RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 PHF23Q9BUL5 403 aaPredicted RBP11.04□□□□□ -0.64
CTNNA1-210ENST00000518825 NUTM2DQ5VT03 806 aaPredicted RBP11.03□□□□□ -0.64
CTNNA1-210ENST00000518825 TULP4Q9NRJ4 1543 aa11.03□□□□□ -0.64
CTNNA1-210ENST00000518825 PIK3C2BO00750 1634 aa11.03□□□□□ -0.64
CTNNA1-210ENST00000518825 USP32Q8NFA0 1604 aa11.02□□□□□ -0.64
CTNNA1-210ENST00000518825 GLI2P10070 1586 aa11.02□□□□□ -0.65
CTNNA1-210ENST00000518825 RRP7AQ9Y3A4 280 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-210ENST00000518825 SLC4A3P48751 1232 aa11.02□□□□□ -0.65
CTNNA1-210ENST00000518825 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.02□□□□□ -0.65
CTNNA1-210ENST00000518825 CAMSAP1Q5T5Y3 1602 aa11.02□□□□□ -0.65
CTNNA1-210ENST00000518825 ARHGEF28Q8N1W1 1705 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 NEXMIFQ5QGS0 1516 aa11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 MORC1Q86VD1 984 aa11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 RAPGEF3O95398 923 aa11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 PANK1Q8TE04 598 aa11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
CTNNA1-210ENST00000518825 FAM161AQ3B820 660 aa11□□□□□ -0.65
CTNNA1-210ENST00000518825 RGS3P49796 1198 aa11□□□□□ -0.65
CTNNA1-210ENST00000518825 MTHFSP49914 203 aa11□□□□□ -0.65
CTNNA1-210ENST00000518825 NEUROD2Q15784 382 aa11□□□□□ -0.65
CTNNA1-210ENST00000518825 TCP11L2Q8N4U5 519 aa11□□□□□ -0.65
CTNNA1-210ENST00000518825 RLBP1P12271 317 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 NGEFQ8N5V2 710 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 RUNDC1Q96C34 613 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 COG6Q9Y2V7 657 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 CFAP74Q9C0B2 1584 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 RARSP54136 660 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 PDE3AQ14432 1141 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 USP19O94966 1318 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 NEFMP07197 916 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 DIP2CQ9Y2E4 1556 aa10.98□□□□□ -0.65
CTNNA1-210ENST00000518825 CABP2Q9NPB3 220 aa10.97□□□□□ -0.65
CTNNA1-210ENST00000518825 ANKRD36BQ8N2N9 1353 aa10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 IDI1Q13907 227 aa10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 CGNL1Q0VF96 1302 aa10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 SEC24BO95487 1268 aa10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 RTL5Q5HYW3 569 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 CLUAP1Q96AJ1 413 aa10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 SENP3Q9H4L4 574 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-210ENST00000518825 MYO5BQ9ULV0 1848 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 PLPPR3Q6T4P5 718 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 VIRMAQ69YN4 1812 aaKnown RBP10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 ADGRB2O60241 1585 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 SAFB2Q14151 953 aaKnown RBP eCLIP10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 DDRGK1Q96HY6 314 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 BCL2L13Q9BXK5 485 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 FRAT1Q92837 279 aaPredicted RBP10.95□□□□□ -0.66
CTNNA1-210ENST00000518825 NPM1P06748 294 aaKnown RBP eCLIP10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 CCDC27Q2M243 656 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 WDR63Q8IWG1 891 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 PUS7Q96PZ0 661 aaKnown RBP10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 A0A1W2PP64 1363 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 YEATS2Q9ULM3 1422 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 RICTORQ6R327 1708 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 CD163L1Q9NR16 1453 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 EVC2Q86UK5 1308 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 ARHGAP31Q2M1Z3 1444 aa10.94□□□□□ -0.66
CTNNA1-210ENST00000518825 USP35Q9P2H5 1018 aa10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 NINLQ9Y2I6 1382 aa10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 COL3A1P02461 1466 aaPredicted RBP10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 PTPRMP28827 1452 aa10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 PLEKHF1Q96S99 279 aa10.93□□□□□ -0.66
CTNNA1-210ENST00000518825 NEO1Q92859 1461 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 OSCARQ8IYS5 282 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 TMEM131LA2VDJ0 1609 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 ABCC11Q96J66 1382 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 PPM1GO15355 546 aaPredicted RBP10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 NFKBIBQ15653 356 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
CTNNA1-210ENST00000518825 STK26Q9P289 416 aa10.91□□□□□ -0.66
CTNNA1-210ENST00000518825 NSD2O96028 1365 aa10.91□□□□□ -0.66
CTNNA1-210ENST00000518825 U2AF1L5P0DN76 240 aaPredicted RBP10.91□□□□□ -0.66
CTNNA1-210ENST00000518825 U2AF1Q01081 240 aaKnown RBP eCLIP10.91□□□□□ -0.66
CTNNA1-210ENST00000518825 TSR2Q969E8 191 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-210ENST00000518825 GGNBP2Q9H3C7 697 aa10.9□□□□□ -0.66
CTNNA1-210ENST00000518825 TRIM35Q9UPQ4 493 aa10.9□□□□□ -0.66
CTNNA1-210ENST00000518825 CANXP27824 592 aaKnown RBP10.9□□□□□ -0.66
CTNNA1-210ENST00000518825 PREX1Q8TCU6 1659 aa10.9□□□□□ -0.66
CTNNA1-210ENST00000518825 FYB1O15117 783 aa10.89□□□□□ -0.67
CTNNA1-210ENST00000518825 NCBP3Q53F19 620 aaKnown RBP10.89□□□□□ -0.67
CTNNA1-210ENST00000518825 FBXO31Q5XUX0 539 aaPredicted RBP10.88□□□□□ -0.67
CTNNA1-210ENST00000518825 CFAP53Q96M91 514 aa10.88□□□□□ -0.67
CTNNA1-210ENST00000518825 CLTCQ00610 1675 aaKnown RBP10.88□□□□□ -0.67
CTNNA1-210ENST00000518825 PRAM1Q96QH2 718 aa10.88□□□□□ -0.67
CTNNA1-210ENST00000518825 MINK1Q8N4C8 1332 aaPredicted RBP10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 YTHDC2Q9H6S0 1430 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 MAPK8IP3Q9UPT6 1336 aa10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 TMPOP42166 694 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 SRPK2P78362 688 aaKnown RBP10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 SLC52A1Q9NWF4 448 aa10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 PDZRN3Q9UPQ7 1066 aa10.87□□□□□ -0.67
CTNNA1-210ENST00000518825 IL27Q8NEV9 243 aa10.86□□□□□ -0.67
CTNNA1-210ENST00000518825 ARHGEF40Q8TER5 1519 aa10.86□□□□□ -0.67
CTNNA1-210ENST00000518825 FBLN1P23142 703 aa10.86□□□□□ -0.67
CTNNA1-210ENST00000518825 EXOSC9Q06265 439 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms