RNA–Protein interactions for RNA: ENST00000518930.1

PCM1-209, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-209	ENST00000518930	SAFB2	Q14151	953 aa	Known RBP eCLIP	34.33	■■■■□ 3.09
PCM1-209	ENST00000518930	QRICH2	Q9H0J4	1663 aa		34.33	■■■■□ 3.09
PCM1-209	ENST00000518930	CENPJ	Q9HC77	1338 aa	Predicted RBP	34.3	■■■■□ 3.08
PCM1-209	ENST00000518930	C19orf44	Q9H6X5	657 aa		34.3	■■■■□ 3.08
PCM1-209	ENST00000518930	DCC	P43146	1447 aa		34.3	■■■■□ 3.08
PCM1-209	ENST00000518930	CDC42BPG	Q6DT37	1551 aa		34.29	■■■■□ 3.08
PCM1-209	ENST00000518930	ADGRB2	O60241	1585 aa		34.28	■■■■□ 3.08
PCM1-209	ENST00000518930	ZEB1	P37275	1124 aa	Predicted RBP	34.27	■■■■□ 3.08
PCM1-209	ENST00000518930	USP47	Q96K76	1375 aa		34.25	■■■■□ 3.07
PCM1-209	ENST00000518930	ATF3	P18847	181 aa		34.25	■■■■□ 3.07
PCM1-209	ENST00000518930	MINK1	Q8N4C8	1332 aa	Predicted RBP	34.24	■■■■□ 3.07
PCM1-209	ENST00000518930	CADPS2	Q86UW7	1296 aa		34.22	■■■■□ 3.07
PCM1-209	ENST00000518930	TOM1	O60784	492 aa		34.19	■■■■□ 3.06
PCM1-209	ENST00000518930	FMN2	Q9NZ56	1722 aa		34.18	■■■■□ 3.06
PCM1-209	ENST00000518930	UBAP1L	F5GYI3	381 aa		34.18	■■■■□ 3.06
PCM1-209	ENST00000518930	HIRIP3	Q9BW71	556 aa	Predicted RBP	34.18	■■■■□ 3.06
PCM1-209	ENST00000518930	SBNO2	Q9Y2G9	1366 aa		34.14	■■■■□ 3.06
PCM1-209	ENST00000518930	ST20-MTHFS	A0A0A6YYL1	179 aa		34.12	■■■■□ 3.05
PCM1-209	ENST00000518930	MST1R	Q04912	1400 aa		34.12	■■■■□ 3.05
PCM1-209	ENST00000518930	EIF4G2	P78344	907 aa	Known RBP eCLIP	34.11	■■■■□ 3.05
PCM1-209	ENST00000518930	WASL	O00401	505 aa	Predicted RBP	34.09	■■■■□ 3.05
PCM1-209	ENST00000518930	TULP4	Q9NRJ4	1543 aa		34.09	■■■■□ 3.05
PCM1-209	ENST00000518930	SLAIN2	Q9P270	581 aa		34.08	■■■■□ 3.05
PCM1-209	ENST00000518930	EVC2	Q86UK5	1308 aa		34.06	■■■■□ 3.04
PCM1-209	ENST00000518930	SCAF1	Q9H7N4	1312 aa	Known RBP	34.06	■■■■□ 3.04
PCM1-209	ENST00000518930	C1orf167	Q5SNV9	1468 aa		34.06	■■■■□ 3.04
PCM1-209	ENST00000518930	SLC24A1	O60721	1099 aa		34.05	■■■■□ 3.04
PCM1-209	ENST00000518930	PIP4K2B	P78356	416 aa		34.05	■■■■□ 3.04
PCM1-209	ENST00000518930	ANKAR	Q7Z5J8	1434 aa		34.04	■■■■□ 3.04
PCM1-209	ENST00000518930	NUTM2F	A1L443	756 aa		34.04	■■■■□ 3.04
PCM1-209	ENST00000518930	ROBO1	Q9Y6N7	1651 aa		34.03	■■■■□ 3.04
PCM1-209	ENST00000518930	HSPA5	P11021	654 aa	Known RBP	34.03	■■■■□ 3.04
PCM1-209	ENST00000518930	CDK19	Q9BWU1	502 aa		34.03	■■■■□ 3.04
PCM1-209	ENST00000518930	ITSN1	Q15811	1721 aa		34.02	■■■■□ 3.04
PCM1-209	ENST00000518930	USP32	Q8NFA0	1604 aa		34.02	■■■■□ 3.04
PCM1-209	ENST00000518930	RGPD8	O14715	1765 aa	Predicted RBP	34.01	■■■■□ 3.04
PCM1-209	ENST00000518930	SRPK2	P78362	688 aa	Known RBP	34.01	■■■■□ 3.03
PCM1-209	ENST00000518930	TESK2	Q96S53	571 aa		34.01	■■■■□ 3.03
PCM1-209	ENST00000518930	ATP7B	P35670	1465 aa		33.98	■■■■□ 3.03
PCM1-209	ENST00000518930	FBXO41	Q8TF61	875 aa		33.97	■■■■□ 3.03
PCM1-209	ENST00000518930	KIF1A	Q12756	1690 aa		33.96	■■■■□ 3.03
PCM1-209	ENST00000518930	TMF1	P82094	1093 aa		33.96	■■■■□ 3.03
PCM1-209	ENST00000518930	TOPAZ1	Q8N9V7	1692 aa		33.96	■■■■□ 3.03
PCM1-209	ENST00000518930	ESCO1	Q5FWF5	840 aa		33.94	■■■■□ 3.02
PCM1-209	ENST00000518930	CABP2	Q9NPB3	220 aa		33.94	■■■■□ 3.02
PCM1-209	ENST00000518930	PRR36	Q9H6K5	1346 aa		33.93	■■■■□ 3.02
PCM1-209	ENST00000518930	BRINP3	Q76B58	766 aa		33.92	■■■■□ 3.02
PCM1-209	ENST00000518930	NUDT16	Q96DE0	195 aa	Known RBP	33.92	■■■■□ 3.02
PCM1-209	ENST00000518930	ATAD2	Q6PL18	1390 aa		33.9	■■■■□ 3.02
PCM1-209	ENST00000518930	DISP3	Q9P2K9	1392 aa		33.9	■■■■□ 3.02
PCM1-209	ENST00000518930	ORAI2	Q96SN7	254 aa		33.9	■■■■□ 3.02
PCM1-209	ENST00000518930	CDCA8	Q53HL2	280 aa		33.87	■■■■□ 3.01
PCM1-209	ENST00000518930	NHSL1	Q5SYE7	1610 aa		33.86	■■■■□ 3.01
PCM1-209	ENST00000518930	CCDC61	Q9Y6R9	512 aa		33.86	■■■■□ 3.01
PCM1-209	ENST00000518930	PHF8	Q9UPP1	1060 aa		33.85	■■■■□ 3.01
PCM1-209	ENST00000518930	PPIP5K1	Q6PFW1	1433 aa		33.85	■■■■□ 3.01
PCM1-209	ENST00000518930	AHDC1	Q5TGY3	1603 aa	Predicted RBP	33.84	■■■■□ 3.01
PCM1-209	ENST00000518930	PUS7	Q96PZ0	661 aa	Known RBP	33.84	■■■■□ 3.01
PCM1-209	ENST00000518930	PHLPP1	O60346	1717 aa		33.83	■■■■□ 3.01
PCM1-209	ENST00000518930	PMFBP1	Q8TBY8	1022 aa		33.8	■■■■□ 3
PCM1-209	ENST00000518930	NPHP3	Q7Z494	1330 aa		33.79	■■■■□ 3
PCM1-209	ENST00000518930	NGDN	Q8NEJ9	315 aa	Known RBP	33.76	■■■□□ 2.99
PCM1-209	ENST00000518930	NINL	Q9Y2I6	1382 aa		33.75	■■■□□ 2.99
PCM1-209	ENST00000518930	FOXO3	O43524	673 aa		33.75	■■■□□ 2.99
PCM1-209	ENST00000518930	PLEKHG3	A1L390	1219 aa		33.74	■■■□□ 2.99
PCM1-209	ENST00000518930	TMC1	Q8TDI8	760 aa		33.74	■■■□□ 2.99
PCM1-209	ENST00000518930	CABP1	Q9NZU7	370 aa		33.74	■■■□□ 2.99
PCM1-209	ENST00000518930	DDX17	Q92841	729 aa	Known RBP	33.73	■■■□□ 2.99
PCM1-209	ENST00000518930	POLR3GL	Q9BT43	218 aa		33.73	■■■□□ 2.99
PCM1-209	ENST00000518930	COL16A1	Q07092	1604 aa	Predicted RBP	33.72	■■■□□ 2.99
PCM1-209	ENST00000518930	POLR3A	O14802	1390 aa	Predicted RBP	33.72	■■■□□ 2.99
PCM1-209	ENST00000518930	MYOM1	P52179	1685 aa		33.71	■■■□□ 2.99
PCM1-209	ENST00000518930	ACE	P12821	1306 aa		33.71	■■■□□ 2.99
PCM1-209	ENST00000518930	PXDN	Q92626	1479 aa		33.7	■■■□□ 2.99
PCM1-209	ENST00000518930	PSME1	Q06323	249 aa		33.7	■■■□□ 2.99
PCM1-209	ENST00000518930	AKAP12	Q02952	1782 aa		33.7	■■■□□ 2.98
PCM1-209	ENST00000518930	HSPA1L	P34931	641 aa		33.69	■■■□□ 2.98
PCM1-209	ENST00000518930	XPC	Q01831	940 aa	Predicted RBP	33.67	■■■□□ 2.98
PCM1-209	ENST00000518930	SOS2	Q07890	1332 aa	Predicted RBP	33.66	■■■□□ 2.98
PCM1-209	ENST00000518930	C11orf95	C9JLR9	678 aa	Predicted RBP	33.65	■■■□□ 2.98
PCM1-209	ENST00000518930	KRT28	Q7Z3Y7	464 aa		33.65	■■■□□ 2.98
PCM1-209	ENST00000518930	KIF7	Q2M1P5	1343 aa		33.64	■■■□□ 2.98
PCM1-209	ENST00000518930	SLC12A5	Q9H2X9	1139 aa		33.64	■■■□□ 2.98
PCM1-209	ENST00000518930	MON2	Q7Z3U7	1717 aa		33.63	■■■□□ 2.97
PCM1-209	ENST00000518930	TRPM3	Q9HCF6	1732 aa	Predicted RBP	33.63	■■■□□ 2.97
PCM1-209	ENST00000518930	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	33.63	■■■□□ 2.97
PCM1-209	ENST00000518930	TERF2IP	Q9NYB0	399 aa		33.63	■■■□□ 2.97
PCM1-209	ENST00000518930	CPSF1	Q10570	1443 aa	Known RBP	33.62	■■■□□ 2.97
PCM1-209	ENST00000518930	CD163L1	Q9NR16	1453 aa		33.61	■■■□□ 2.97
PCM1-209	ENST00000518930	USP6	P35125	1406 aa		33.61	■■■□□ 2.97
PCM1-209	ENST00000518930	ILDR1	Q86SU0	546 aa	Predicted RBP	33.6	■■■□□ 2.97
PCM1-209	ENST00000518930	ZNF692	Q9BU19	519 aa	Predicted RBP	33.6	■■■□□ 2.97
PCM1-209	ENST00000518930	SBNO1	A3KN83	1393 aa		33.6	■■■□□ 2.97
PCM1-209	ENST00000518930	KTN1	Q86UP2	1357 aa	Known RBP	33.6	■■■□□ 2.97
PCM1-209	ENST00000518930	CCDC7	Q96M83	1385 aa		33.6	■■■□□ 2.97
PCM1-209	ENST00000518930	LRRC59	Q96AG4	307 aa	Known RBP	33.59	■■■□□ 2.97
PCM1-209	ENST00000518930		A0A1W2PP64	1363 aa		33.59	■■■□□ 2.97
PCM1-209	ENST00000518930	ANKRD36B	Q8N2N9	1353 aa		33.59	■■■□□ 2.97
PCM1-209	ENST00000518930	TNS3	Q68CZ2	1445 aa		33.58	■■■□□ 2.97
PCM1-209	ENST00000518930	BRD4	O60885	1362 aa	Predicted RBP	33.58	■■■□□ 2.97

Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms