RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
ZNF260-201ENST00000520608 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
ZNF260-201ENST00000520608 ASXL1Q8IXJ9 1541 aa12.88□□□□□ -0.35
ZNF260-201ENST00000520608 NUTM2BA6NNL0 878 aaPredicted RBP12.87□□□□□ -0.35
ZNF260-201ENST00000520608 NUTM2EB1AL46 878 aaPredicted RBP12.87□□□□□ -0.35
ZNF260-201ENST00000520608 NUTM2AQ8IVF1 878 aaPredicted RBP12.87□□□□□ -0.35
ZNF260-201ENST00000520608 NAIPQ13075 1403 aa12.87□□□□□ -0.35
ZNF260-201ENST00000520608 RRBP1Q9P2E9 1410 aaKnown RBP12.87□□□□□ -0.35
ZNF260-201ENST00000520608 ZNF772Q68DY9 489 aaPredicted RBP12.86□□□□□ -0.35
ZNF260-201ENST00000520608 TRIM52Q96A61 297 aa12.86□□□□□ -0.35
ZNF260-201ENST00000520608 MST1RQ04912 1400 aa12.86□□□□□ -0.35
ZNF260-201ENST00000520608 KIF1BO60333 1816 aa12.85□□□□□ -0.35
ZNF260-201ENST00000520608 ADGRL3Q9HAR2 1447 aa12.85□□□□□ -0.35
ZNF260-201ENST00000520608 PRKAR2AP13861 404 aaKnown RBP12.84□□□□□ -0.35
ZNF260-201ENST00000520608 NALCNQ8IZF0 1738 aa12.84□□□□□ -0.35
ZNF260-201ENST00000520608 NHSL1Q5SYE7 1610 aa12.83□□□□□ -0.36
ZNF260-201ENST00000520608 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
ZNF260-201ENST00000520608 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
ZNF260-201ENST00000520608 SPDYE2Q495Y8 402 aa12.82□□□□□ -0.36
ZNF260-201ENST00000520608 DDX17Q92841 729 aaKnown RBP12.82□□□□□ -0.36
ZNF260-201ENST00000520608 HFM1A2PYH4 1435 aa12.81□□□□□ -0.36
ZNF260-201ENST00000520608 SETD5Q9C0A6 1442 aa12.81□□□□□ -0.36
ZNF260-201ENST00000520608 VGFO15240 615 aaPredicted RBP12.81□□□□□ -0.36
ZNF260-201ENST00000520608 LRRC59Q96AG4 307 aaKnown RBP12.81□□□□□ -0.36
ZNF260-201ENST00000520608 RXRBP28702 533 aa12.8□□□□□ -0.36
ZNF260-201ENST00000520608 AFF2P51816 1311 aa12.8□□□□□ -0.36
ZNF260-201ENST00000520608 PTCH1Q13635 1447 aa12.79□□□□□ -0.36
ZNF260-201ENST00000520608 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
ZNF260-201ENST00000520608 ROBO2Q9HCK4 1378 aa12.79□□□□□ -0.36
ZNF260-201ENST00000520608 C1orf167Q5SNV9 1468 aa12.78□□□□□ -0.36
ZNF260-201ENST00000520608 CLEC11AQ9Y240 323 aa12.78□□□□□ -0.36
ZNF260-201ENST00000520608 PNPLA6Q8IY17 1366 aa12.78□□□□□ -0.36
ZNF260-201ENST00000520608 LHX8Q68G74 356 aa12.77□□□□□ -0.37
ZNF260-201ENST00000520608 RPGRIP1LQ68CZ1 1315 aa12.77□□□□□ -0.37
ZNF260-201ENST00000520608 PPLO60437 1756 aa12.76□□□□□ -0.37
ZNF260-201ENST00000520608 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
ZNF260-201ENST00000520608 SPDYE1Q8NFV5 336 aaPredicted RBP12.76□□□□□ -0.37
ZNF260-201ENST00000520608 ADAMTS2O95450 1211 aa12.75□□□□□ -0.37
ZNF260-201ENST00000520608 UPF1Q92900 1129 aaKnown RBP eCLIP12.75□□□□□ -0.37
ZNF260-201ENST00000520608 ORAI2Q96SN7 254 aa12.75□□□□□ -0.37
ZNF260-201ENST00000520608 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
ZNF260-201ENST00000520608 CCDC144AA2RUR9 1427 aa12.73□□□□□ -0.37
ZNF260-201ENST00000520608 NGLY1Q96IV0 654 aa12.73□□□□□ -0.37
ZNF260-201ENST00000520608 QTRT2Q9H974 415 aaKnown RBP12.73□□□□□ -0.37
ZNF260-201ENST00000520608 PRAG1Q86YV5 1406 aa12.72□□□□□ -0.37
ZNF260-201ENST00000520608 GABBR2O75899 941 aa12.72□□□□□ -0.37
ZNF260-201ENST00000520608 RGL3Q3MIN7 710 aa12.72□□□□□ -0.37
ZNF260-201ENST00000520608 LAMC1P11047 1609 aa12.72□□□□□ -0.37
ZNF260-201ENST00000520608 RGS12O14924 1447 aa12.71□□□□□ -0.37
ZNF260-201ENST00000520608 SOS2Q07890 1332 aaPredicted RBP12.71□□□□□ -0.37
ZNF260-201ENST00000520608 RBM6P78332 1123 aaKnown RBP12.71□□□□□ -0.37
ZNF260-201ENST00000520608 STK26Q9P289 416 aa12.71□□□□□ -0.37
ZNF260-201ENST00000520608 ADGRF5Q8IZF2 1346 aa12.7□□□□□ -0.38
ZNF260-201ENST00000520608 CDC42BPGQ6DT37 1551 aa12.7□□□□□ -0.38
ZNF260-201ENST00000520608 ESCO1Q5FWF5 840 aa12.7□□□□□ -0.38
ZNF260-201ENST00000520608 NPHP3Q7Z494 1330 aa12.68□□□□□ -0.38
ZNF260-201ENST00000520608 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
ZNF260-201ENST00000520608 USP21Q9UK80 565 aa12.68□□□□□ -0.38
ZNF260-201ENST00000520608 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
ZNF260-201ENST00000520608 COL22A1Q8NFW1 1626 aaPredicted RBP12.67□□□□□ -0.38
ZNF260-201ENST00000520608 XPCQ01831 940 aaPredicted RBP12.67□□□□□ -0.38
ZNF260-201ENST00000520608 MKRN4PQ13434 485 aaPredicted RBP12.67□□□□□ -0.38
ZNF260-201ENST00000520608 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
ZNF260-201ENST00000520608 MPHOSPH9Q99550 1183 aa12.67□□□□□ -0.38
ZNF260-201ENST00000520608 SPATA31E1Q6ZUB1 1445 aa12.67□□□□□ -0.38
ZNF260-201ENST00000520608 IFT172Q9UG01 1749 aa12.67□□□□□ -0.38
ZNF260-201ENST00000520608 FOXO3O43524 673 aa12.66□□□□□ -0.38
ZNF260-201ENST00000520608 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
ZNF260-201ENST00000520608 LRPPRCP42704 1394 aaKnown RBP12.66□□□□□ -0.38
ZNF260-201ENST00000520608 PXDNQ92626 1479 aa12.65□□□□□ -0.38
ZNF260-201ENST00000520608 TECPR2O15040 1411 aa12.65□□□□□ -0.38
ZNF260-201ENST00000520608 PIK3C2GO75747 1445 aa12.65□□□□□ -0.38
ZNF260-201ENST00000520608 TRPC5Q9UL62 973 aaPredicted RBP12.65□□□□□ -0.38
ZNF260-201ENST00000520608 PLEKHH1Q9ULM0 1364 aa12.65□□□□□ -0.38
ZNF260-201ENST00000520608 MYOM2P54296 1465 aa12.65□□□□□ -0.38
ZNF260-201ENST00000520608 KNDC1Q76NI1 1749 aa12.64□□□□□ -0.39
ZNF260-201ENST00000520608 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
ZNF260-201ENST00000520608 ATAD2Q6PL18 1390 aa12.63□□□□□ -0.39
ZNF260-201ENST00000520608 ABCC11Q96J66 1382 aa12.63□□□□□ -0.39
ZNF260-201ENST00000520608 ATRNO75882 1429 aa12.62□□□□□ -0.39
ZNF260-201ENST00000520608 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
ZNF260-201ENST00000520608 FMN2Q9NZ56 1722 aa12.62□□□□□ -0.39
ZNF260-201ENST00000520608 KIF1AQ12756 1690 aa12.61□□□□□ -0.39
ZNF260-201ENST00000520608 MARF1Q9Y4F3 1742 aaKnown RBP12.6□□□□□ -0.39
ZNF260-201ENST00000520608 BCL9LQ86UU0 1499 aa12.59□□□□□ -0.39
ZNF260-201ENST00000520608 PLEKHG5O94827 1062 aa12.59□□□□□ -0.39
ZNF260-201ENST00000520608 HAP1P54257 671 aaPredicted RBP12.59□□□□□ -0.39
ZNF260-201ENST00000520608 SAFB2Q14151 953 aaKnown RBP eCLIP12.59□□□□□ -0.39
ZNF260-201ENST00000520608 DHX57Q6P158 1386 aaKnown RBP12.58□□□□□ -0.4
ZNF260-201ENST00000520608 CFAP70Q5T0N1 1121 aa12.58□□□□□ -0.4
ZNF260-201ENST00000520608 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
ZNF260-201ENST00000520608 SPATA31A3Q5VYP0 1347 aa12.58□□□□□ -0.4
ZNF260-201ENST00000520608 KRT28Q7Z3Y7 464 aa12.57□□□□□ -0.4
ZNF260-201ENST00000520608 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
ZNF260-201ENST00000520608 ACIN1Q9UKV3 1341 aaKnown RBP12.57□□□□□ -0.4
ZNF260-201ENST00000520608 LMOD2Q6P5Q4 547 aa12.56□□□□□ -0.4
ZNF260-201ENST00000520608 GJD4Q96KN9 370 aaPredicted RBP12.56□□□□□ -0.4
ZNF260-201ENST00000520608 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
ZNF260-201ENST00000520608 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
ZNF260-201ENST00000520608 NRXN1Q9ULB1 1477 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms