RNA–Protein interactions for RNA: ENST00000520427.1

SRA1-202, Transcript of steroid receptor RNA activator 1, humanhuman

TSL 1 (best)

Gene SRA1, Length 978 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRA1-202ENST00000520427 USP32Q8NFA0 1604 aa22.01■■□□□ 1.11
SRA1-202ENST00000520427 SIRT1Q96EB6 747 aa21.99■■□□□ 1.11
SRA1-202ENST00000520427 CARD11Q9BXL7 1154 aa21.99■■□□□ 1.11
SRA1-202ENST00000520427 TULP4Q9NRJ4 1543 aa21.98■■□□□ 1.11
SRA1-202ENST00000520427 MSH6P52701 1360 aa21.96■■□□□ 1.11
SRA1-202ENST00000520427 DCCP43146 1447 aa21.96■■□□□ 1.11
SRA1-202ENST00000520427 MINK1Q8N4C8 1332 aaPredicted RBP21.94■■□□□ 1.1
SRA1-202ENST00000520427 USP47Q96K76 1375 aa21.94■■□□□ 1.1
SRA1-202ENST00000520427 MST1RQ04912 1400 aa21.94■■□□□ 1.1
SRA1-202ENST00000520427 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
SRA1-202ENST00000520427 TOPAZ1Q8N9V7 1692 aa21.93■■□□□ 1.1
SRA1-202ENST00000520427 HIRIP3Q9BW71 556 aaPredicted RBP21.93■■□□□ 1.1
SRA1-202ENST00000520427 CENPJQ9HC77 1338 aaPredicted RBP21.93■■□□□ 1.1
SRA1-202ENST00000520427 POGKQ9P215 609 aa21.93■■□□□ 1.1
SRA1-202ENST00000520427 C14orf37Q86TY3 774 aa21.92■■□□□ 1.1
SRA1-202ENST00000520427 C19orf44Q9H6X5 657 aa21.91■■□□□ 1.1
SRA1-202ENST00000520427 EIF3AQ14152 1382 aaKnown RBP21.88■■□□□ 1.09
SRA1-202ENST00000520427 ITSN1Q15811 1721 aa21.87■■□□□ 1.09
SRA1-202ENST00000520427 UBAP1LF5GYI3 381 aa21.87■■□□□ 1.09
SRA1-202ENST00000520427 ATP7BP35670 1465 aa21.87■■□□□ 1.09
SRA1-202ENST00000520427 C1orf167Q5SNV9 1468 aa21.87■■□□□ 1.09
SRA1-202ENST00000520427 SBNO2Q9Y2G9 1366 aa21.87■■□□□ 1.09
SRA1-202ENST00000520427 NHSL1Q5SYE7 1610 aa21.86■■□□□ 1.09
SRA1-202ENST00000520427 PRR36Q9H6K5 1346 aa21.85■■□□□ 1.09
SRA1-202ENST00000520427 ST20-MTHFSA0A0A6YYL1 179 aa21.85■■□□□ 1.09
SRA1-202ENST00000520427 TESK2Q96S53 571 aa21.85■■□□□ 1.09
SRA1-202ENST00000520427 NUTM2FA1L443 756 aa21.84■■□□□ 1.09
SRA1-202ENST00000520427 ATF3P18847 181 aa21.83■■□□□ 1.09
SRA1-202ENST00000520427 CADPS2Q86UW7 1296 aa21.83■■□□□ 1.09
SRA1-202ENST00000520427 MYOM1P52179 1685 aa21.82■■□□□ 1.08
SRA1-202ENST00000520427 WASLO00401 505 aaPredicted RBP21.81■■□□□ 1.08
SRA1-202ENST00000520427 HSPA5P11021 654 aaKnown RBP21.81■■□□□ 1.08
SRA1-202ENST00000520427 KIF1AQ12756 1690 aa21.81■■□□□ 1.08
SRA1-202ENST00000520427 DISP3Q9P2K9 1392 aa21.8■■□□□ 1.08
SRA1-202ENST00000520427 PIP4K2BP78356 416 aa21.8■■□□□ 1.08
SRA1-202ENST00000520427 SLAIN2Q9P270 581 aa21.8■■□□□ 1.08
SRA1-202ENST00000520427 ANKARQ7Z5J8 1434 aa21.8■■□□□ 1.08
SRA1-202ENST00000520427 PHLPP1O60346 1717 aa21.78■■□□□ 1.08
SRA1-202ENST00000520427 AHDC1Q5TGY3 1603 aaPredicted RBP21.78■■□□□ 1.08
SRA1-202ENST00000520427 TOM1O60784 492 aa21.78■■□□□ 1.08
SRA1-202ENST00000520427 CDK19Q9BWU1 502 aa21.78■■□□□ 1.08
SRA1-202ENST00000520427 BRINP3Q76B58 766 aa21.77■■□□□ 1.08
SRA1-202ENST00000520427 ORAI2Q96SN7 254 aa21.77■■□□□ 1.08
SRA1-202ENST00000520427 COL16A1Q07092 1604 aaPredicted RBP21.77■■□□□ 1.07
SRA1-202ENST00000520427 AKAP12Q02952 1782 aa21.76■■□□□ 1.07
SRA1-202ENST00000520427 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
SRA1-202ENST00000520427 CABP2Q9NPB3 220 aa21.75■■□□□ 1.07
SRA1-202ENST00000520427 EIF4G2P78344 907 aaKnown RBP eCLIP21.74■■□□□ 1.07
SRA1-202ENST00000520427 TRPM3Q9HCF6 1732 aaPredicted RBP21.74■■□□□ 1.07
SRA1-202ENST00000520427 SCAF1Q9H7N4 1312 aaKnown RBP21.74■■□□□ 1.07
SRA1-202ENST00000520427 DDX17Q92841 729 aaKnown RBP21.73■■□□□ 1.07
SRA1-202ENST00000520427 EVC2Q86UK5 1308 aa21.72■■□□□ 1.07
SRA1-202ENST00000520427 NUDT16Q96DE0 195 aaKnown RBP21.71■■□□□ 1.07
SRA1-202ENST00000520427 MON2Q7Z3U7 1717 aa21.71■■□□□ 1.07
SRA1-202ENST00000520427 PXDNQ92626 1479 aa21.71■■□□□ 1.07
SRA1-202ENST00000520427 NRKQ7Z2Y5 1582 aa21.7■■□□□ 1.06
SRA1-202ENST00000520427 C11orf95C9JLR9 678 aaPredicted RBP21.69■■□□□ 1.06
SRA1-202ENST00000520427 ZEB1P37275 1124 aaPredicted RBP21.69■■□□□ 1.06
SRA1-202ENST00000520427 SRPK2P78362 688 aaKnown RBP21.69■■□□□ 1.06
SRA1-202ENST00000520427 ESCO1Q5FWF5 840 aa21.69■■□□□ 1.06
SRA1-202ENST00000520427 PPIP5K1Q6PFW1 1433 aa21.69■■□□□ 1.06
SRA1-202ENST00000520427 CD163L1Q9NR16 1453 aa21.68■■□□□ 1.06
SRA1-202ENST00000520427 PMFBP1Q8TBY8 1022 aa21.66■■□□□ 1.06
SRA1-202ENST00000520427 ALS2Q96Q42 1657 aa21.66■■□□□ 1.06
SRA1-202ENST00000520427 PHF8Q9UPP1 1060 aa21.65■■□□□ 1.06
SRA1-202ENST00000520427 HSPA1LP34931 641 aa21.64■■□□□ 1.05
SRA1-202ENST00000520427 POLR3AO14802 1390 aaPredicted RBP21.63■■□□□ 1.05
SRA1-202ENST00000520427 ATAD2Q6PL18 1390 aa21.63■■□□□ 1.05
SRA1-202ENST00000520427 XPCQ01831 940 aaPredicted RBP21.63■■□□□ 1.05
SRA1-202ENST00000520427 ILDR1Q86SU0 546 aaPredicted RBP21.63■■□□□ 1.05
SRA1-202ENST00000520427 MARF1Q9Y4F3 1742 aaKnown RBP21.63■■□□□ 1.05
SRA1-202ENST00000520427 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
SRA1-202ENST00000520427 FOXO3O43524 673 aa21.62■■□□□ 1.05
SRA1-202ENST00000520427 TMF1P82094 1093 aa21.62■■□□□ 1.05
SRA1-202ENST00000520427 CCDC61Q9Y6R9 512 aa21.62■■□□□ 1.05
SRA1-202ENST00000520427 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
SRA1-202ENST00000520427 CRYBG1Q9Y4K1 1723 aa21.62■■□□□ 1.05
SRA1-202ENST00000520427 PLEKHG3A1L390 1219 aa21.6■■□□□ 1.05
SRA1-202ENST00000520427 CABP1Q9NZU7 370 aa21.6■■□□□ 1.05
SRA1-202ENST00000520427 ACEP12821 1306 aa21.59■■□□□ 1.05
SRA1-202ENST00000520427 SOS2Q07890 1332 aaPredicted RBP21.59■■□□□ 1.05
SRA1-202ENST00000520427 PIK3C2AO00443 1686 aa21.59■■□□□ 1.05
SRA1-202ENST00000520427 CPSF1Q10570 1443 aaKnown RBP21.58■■□□□ 1.05
SRA1-202ENST00000520427 COL22A1Q8NFW1 1626 aaPredicted RBP21.58■■□□□ 1.04
SRA1-202ENST00000520427 KIF7Q2M1P5 1343 aa21.57■■□□□ 1.04
SRA1-202ENST00000520427 PUS7Q96PZ0 661 aaKnown RBP21.57■■□□□ 1.04
SRA1-202ENST00000520427 SLC12A5Q9H2X9 1139 aa21.57■■□□□ 1.04
SRA1-202ENST00000520427 NPHP3Q7Z494 1330 aa21.56■■□□□ 1.04
SRA1-202ENST00000520427 USP6P35125 1406 aa21.55■■□□□ 1.04
SRA1-202ENST00000520427 SSH2Q76I76 1423 aa21.55■■□□□ 1.04
SRA1-202ENST00000520427 A0A1W2PP64 1363 aa21.55■■□□□ 1.04
SRA1-202ENST00000520427 CCDC7Q96M83 1385 aa21.54■■□□□ 1.04
SRA1-202ENST00000520427 WASHC2AQ641Q2 1341 aa21.54■■□□□ 1.04
SRA1-202ENST00000520427 KIF20BQ96Q89 1820 aa21.53■■□□□ 1.04
SRA1-202ENST00000520427 KRT28Q7Z3Y7 464 aa21.53■■□□□ 1.04
SRA1-202ENST00000520427 NGDNQ8NEJ9 315 aaKnown RBP21.53■■□□□ 1.04
SRA1-202ENST00000520427 PHRF1Q9P1Y6 1649 aaKnown RBP21.53■■□□□ 1.04
SRA1-202ENST00000520427 TNS3Q68CZ2 1445 aa21.53■■□□□ 1.04
SRA1-202ENST00000520427 TMC1Q8TDI8 760 aa21.52■■□□□ 1.04
SRA1-202ENST00000520427 USP54Q70EL1 1684 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms