RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 Q3C1V9 767 aa7.8□□□□□ -1.16
VPS13B-207ENST00000518569 PCDHGC3Q9UN70 934 aa7.8□□□□□ -1.16
VPS13B-207ENST00000518569 PCDHB15Q9Y5E8 787 aa7.8□□□□□ -1.16
VPS13B-207ENST00000518569 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 NR1I2O75469 434 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 GUCA2AQ02747 115 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 PUS10Q3MIT2 529 aaKnown RBP7.79□□□□□ -1.16
VPS13B-207ENST00000518569 ZNF516Q92618 1163 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 HLA-CQ95604 372 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 ZBTB3Q9H5J0 574 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 ATP1B4Q9UN42 357 aaPredicted RBP7.79□□□□□ -1.16
VPS13B-207ENST00000518569 SLC27A5Q9Y2P5 690 aa7.79□□□□□ -1.16
VPS13B-207ENST00000518569 MTMR2Q13614 643 aa7.78□□□□□ -1.16
VPS13B-207ENST00000518569 PRKD2Q9BZL6 878 aa7.78□□□□□ -1.16
VPS13B-207ENST00000518569 HRCP23327 699 aa7.77□□□□□ -1.17
VPS13B-207ENST00000518569 QPCTQ16769 361 aa7.77□□□□□ -1.17
VPS13B-207ENST00000518569 PPP1R18Q6NYC8 613 aa7.77□□□□□ -1.17
VPS13B-207ENST00000518569 SCUBE3Q8IX30 993 aa7.77□□□□□ -1.17
VPS13B-207ENST00000518569 RFC5P40937 340 aa7.76□□□□□ -1.17
VPS13B-207ENST00000518569 CSPP1Q1MSJ5 1256 aa7.76□□□□□ -1.17
VPS13B-207ENST00000518569 TMEM259Q4ZIN3 620 aa7.76□□□□□ -1.17
VPS13B-207ENST00000518569 BLOC1S3Q6QNY0 202 aa7.76□□□□□ -1.17
VPS13B-207ENST00000518569 NUTM2BA6NNL0 878 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 NUTM2EB1AL46 878 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 C6orf229H3BNL8 230 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 GFRA3O60609 400 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 FMNL1O95466 1100 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 GGCXP38435 758 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 NUTM2DQ5VT03 806 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 BRICD5Q6PL45 260 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 RETREG3Q86VR2 466 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 NUTM2AQ8IVF1 878 aaPredicted RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 BANK1Q8NDB2 785 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 THAP11Q96EK4 314 aa7.75□□□□□ -1.17
VPS13B-207ENST00000518569 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.75□□□□□ -1.17
VPS13B-207ENST00000518569 LAPTM4AQ15012 233 aa7.74□□□□□ -1.17
VPS13B-207ENST00000518569 RTL5Q5HYW3 569 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-207ENST00000518569 FBXO31Q5XUX0 539 aaPredicted RBP7.74□□□□□ -1.17
VPS13B-207ENST00000518569 ERICH6Q7L0X2 663 aa7.74□□□□□ -1.17
VPS13B-207ENST00000518569 NKX2-3Q8TAU0 364 aa7.74□□□□□ -1.17
VPS13B-207ENST00000518569 CABLES1Q8TDN4 633 aa7.74□□□□□ -1.17
VPS13B-207ENST00000518569 ZPR1O75312 459 aa7.73□□□□□ -1.17
VPS13B-207ENST00000518569 FLIIQ13045 1269 aa7.73□□□□□ -1.17
VPS13B-207ENST00000518569 DESI1Q6ICB0 168 aa7.72□□□□□ -1.17
VPS13B-207ENST00000518569 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
VPS13B-207ENST00000518569 USB1Q9BQ65 265 aaKnown RBP7.72□□□□□ -1.17
VPS13B-207ENST00000518569 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
VPS13B-207ENST00000518569 CFAP99D6REC4 459 aa7.7□□□□□ -1.18
VPS13B-207ENST00000518569 SOCS7O14512 581 aa7.7□□□□□ -1.18
VPS13B-207ENST00000518569 MSS51Q4VC12 460 aa7.7□□□□□ -1.18
VPS13B-207ENST00000518569 HELBQ8NG08 1087 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-207ENST00000518569 PRR7Q8TB68 274 aa7.7□□□□□ -1.18
VPS13B-207ENST00000518569 SPSB2Q99619 263 aa7.7□□□□□ -1.18
VPS13B-207ENST00000518569 V9GY48 417 aaPredicted RBP7.7□□□□□ -1.18
VPS13B-207ENST00000518569 ADH1BP00325 375 aa7.69□□□□□ -1.18
VPS13B-207ENST00000518569 TLL1O43897 1013 aa7.68□□□□□ -1.18
VPS13B-207ENST00000518569 AP1G2O75843 785 aa7.68□□□□□ -1.18
VPS13B-207ENST00000518569 NRG2O14511 850 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-207ENST00000518569 FAM160A2Q8N612 972 aaPredicted RBP7.67□□□□□ -1.18
VPS13B-207ENST00000518569 JUNDP17535 347 aa7.66□□□□□ -1.18
VPS13B-207ENST00000518569 MMP16P51512 607 aa7.66□□□□□ -1.18
VPS13B-207ENST00000518569 MCM6Q14566 821 aa7.66□□□□□ -1.18
VPS13B-207ENST00000518569 PDZRN3Q9UPQ7 1066 aa7.66□□□□□ -1.18
VPS13B-207ENST00000518569 APBB1O00213 710 aa7.65□□□□□ -1.18
VPS13B-207ENST00000518569 DXOO77932 396 aaKnown RBP7.65□□□□□ -1.18
VPS13B-207ENST00000518569 USP17L8P0C7I0 530 aa7.65□□□□□ -1.18
VPS13B-207ENST00000518569 CTDSPL2Q05D32 466 aa7.65□□□□□ -1.18
VPS13B-207ENST00000518569 TRAF7Q6Q0C0 670 aa7.65□□□□□ -1.18
VPS13B-207ENST00000518569 LYPD8Q6UX82 237 aa7.65□□□□□ -1.18
VPS13B-207ENST00000518569 RNF223E7ERA6 249 aa7.63□□□□□ -1.19
VPS13B-207ENST00000518569 PTPRNQ16849 979 aa7.63□□□□□ -1.19
VPS13B-207ENST00000518569 TSC1Q92574 1164 aa7.63□□□□□ -1.19
VPS13B-207ENST00000518569 SLC6A16Q9GZN6 736 aa7.63□□□□□ -1.19
VPS13B-207ENST00000518569 SNRKQ9NRH2 765 aa7.63□□□□□ -1.19
VPS13B-207ENST00000518569 S1PR4O95977 384 aa7.62□□□□□ -1.19
VPS13B-207ENST00000518569 C14orf37Q86TY3 774 aa7.62□□□□□ -1.19
VPS13B-207ENST00000518569 MTMR14Q8NCE2 650 aa7.62□□□□□ -1.19
VPS13B-207ENST00000518569 PPEF1O14829 653 aaPredicted RBP7.61□□□□□ -1.19
VPS13B-207ENST00000518569 SLC19A1P41440 591 aa7.61□□□□□ -1.19
VPS13B-207ENST00000518569 PRM3Q9NNZ6 103 aa7.61□□□□□ -1.19
VPS13B-207ENST00000518569 PER1O15534 1290 aaPredicted RBP7.6□□□□□ -1.19
VPS13B-207ENST00000518569 LRRN4Q8WUT4 740 aa7.6□□□□□ -1.19
VPS13B-207ENST00000518569 PRDM9Q9NQV7 894 aa7.6□□□□□ -1.19
VPS13B-207ENST00000518569 CCNYL3P0C7X3 344 aa7.59□□□□□ -1.19
VPS13B-207ENST00000518569 UBTFP17480 764 aaKnown RBP7.59□□□□□ -1.19
VPS13B-207ENST00000518569 GJD4Q96KN9 370 aaPredicted RBP7.59□□□□□ -1.19
VPS13B-207ENST00000518569 EVA1BQ9NVM1 165 aa7.59□□□□□ -1.19
VPS13B-207ENST00000518569 A6NJR5 290 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 LCE2BO14633 110 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 F12P00748 615 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-207ENST00000518569 ANKLE1Q8NAG6 615 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 NUDT12Q9BQG2 462 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 ZMYND15Q9H091 742 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 HMX1Q9NP08 348 aaPredicted RBP7.58□□□□□ -1.2
VPS13B-207ENST00000518569 TIMELESSQ9UNS1 1208 aa7.58□□□□□ -1.2
VPS13B-207ENST00000518569 KCNH2Q12809 1159 aa7.57□□□□□ -1.2
VPS13B-207ENST00000518569 TRIM34Q9BYJ4 488 aa7.57□□□□□ -1.2
VPS13B-207ENST00000518569 RAD21O60216 631 aa7.56□□□□□ -1.2
VPS13B-207ENST00000518569 PNMA1Q8ND90 353 aa7.56□□□□□ -1.2
VPS13B-207ENST00000518569 NDUFB9Q9Y6M9 179 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms