RNA–Protein interactions for RNA: ENST00000518960.5

MSR1-209, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 3

Gene MSR1, Length 353 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-209ENST00000518960 ZNF516Q92618 1163 aa4.62□□□□□ -1.67
MSR1-209ENST00000518960 TMUB1Q9BVT8 246 aa4.62□□□□□ -1.67
MSR1-209ENST00000518960 SLC24A3Q9HC58 644 aa4.62□□□□□ -1.67
MSR1-209ENST00000518960 WDR62O43379 1518 aa4.62□□□□□ -1.67
MSR1-209ENST00000518960 A0A0G2JS52 829 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 FMNL1O95466 1100 aaPredicted RBP4.61□□□□□ -1.67
MSR1-209ENST00000518960 Q3C1V9 767 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 BLOC1S3Q6QNY0 202 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.61□□□□□ -1.67
MSR1-209ENST00000518960 FAM217BQ9NTX9 383 aaPredicted RBP4.61□□□□□ -1.67
MSR1-209ENST00000518960 SALL2Q9Y467 1007 aaPredicted RBP4.61□□□□□ -1.67
MSR1-209ENST00000518960 FGD5Q6ZNL6 1462 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 TOP2BQ02880 1626 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 BIVM-ERCC5R4GMW8 1640 aa4.61□□□□□ -1.67
MSR1-209ENST00000518960 PDE4DQ08499 809 aa4.6□□□□□ -1.67
MSR1-209ENST00000518960 FUT2Q10981 343 aa4.6□□□□□ -1.67
MSR1-209ENST00000518960 PUS10Q3MIT2 529 aaKnown RBP4.6□□□□□ -1.67
MSR1-209ENST00000518960 POLA1P09884 1462 aaPredicted RBP4.59□□□□□ -1.67
MSR1-209ENST00000518960 MORN1Q5T089 497 aa4.59□□□□□ -1.67
MSR1-209ENST00000518960 PPP1R18Q6NYC8 613 aa4.59□□□□□ -1.67
MSR1-209ENST00000518960 SPSB2Q99619 263 aa4.59□□□□□ -1.67
MSR1-209ENST00000518960 RAD54L2Q9Y4B4 1467 aa4.59□□□□□ -1.67
MSR1-209ENST00000518960 GIGYF2Q6Y7W6 1299 aaKnown RBP4.58□□□□□ -1.68
MSR1-209ENST00000518960 NKX2-3Q8TAU0 364 aa4.58□□□□□ -1.68
MSR1-209ENST00000518960 BEGAINQ9BUH8 593 aa4.58□□□□□ -1.68
MSR1-209ENST00000518960 RSPH6AQ9H0K4 717 aa4.58□□□□□ -1.68
MSR1-209ENST00000518960 SLC27A5Q9Y2P5 690 aa4.58□□□□□ -1.68
MSR1-209ENST00000518960 CUX2O14529 1486 aa4.57□□□□□ -1.68
MSR1-209ENST00000518960 ADH1BP00325 375 aa4.57□□□□□ -1.68
MSR1-209ENST00000518960 REPIN1Q9BWE0 567 aaKnown RBP4.57□□□□□ -1.68
MSR1-209ENST00000518960 SLC6A16Q9GZN6 736 aa4.57□□□□□ -1.68
MSR1-209ENST00000518960 SOGA1O94964 1423 aa4.56□□□□□ -1.68
MSR1-209ENST00000518960 BRICD5Q6PL45 260 aa4.56□□□□□ -1.68
MSR1-209ENST00000518960 PARP9Q8IXQ6 854 aa4.56□□□□□ -1.68
MSR1-209ENST00000518960 FAM9AQ8IZU1 332 aaPredicted RBP4.56□□□□□ -1.68
MSR1-209ENST00000518960 IRX2Q9BZI1 471 aaPredicted RBP4.56□□□□□ -1.68
MSR1-209ENST00000518960 WDR97A6NE52 1622 aa4.56□□□□□ -1.68
MSR1-209ENST00000518960 ZNF608Q9ULD9 1512 aaPredicted RBP4.56□□□□□ -1.68
MSR1-209ENST00000518960 IFT140Q96RY7 1462 aa4.56□□□□□ -1.68
MSR1-209ENST00000518960 TARBP1Q13395 1621 aaKnown RBP4.55□□□□□ -1.68
MSR1-209ENST00000518960 SPDYE5A6NIY4 337 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 HOXA2O43364 376 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 FDX1P10109 184 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 GJA5P36382 358 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 ANKLE1Q8NAG6 615 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 SPIRE2Q8WWL2 714 aa4.55□□□□□ -1.68
MSR1-209ENST00000518960 USB1Q9BQ65 265 aaKnown RBP4.55□□□□□ -1.68
MSR1-209ENST00000518960 V9GY48 417 aaPredicted RBP4.55□□□□□ -1.68
MSR1-209ENST00000518960 TDRD9Q8NDG6 1382 aaKnown RBP4.54□□□□□ -1.68
MSR1-209ENST00000518960 EIF4G3O43432 1585 aaKnown RBP4.54□□□□□ -1.68
MSR1-209ENST00000518960 ZBTB24O43167 697 aaPredicted RBP4.54□□□□□ -1.68
MSR1-209ENST00000518960 CD2BP2O95400 341 aaKnown RBP4.54□□□□□ -1.68
MSR1-209ENST00000518960 TPRNQ4KMQ1 711 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 THAP11Q96EK4 314 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 TBC1D2Q9BYX2 928 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 PRKD2Q9BZL6 878 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 ATP1B4Q9UN42 357 aaPredicted RBP4.54□□□□□ -1.68
MSR1-209ENST00000518960 RUSC2Q8N2Y8 1516 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 ABCA10Q8WWZ4 1543 aa4.54□□□□□ -1.68
MSR1-209ENST00000518960 AQRO60306 1485 aaKnown RBP eCLIP4.54□□□□□ -1.68
MSR1-209ENST00000518960 RNF223E7ERA6 249 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 C6orf229H3BNL8 230 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 S1PR4O95977 384 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 SLC19A1P41440 591 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 MSS51Q4VC12 460 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 DDRGK1Q96HY6 314 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 PBRM1Q86U86 1689 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 ABCA5Q8WWZ7 1642 aa4.53□□□□□ -1.68
MSR1-209ENST00000518960 GAPVD1Q14C86 1478 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 MOXD2PA6NHM9 499 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 MS4A1P11836 297 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 NDUFV2P19404 249 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 RIC3Q7Z5B4 369 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 RETREG3Q86VR2 466 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 FAM160A2Q8N612 972 aaPredicted RBP4.52□□□□□ -1.69
MSR1-209ENST00000518960 KIF27Q86VH2 1401 aa4.52□□□□□ -1.69
MSR1-209ENST00000518960 SNAPC4Q5SXM2 1469 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 NUTM2BA6NNL0 878 aaPredicted RBP4.51□□□□□ -1.69
MSR1-209ENST00000518960 NUTM2EB1AL46 878 aaPredicted RBP4.51□□□□□ -1.69
MSR1-209ENST00000518960 PPEF1O14829 653 aaPredicted RBP4.51□□□□□ -1.69
MSR1-209ENST00000518960 SPTLC1O15269 473 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 TLL1O43897 1013 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 MTMR2Q13614 643 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 LAPTM4AQ15012 233 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 NUTM2DQ5VT03 806 aaPredicted RBP4.51□□□□□ -1.69
MSR1-209ENST00000518960 RNF19BQ6ZMZ0 732 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 NUTM2AQ8IVF1 878 aaPredicted RBP4.51□□□□□ -1.69
MSR1-209ENST00000518960 KDM4CQ9H3R0 1056 aa4.51□□□□□ -1.69
MSR1-209ENST00000518960 GRIN2BQ13224 1484 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 RPIAP49247 311 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 MMP16P51512 607 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 NEUROD2Q15784 382 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 TUSC1Q2TAM9 212 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 PRPF38BQ5VTL8 546 aaKnown RBP4.5□□□□□ -1.69
MSR1-209ENST00000518960 RSBN1LQ6PCB5 846 aaPredicted RBP4.5□□□□□ -1.69
MSR1-209ENST00000518960 ZBTB3Q9H5J0 574 aa4.5□□□□□ -1.69
MSR1-209ENST00000518960 ADAMTS12P58397 1594 aa4.49□□□□□ -1.69
MSR1-209ENST00000518960 GUCA2AQ02747 115 aa4.49□□□□□ -1.69
MSR1-209ENST00000518960 SKIV2LQ15477 1246 aaKnown RBP4.49□□□□□ -1.69
MSR1-209ENST00000518960 SPRYD7Q5W111 196 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms