RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 NBPF8Q3BBV2 869 aa11.39□□□□□ -0.59
SRGAP3-211ENST00000518265 SEMA3EO15041 775 aa11.38□□□□□ -0.59
SRGAP3-211ENST00000518265 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
SRGAP3-211ENST00000518265 SPATA31E1Q6ZUB1 1445 aa11.38□□□□□ -0.59
SRGAP3-211ENST00000518265 ADGRB3O60242 1522 aa11.37□□□□□ -0.59
SRGAP3-211ENST00000518265 MYO3AQ8NEV4 1616 aa11.37□□□□□ -0.59
SRGAP3-211ENST00000518265 HIRIP3Q9BW71 556 aaPredicted RBP11.36□□□□□ -0.59
SRGAP3-211ENST00000518265 TNRQ92752 1358 aa11.35□□□□□ -0.59
SRGAP3-211ENST00000518265 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
SRGAP3-211ENST00000518265 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
SRGAP3-211ENST00000518265 SETD1BQ9UPS6 1966 aaKnown RBP11.34□□□□□ -0.59
SRGAP3-211ENST00000518265 KDM4FA0A1W2PPD8 638 aa11.33□□□□□ -0.59
SRGAP3-211ENST00000518265 PTPRMP28827 1452 aa11.33□□□□□ -0.6
SRGAP3-211ENST00000518265 NEXMIFQ5QGS0 1516 aa11.33□□□□□ -0.6
SRGAP3-211ENST00000518265 ADGRF5Q8IZF2 1346 aa11.32□□□□□ -0.6
SRGAP3-211ENST00000518265 TESPA1A2RU30 521 aaPredicted RBP11.31□□□□□ -0.6
SRGAP3-211ENST00000518265 A2ML1A8K2U0 1454 aa11.31□□□□□ -0.6
SRGAP3-211ENST00000518265 ARHGEF1Q92888 912 aaKnown RBP11.31□□□□□ -0.6
SRGAP3-211ENST00000518265 NBPF1Q3BBV0 1214 aa11.3□□□□□ -0.6
SRGAP3-211ENST00000518265 CREBZFQ9NS37 354 aa11.3□□□□□ -0.6
SRGAP3-211ENST00000518265 SLC52A1Q9NWF4 448 aa11.3□□□□□ -0.6
SRGAP3-211ENST00000518265 PRAG1Q86YV5 1406 aa11.3□□□□□ -0.6
SRGAP3-211ENST00000518265 IQGAP1P46940 1657 aa11.3□□□□□ -0.6
SRGAP3-211ENST00000518265 CEP170BQ9Y4F5 1589 aaPredicted RBP11.29□□□□□ -0.6
SRGAP3-211ENST00000518265 ZMYND10O75800 440 aa11.28□□□□□ -0.6
SRGAP3-211ENST00000518265 ZNF142P52746 1687 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-211ENST00000518265 GPBP1L1Q9HC44 474 aaPredicted RBP11.28□□□□□ -0.6
SRGAP3-211ENST00000518265 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
SRGAP3-211ENST00000518265 RIMS2Q9UQ26 1411 aa11.27□□□□□ -0.61
SRGAP3-211ENST00000518265 KDM5AP29375 1690 aaKnown RBP11.26□□□□□ -0.61
SRGAP3-211ENST00000518265 CFAP70Q5T0N1 1121 aa11.26□□□□□ -0.61
SRGAP3-211ENST00000518265 UHRF1BP1Q6BDS2 1440 aa11.26□□□□□ -0.61
SRGAP3-211ENST00000518265 NLRP1Q9C000 1473 aa11.25□□□□□ -0.61
SRGAP3-211ENST00000518265 SETD1AO15047 1707 aaKnown RBP11.25□□□□□ -0.61
SRGAP3-211ENST00000518265 NRXN3Q9Y4C0 1643 aa11.25□□□□□ -0.61
SRGAP3-211ENST00000518265 ZMYND15Q9H091 742 aa11.25□□□□□ -0.61
SRGAP3-211ENST00000518265 KIAA1210Q9ULL0 1709 aa11.25□□□□□ -0.61
SRGAP3-211ENST00000518265 MYOM2P54296 1465 aa11.24□□□□□ -0.61
SRGAP3-211ENST00000518265 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
SRGAP3-211ENST00000518265 ROCK2O75116 1388 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-211ENST00000518265 TMEM132EQ6IEE7 984 aa11.24□□□□□ -0.61
SRGAP3-211ENST00000518265 ARID3AQ99856 593 aa11.24□□□□□ -0.61
SRGAP3-211ENST00000518265 ZFYVE9O95405 1425 aa11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 LTKP29376 864 aa11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 E2F4Q16254 413 aa11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 HSPA5P11021 654 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 CARD11Q9BXL7 1154 aa11.23□□□□□ -0.61
SRGAP3-211ENST00000518265 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
SRGAP3-211ENST00000518265 CENPBP07199 599 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-211ENST00000518265 NRXN1Q9ULB1 1477 aa11.22□□□□□ -0.61
SRGAP3-211ENST00000518265 TMEM2Q9UHN6 1383 aa11.22□□□□□ -0.61
SRGAP3-211ENST00000518265 ALKQ9UM73 1620 aa11.22□□□□□ -0.61
SRGAP3-211ENST00000518265 PPP1R37O75864 691 aa11.21□□□□□ -0.61
SRGAP3-211ENST00000518265 IL27Q8NEV9 243 aa11.21□□□□□ -0.61
SRGAP3-211ENST00000518265 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
SRGAP3-211ENST00000518265 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.61
SRGAP3-211ENST00000518265 PDIA4P13667 645 aaKnown RBP11.21□□□□□ -0.62
SRGAP3-211ENST00000518265 HSPA2P54652 639 aa11.21□□□□□ -0.62
SRGAP3-211ENST00000518265 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
SRGAP3-211ENST00000518265 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-211ENST00000518265 TXNDC2Q86VQ3 553 aa11.2□□□□□ -0.62
SRGAP3-211ENST00000518265 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
SRGAP3-211ENST00000518265 ARHGEF28Q8N1W1 1705 aaKnown RBP11.2□□□□□ -0.62
SRGAP3-211ENST00000518265 STK26Q9P289 416 aa11.19□□□□□ -0.62
SRGAP3-211ENST00000518265 USP47Q96K76 1375 aa11.19□□□□□ -0.62
SRGAP3-211ENST00000518265 SLIT1O75093 1534 aa11.19□□□□□ -0.62
SRGAP3-211ENST00000518265 LAMC1P11047 1609 aa11.19□□□□□ -0.62
SRGAP3-211ENST00000518265 NPM2Q86SE8 214 aaKnown RBP11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 QRICH2Q9H0J4 1663 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 THEMISQ8N1K5 641 aaPredicted RBP11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 NCKAP5LQ9HCH0 1330 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 ARHGAP23Q9P227 1491 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 ADGRB1O14514 1584 aa11.18□□□□□ -0.62
SRGAP3-211ENST00000518265 EIF4G2P78344 907 aaKnown RBP eCLIP11.17□□□□□ -0.62
SRGAP3-211ENST00000518265 BARGINQ6ZT62 677 aa11.17□□□□□ -0.62
SRGAP3-211ENST00000518265 STRCQ7RTU9 1775 aa11.17□□□□□ -0.62
SRGAP3-211ENST00000518265 ST20-MTHFSA0A0A6YYL1 179 aa11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 C11orf95C9JLR9 678 aaPredicted RBP11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 C14orf93Q9H972 538 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 SCAF11Q99590 1463 aaKnown RBP11.16□□□□□ -0.62
SRGAP3-211ENST00000518265 SETBP1Q9Y6X0 1596 aa11.15□□□□□ -0.62
SRGAP3-211ENST00000518265 METP08581 1390 aa11.15□□□□□ -0.62
SRGAP3-211ENST00000518265 STAC3Q96MF2 364 aa11.15□□□□□ -0.62
SRGAP3-211ENST00000518265 EID1Q9Y6B2 187 aa11.15□□□□□ -0.62
SRGAP3-211ENST00000518265 LMTK3Q96Q04 1460 aa11.15□□□□□ -0.63
SRGAP3-211ENST00000518265 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
SRGAP3-211ENST00000518265 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.14□□□□□ -0.63
SRGAP3-211ENST00000518265 CLEC11AQ9Y240 323 aa11.14□□□□□ -0.63
SRGAP3-211ENST00000518265 ADAMTS13Q76LX8 1427 aa11.14□□□□□ -0.63
SRGAP3-211ENST00000518265 GPRASP1Q5JY77 1395 aa11.14□□□□□ -0.63
SRGAP3-211ENST00000518265 CHD2O14647 1828 aaKnown RBP11.13□□□□□ -0.63
SRGAP3-211ENST00000518265 PLEKHG1Q9ULL1 1385 aa11.12□□□□□ -0.63
SRGAP3-211ENST00000518265 ANKLE2Q86XL3 938 aa11.12□□□□□ -0.63
SRGAP3-211ENST00000518265 PCDHB8Q9UN66 801 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms