ENST00000520700 CDK19Q9BWU1 502 aa24.47■■□□□ 1.51
TRAM1-203ENST00000520700 ANKARQ7Z5J8 1434 aa24.45■■□□□ 1.51
TRAM1-203ENST00000520700 C1orf167Q5SNV9 1468 aa24.45■■□□□ 1.5
TRAM1-203ENST00000520700 FMN2Q9NZ56 1722 aa24.42■■□□□ 1.5
TRAM1-203ENST00000520700 TULP4Q9NRJ4 1543 aa24.41■■□□□ 1.5
TRAM1-203ENST00000520700 TMF1P82094 1093 aa24.41■■□□□ 1.5
TRAM1-203ENST00000520700 NUDT16Q96DE0 195 aaKnown RBP24.39■■□□□ 1.49
TRAM1-203ENST00000520700 PRR36Q9H6K5 1346 aa24.38■■□□□ 1.49
TRAM1-203ENST00000520700 SRPK2P78362 688 aaKnown RBP24.38■■□□□ 1.49
TRAM1-203ENST00000520700 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
TRAM1-203ENST00000520700 FBXO41Q8TF61 875 aa24.38■■□□□ 1.49
TRAM1-203ENST00000520700 CCDC61Q9Y6R9 512 aa24.38■■□□□ 1.49
TRAM1-203ENST00000520700 BRINP3Q76B58 766 aa24.37■■□□□ 1.49
TRAM1-203ENST00000520700 CABP2Q9NPB3 220 aa24.37■■□□□ 1.49
TRAM1-203ENST00000520700 ATP7BP35670 1465 aa24.35■■□□□ 1.49
TRAM1-203ENST00000520700 ATAD2Q6PL18 1390 aa24.35■■□□□ 1.49
TRAM1-203ENST00000520700 ORAI2Q96SN7 254 aa24.35■■□□□ 1.49
TRAM1-203ENST00000520700 PLEKHG3A1L390 1219 aa24.34■■□□□ 1.49
TRAM1-203ENST00000520700 NUTM2FA1L443 756 aa24.34■■□□□ 1.49
TRAM1-203ENST00000520700 ESCO1Q5FWF5 840 aa24.34■■□□□ 1.49
TRAM1-203ENST00000520700 USP32Q8NFA0 1604 aa24.34■■□□□ 1.49
TRAM1-203ENST00000520700 DISP3Q9P2K9 1392 aa24.33■■□□□ 1.49
TRAM1-203ENST00000520700 PIP4K2BP78356 416 aa24.32■■□□□ 1.48
TRAM1-203ENST00000520700 PHF8Q9UPP1 1060 aa24.32■■□□□ 1.48
TRAM1-203ENST00000520700 NINLQ9Y2I6 1382 aa24.28■■□□□ 1.48
TRAM1-203ENST00000520700 ROBO1Q9Y6N7 1651 aa24.27■■□□□ 1.48
TRAM1-203ENST00000520700 CABP1Q9NZU7 370 aa24.27■■□□□ 1.48
TRAM1-203ENST00000520700 C11orf95C9JLR9 678 aaPredicted RBP24.26■■□□□ 1.47
TRAM1-203ENST00000520700 POLR3AO14802 1390 aaPredicted RBP24.26■■□□□ 1.47
TRAM1-203ENST00000520700 RGPD8O14715 1765 aaPredicted RBP24.26■■□□□ 1.47
TRAM1-203ENST00000520700 PPIP5K1Q6PFW1 1433 aa24.26■■□□□ 1.47
TRAM1-203ENST00000520700 KIF1AQ12756 1690 aa24.25■■□□□ 1.47
TRAM1-203ENST00000520700 TOPAZ1Q8N9V7 1692 aa24.25■■□□□ 1.47
TRAM1-203ENST00000520700 NPHP3Q7Z494 1330 aa24.25■■□□□ 1.47
TRAM1-203ENST00000520700 SCAF1Q9H7N4 1312 aaKnown RBP24.25■■□□□ 1.47
TRAM1-203ENST00000520700 ITSN1Q15811 1721 aa24.24■■□□□ 1.47
TRAM1-203ENST00000520700 FOXO3O43524 673 aa24.23■■□□□ 1.47
TRAM1-203ENST00000520700 PMFBP1Q8TBY8 1022 aa24.23■■□□□ 1.47
TRAM1-203ENST00000520700 SOS2Q07890 1332 aaPredicted RBP24.23■■□□□ 1.47
TRAM1-203ENST00000520700 AHDC1Q5TGY3 1603 aaPredicted RBP24.23■■□□□ 1.47
TRAM1-203ENST00000520700 ACEP12821 1306 aa24.22■■□□□ 1.47
TRAM1-203ENST00000520700 ZNF692Q9BU19 519 aaPredicted RBP24.22■■□□□ 1.47
TRAM1-203ENST00000520700 NGDNQ8NEJ9 315 aaKnown RBP24.21■■□□□ 1.47
TRAM1-203ENST00000520700 SLC12A5Q9H2X9 1139 aa24.21■■□□□ 1.47
TRAM1-203ENST00000520700 BRD4O60885 1362 aaPredicted RBP24.2■■□□□ 1.46
TRAM1-203ENST00000520700 CPSF1Q10570 1443 aaKnown RBP24.19■■□□□ 1.46
TRAM1-203ENST00000520700 KIF7Q2M1P5 1343 aa24.19■■□□□ 1.46
TRAM1-203ENST00000520700 PSME1Q06323 249 aa24.19■■□□□ 1.46
TRAM1-203ENST00000520700 NHSL1Q5SYE7 1610 aa24.19■■□□□ 1.46
TRAM1-203ENST00000520700 KRT28Q7Z3Y7 464 aa24.18■■□□□ 1.46
TRAM1-203ENST00000520700 TMC1Q8TDI8 760 aa24.18■■□□□ 1.46
TRAM1-203ENST00000520700 TERF2IPQ9NYB0 399 aa24.17■■□□□ 1.46
TRAM1-203ENST00000520700 PXDNQ92626 1479 aa24.17■■□□□ 1.46
TRAM1-203ENST00000520700 DDX17Q92841 729 aaKnown RBP24.16■■□□□ 1.46
TRAM1-203ENST00000520700 SBNO1A3KN83 1393 aa24.16■■□□□ 1.46
TRAM1-203ENST00000520700 CCDC7Q96M83 1385 aa24.16■■□□□ 1.46
TRAM1-203ENST00000520700 CD163L1Q9NR16 1453 aa24.15■■□□□ 1.46
TRAM1-203ENST00000520700 HSPA1LP34931 641 aa24.15■■□□□ 1.46
TRAM1-203ENST00000520700 LRRC59Q96AG4 307 aaKnown RBP24.15■■□□□ 1.46
TRAM1-203ENST00000520700 WASHC2AQ641Q2 1341 aa24.14■■□□□ 1.46
TRAM1-203ENST00000520700 HDGFL2Q7Z4V5 671 aaPredicted RBP24.14■■□□□ 1.45
TRAM1-203ENST00000520700 ANKRD36BQ8N2N9 1353 aa24.13■■□□□ 1.45
TRAM1-203ENST00000520700 SSH2Q76I76 1423 aa24.12■■□□□ 1.45
TRAM1-203ENST00000520700 USP6P35125 1406 aa24.11■■□□□ 1.45
TRAM1-203ENST00000520700 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
TRAM1-203ENST00000520700 COL16A1Q07092 1604 aaPredicted RBP24.1■■□□□ 1.45
TRAM1-203ENST00000520700 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
TRAM1-203ENST00000520700 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
TRAM1-203ENST00000520700 A0A1W2PP64 1363 aa24.09■■□□□ 1.45
TRAM1-203ENST00000520700 XPCQ01831 940 aaPredicted RBP24.09■■□□□ 1.45
TRAM1-203ENST00000520700 POLR3GLQ9BT43 218 aa24.08■■□□□ 1.45
TRAM1-203ENST00000520700 AKAP12Q02952 1782 aa24.07■■□□□ 1.44
TRAM1-203ENST00000520700 MYOM1P52179 1685 aa24.07■■□□□ 1.44
TRAM1-203ENST00000520700 TTC21AQ8NDW8 1320 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms