RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 PRKRIP1Q9H875 184 aaPredicted RBP19.92■□□□□ 0.78
CLN8-204ENST00000519254 PIK3R4Q99570 1358 aa19.91■□□□□ 0.78
CLN8-204ENST00000519254 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
CLN8-204ENST00000519254 FAM135BQ49AJ0 1406 aa19.9■□□□□ 0.78
CLN8-204ENST00000519254 SLC24A1O60721 1099 aa19.9■□□□□ 0.78
CLN8-204ENST00000519254 STRCQ7RTU9 1775 aa19.9■□□□□ 0.78
CLN8-204ENST00000519254 KCNA6P17658 529 aa19.89■□□□□ 0.77
CLN8-204ENST00000519254 CDCA8Q53HL2 280 aa19.89■□□□□ 0.77
CLN8-204ENST00000519254 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
CLN8-204ENST00000519254 CHD2O14647 1828 aaKnown RBP19.88■□□□□ 0.77
CLN8-204ENST00000519254 EVC2Q86UK5 1308 aa19.88■□□□□ 0.77
CLN8-204ENST00000519254 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
CLN8-204ENST00000519254 SIRT1Q96EB6 747 aa19.87■□□□□ 0.77
CLN8-204ENST00000519254 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
CLN8-204ENST00000519254 CABP2Q9NPB3 220 aa19.83■□□□□ 0.77
CLN8-204ENST00000519254 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
CLN8-204ENST00000519254 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.82■□□□□ 0.76
CLN8-204ENST00000519254 CCDC184Q52MB2 194 aa19.82■□□□□ 0.76
CLN8-204ENST00000519254 MYOM1P52179 1685 aa19.82■□□□□ 0.76
CLN8-204ENST00000519254 CDK19Q9BWU1 502 aa19.81■□□□□ 0.76
CLN8-204ENST00000519254 NWD1Q149M9 1564 aa19.81■□□□□ 0.76
CLN8-204ENST00000519254 RBM33Q96EV2 1170 aaKnown RBP19.8■□□□□ 0.76
CLN8-204ENST00000519254 TMC1Q8TDI8 760 aa19.79■□□□□ 0.76
CLN8-204ENST00000519254 WASLO00401 505 aaPredicted RBP19.78■□□□□ 0.76
CLN8-204ENST00000519254 ADGRB2O60241 1585 aa19.77■□□□□ 0.76
CLN8-204ENST00000519254 PER1O15534 1290 aaPredicted RBP19.77■□□□□ 0.76
CLN8-204ENST00000519254 PANK3Q9H999 370 aa19.76■□□□□ 0.75
CLN8-204ENST00000519254 STRCP1A6NGW2 1772 aa19.76■□□□□ 0.75
CLN8-204ENST00000519254 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
CLN8-204ENST00000519254 CNGB1Q14028 1251 aaPredicted RBP19.75■□□□□ 0.75
CLN8-204ENST00000519254 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
CLN8-204ENST00000519254 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
CLN8-204ENST00000519254 NKTRP30414 1462 aaKnown RBP19.75■□□□□ 0.75
CLN8-204ENST00000519254 NALCNQ8IZF0 1738 aa19.74■□□□□ 0.75
CLN8-204ENST00000519254 PUS7Q96PZ0 661 aaKnown RBP19.74■□□□□ 0.75
CLN8-204ENST00000519254 SLC12A5Q9H2X9 1139 aa19.74■□□□□ 0.75
CLN8-204ENST00000519254 NUTM2FA1L443 756 aa19.73■□□□□ 0.75
CLN8-204ENST00000519254 MRS2Q9HD23 443 aa19.72■□□□□ 0.75
CLN8-204ENST00000519254 DMRT2Q9Y5R5 561 aa19.72■□□□□ 0.75
CLN8-204ENST00000519254 KTN1Q86UP2 1357 aaKnown RBP19.72■□□□□ 0.75
CLN8-204ENST00000519254 ZNF335Q9H4Z2 1342 aaPredicted RBP19.71■□□□□ 0.75
CLN8-204ENST00000519254 GTF3C3Q9Y5Q9 886 aa19.71■□□□□ 0.75
CLN8-204ENST00000519254 ADGRL3Q9HAR2 1447 aa19.7■□□□□ 0.74
CLN8-204ENST00000519254 NUDT16Q96DE0 195 aaKnown RBP19.7■□□□□ 0.74
CLN8-204ENST00000519254 RALBP1Q15311 655 aa19.69■□□□□ 0.74
CLN8-204ENST00000519254 ATP7BP35670 1465 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 CABP1Q9NZU7 370 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 PRR36Q9H6K5 1346 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 PARD3Q8TEW0 1356 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 NINLQ9Y2I6 1382 aa19.68■□□□□ 0.74
CLN8-204ENST00000519254 PPIP5K1Q6PFW1 1433 aa19.67■□□□□ 0.74
CLN8-204ENST00000519254 CDC42BPGQ6DT37 1551 aa19.67■□□□□ 0.74
CLN8-204ENST00000519254 KNSTRNQ9Y448 316 aa19.66■□□□□ 0.74
CLN8-204ENST00000519254 FMN2Q9NZ56 1722 aa19.65■□□□□ 0.74
CLN8-204ENST00000519254 MYBBP1AQ9BQG0 1328 aaKnown RBP19.65■□□□□ 0.74
CLN8-204ENST00000519254 ANKRD36BQ8N2N9 1353 aa19.65■□□□□ 0.74
CLN8-204ENST00000519254 USP32Q8NFA0 1604 aa19.65■□□□□ 0.74
CLN8-204ENST00000519254 CARD14Q9BXL6 1004 aa19.65■□□□□ 0.74
CLN8-204ENST00000519254 CCDC61Q9Y6R9 512 aa19.65■□□□□ 0.74
CLN8-204ENST00000519254 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
CLN8-204ENST00000519254 FAM9BQ8IZU0 186 aa19.64■□□□□ 0.73
CLN8-204ENST00000519254 NSD3Q9BZ95 1437 aa19.63■□□□□ 0.73
CLN8-204ENST00000519254 TERF2IPQ9NYB0 399 aa19.63■□□□□ 0.73
CLN8-204ENST00000519254 TOPAZ1Q8N9V7 1692 aa19.63■□□□□ 0.73
CLN8-204ENST00000519254 CC2D1BQ5T0F9 858 aaKnown RBP19.62■□□□□ 0.73
CLN8-204ENST00000519254 HDGFL2Q7Z4V5 671 aaPredicted RBP19.62■□□□□ 0.73
CLN8-204ENST00000519254 RGPD8O14715 1765 aaPredicted RBP19.62■□□□□ 0.73
CLN8-204ENST00000519254 CD163L1Q9NR16 1453 aa19.62■□□□□ 0.73
CLN8-204ENST00000519254 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.73
CLN8-204ENST00000519254 BRD4O60885 1362 aaPredicted RBP19.61■□□□□ 0.73
CLN8-204ENST00000519254 LRRC7Q96NW7 1537 aa19.61■□□□□ 0.73
CLN8-204ENST00000519254 ITSN1Q15811 1721 aa19.61■□□□□ 0.73
CLN8-204ENST00000519254 C19orf44Q9H6X5 657 aa19.6■□□□□ 0.73
CLN8-204ENST00000519254 ANKARQ7Z5J8 1434 aa19.6■□□□□ 0.73
CLN8-204ENST00000519254 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
CLN8-204ENST00000519254 NCOA3Q9Y6Q9 1424 aa19.58■□□□□ 0.73
CLN8-204ENST00000519254 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.73
CLN8-204ENST00000519254 PMFBP1Q8TBY8 1022 aa19.58■□□□□ 0.73
CLN8-204ENST00000519254 PNISRQ8TF01 805 aaKnown RBP19.58■□□□□ 0.73
CLN8-204ENST00000519254 MSH6P52701 1360 aa19.57■□□□□ 0.72
CLN8-204ENST00000519254 ATF3P18847 181 aa19.57■□□□□ 0.72
CLN8-204ENST00000519254 NLRP13Q86W25 1043 aa19.56■□□□□ 0.72
CLN8-204ENST00000519254 ACEP12821 1306 aa19.55■□□□□ 0.72
CLN8-204ENST00000519254 CPSF1Q10570 1443 aaKnown RBP19.55■□□□□ 0.72
CLN8-204ENST00000519254 AKAP12Q02952 1782 aa19.55■□□□□ 0.72
CLN8-204ENST00000519254 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
CLN8-204ENST00000519254 PLEKHG3A1L390 1219 aa19.55■□□□□ 0.72
CLN8-204ENST00000519254 CGNL1Q0VF96 1302 aa19.54■□□□□ 0.72
CLN8-204ENST00000519254 DCCP43146 1447 aa19.54■□□□□ 0.72
CLN8-204ENST00000519254 ESCO1Q5FWF5 840 aa19.54■□□□□ 0.72
CLN8-204ENST00000519254 NGDNQ8NEJ9 315 aaKnown RBP19.54■□□□□ 0.72
CLN8-204ENST00000519254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.53■□□□□ 0.72
CLN8-204ENST00000519254 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
CLN8-204ENST00000519254 CADPS2Q86UW7 1296 aa19.52■□□□□ 0.71
CLN8-204ENST00000519254 PHF8Q9UPP1 1060 aa19.52■□□□□ 0.71
CLN8-204ENST00000519254 ZNF692Q9BU19 519 aaPredicted RBP19.51■□□□□ 0.71
CLN8-204ENST00000519254 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
CLN8-204ENST00000519254 MST1RQ04912 1400 aa19.51■□□□□ 0.71
CLN8-204ENST00000519254 EDC4Q6P2E9 1401 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms