RNA–Protein interactions for RNA: ENST00000519132.5

CLK4-202, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-202ENST00000519132 CEP164Q9UPV0 1460 aa10.76□□□□□ -0.69
CLK4-202ENST00000519132 C6orf132Q5T0Z8 1188 aa10.75□□□□□ -0.69
CLK4-202ENST00000519132 CHRDL2Q6WN34 429 aa10.75□□□□□ -0.69
CLK4-202ENST00000519132 NDUFB9Q9Y6M9 179 aa10.75□□□□□ -0.69
CLK4-202ENST00000519132 SERPINB4P48594 390 aa10.75□□□□□ -0.69
CLK4-202ENST00000519132 OCEL1Q9H607 264 aa10.75□□□□□ -0.69
CLK4-202ENST00000519132 COLQQ9Y215 455 aaPredicted RBP10.75□□□□□ -0.69
CLK4-202ENST00000519132 CUX1P39880 1505 aa10.74□□□□□ -0.69
CLK4-202ENST00000519132 HSP90B1P14625 803 aaKnown RBP10.74□□□□□ -0.69
CLK4-202ENST00000519132 DNAJC14Q6Y2X3 702 aaPredicted RBP10.74□□□□□ -0.69
CLK4-202ENST00000519132 NUTM1Q86Y26 1132 aa10.73□□□□□ -0.69
CLK4-202ENST00000519132 DNMBPQ6XZF7 1577 aa10.72□□□□□ -0.69
CLK4-202ENST00000519132 SMAPO00193 183 aa10.72□□□□□ -0.69
CLK4-202ENST00000519132 DEPDC4Q8N2C3 294 aa10.72□□□□□ -0.69
CLK4-202ENST00000519132 G3V3G9 751 aa10.72□□□□□ -0.69
CLK4-202ENST00000519132 PUS7Q96PZ0 661 aaKnown RBP10.72□□□□□ -0.69
CLK4-202ENST00000519132 CDCA7LQ96GN5 454 aa10.71□□□□□ -0.69
CLK4-202ENST00000519132 KHSRPQ92945 711 aaKnown RBP eCLIP10.71□□□□□ -0.693e-6■■■■□ 19.5
CLK4-202ENST00000519132 ZNF16P17020 682 aaPredicted RBP10.71□□□□□ -0.7
CLK4-202ENST00000519132 SYMPKQ92797 1274 aaKnown RBP10.71□□□□□ -0.7
CLK4-202ENST00000519132 ADAM33Q9BZ11 813 aa10.71□□□□□ -0.7
CLK4-202ENST00000519132 TTC13Q8NBP0 860 aa10.7□□□□□ -0.7
CLK4-202ENST00000519132 CHMP4AQ9BY43 222 aa10.7□□□□□ -0.7
CLK4-202ENST00000519132 RBM47A0AV96 593 aaKnown RBP10.7□□□□□ -0.7
CLK4-202ENST00000519132 TYW1BQ6NUM6 668 aa10.69□□□□□ -0.7
CLK4-202ENST00000519132 EPAS1Q99814 870 aa10.69□□□□□ -0.7
CLK4-202ENST00000519132 CFAP99D6REC4 459 aa10.68□□□□□ -0.7
CLK4-202ENST00000519132 ATG7O95352 703 aa10.68□□□□□ -0.7
CLK4-202ENST00000519132 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
CLK4-202ENST00000519132 GIPC2Q8TF65 315 aa10.68□□□□□ -0.7
CLK4-202ENST00000519132 URB2Q14146 1524 aaKnown RBP10.67□□□□□ -0.7
CLK4-202ENST00000519132 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
CLK4-202ENST00000519132 NR6A1Q15406 480 aa10.67□□□□□ -0.7
CLK4-202ENST00000519132 MRC2Q9UBG0 1479 aa10.67□□□□□ -0.7
CLK4-202ENST00000519132 PATL2C9JE40 543 aaKnown RBP10.67□□□□□ -0.7
CLK4-202ENST00000519132 COL9A1P20849 921 aa10.67□□□□□ -0.7
CLK4-202ENST00000519132 KANK4Q5T7N3 995 aaPredicted RBP10.67□□□□□ -0.7
CLK4-202ENST00000519132 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
CLK4-202ENST00000519132 DIXDC1Q155Q3 683 aa10.66□□□□□ -0.7
CLK4-202ENST00000519132 THOC2Q8NI27 1593 aaKnown RBP10.66□□□□□ -0.7
CLK4-202ENST00000519132 WDR62O43379 1518 aa10.65□□□□□ -0.7
CLK4-202ENST00000519132 LGR5O75473 907 aa10.65□□□□□ -0.7
CLK4-202ENST00000519132 PDE4CQ08493 712 aa10.65□□□□□ -0.7
CLK4-202ENST00000519132 ZNF454Q8N9F8 522 aa10.65□□□□□ -0.7
CLK4-202ENST00000519132 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
CLK4-202ENST00000519132 GNEQ9Y223 722 aaKnown RBP10.65□□□□□ -0.7
CLK4-202ENST00000519132 EYA1Q99502 592 aa10.65□□□□□ -0.7
CLK4-202ENST00000519132 CRTC2Q53ET0 693 aaPredicted RBP10.64□□□□□ -0.71
CLK4-202ENST00000519132 RSPH4AQ5TD94 716 aa10.64□□□□□ -0.71
CLK4-202ENST00000519132 NUDT18Q6ZVK8 323 aa10.64□□□□□ -0.71
CLK4-202ENST00000519132 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
CLK4-202ENST00000519132 SMARCA5O60264 1052 aaPredicted RBP10.64□□□□□ -0.71
CLK4-202ENST00000519132 PRSS12P56730 875 aa10.64□□□□□ -0.71
CLK4-202ENST00000519132 RDH13Q8NBN7 331 aa10.64□□□□□ -0.71
CLK4-202ENST00000519132 RBM46Q8TBY0 533 aaKnown RBP10.64□□□□□ -0.71
CLK4-202ENST00000519132 FGD5Q6ZNL6 1462 aa10.63□□□□□ -0.71
CLK4-202ENST00000519132 EVX2Q03828 476 aa10.63□□□□□ -0.71
CLK4-202ENST00000519132 ERCC6Q03468 1493 aa10.63□□□□□ -0.71
CLK4-202ENST00000519132 BCL2L13Q9BXK5 485 aa10.63□□□□□ -0.71
CLK4-202ENST00000519132 EEA1Q15075 1411 aa10.63□□□□□ -0.71
CLK4-202ENST00000519132 ATMINO43313 823 aaPredicted RBP10.62□□□□□ -0.71
CLK4-202ENST00000519132 FOSBP53539 338 aa10.62□□□□□ -0.71
CLK4-202ENST00000519132 WASHC4Q2M389 1173 aa10.62□□□□□ -0.71
CLK4-202ENST00000519132 PCDHGA4Q9Y5G9 962 aa10.62□□□□□ -0.71
CLK4-202ENST00000519132 KDM4AO75164 1064 aa10.62□□□□□ -0.71
CLK4-202ENST00000519132 PLCG2P16885 1265 aa10.62□□□□□ -0.71
CLK4-202ENST00000519132 KDM4FA0A1W2PPD8 638 aa10.61□□□□□ -0.71
CLK4-202ENST00000519132 HOXA2O43364 376 aa10.61□□□□□ -0.71
CLK4-202ENST00000519132 POLA1P09884 1462 aaPredicted RBP10.61□□□□□ -0.71
CLK4-202ENST00000519132 FDX1P10109 184 aa10.61□□□□□ -0.71
CLK4-202ENST00000519132 WDR97A6NE52 1622 aa10.61□□□□□ -0.71
CLK4-202ENST00000519132 JPH4Q96JJ6 628 aa10.61□□□□□ -0.71
CLK4-202ENST00000519132 ZBTB3Q9H5J0 574 aa10.6□□□□□ -0.71
CLK4-202ENST00000519132 ANO2Q9NQ90 1003 aa10.6□□□□□ -0.71
CLK4-202ENST00000519132 NOVA2Q9UNW9 492 aaKnown RBP10.6□□□□□ -0.71
CLK4-202ENST00000519132 UBE2Q2Q8WVN8 375 aa10.59□□□□□ -0.71
CLK4-202ENST00000519132 POTEFA5A3E0 1075 aa10.59□□□□□ -0.71
CLK4-202ENST00000519132 L3MBTL3Q96JM7 780 aaPredicted RBP10.59□□□□□ -0.71
CLK4-202ENST00000519132 NUDT7P0C024 238 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 TUSC1Q2TAM9 212 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 TCF3P15923 654 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 FAM174AQ8TBP5 190 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 SEMA3FQ13275 785 aa10.58□□□□□ -0.72
CLK4-202ENST00000519132 TARBP1Q13395 1621 aaKnown RBP10.57□□□□□ -0.72
CLK4-202ENST00000519132 SOGA1O94964 1423 aa10.57□□□□□ -0.72
CLK4-202ENST00000519132 C19orf67A6NJJ6 358 aa10.57□□□□□ -0.72
CLK4-202ENST00000519132 ATP9BO43861 1147 aa10.57□□□□□ -0.72
CLK4-202ENST00000519132 ZDHHC16Q969W1 377 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 ANKRD33BA6NCL7 494 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 SOCS7O14512 581 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 PPM1GO15355 546 aaPredicted RBP10.56□□□□□ -0.72
CLK4-202ENST00000519132 SSFA2P28290 1259 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 C9orf131Q5VYM1 1079 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 TMEM134Q9H6X4 195 aa10.56□□□□□ -0.72
CLK4-202ENST00000519132 GAS2L2Q8NHY3 880 aa10.55□□□□□ -0.72
CLK4-202ENST00000519132 BIN2Q9UBW5 565 aaPredicted RBP10.55□□□□□ -0.72
CLK4-202ENST00000519132 SLC10A3P09131 477 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms