RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 ACIN1Q9UKV3 1341 aaKnown RBP7.32□□□□□ -1.24
HMGB1P19-201ENST00000517578 IRF6O14896 467 aa7.31□□□□□ -1.24
HMGB1P19-201ENST00000517578 ST8SIA5O15466 376 aa7.31□□□□□ -1.24
HMGB1P19-201ENST00000517578 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
HMGB1P19-201ENST00000517578 TOR4AQ9NXH8 423 aa7.31□□□□□ -1.24
HMGB1P19-201ENST00000517578 GRIPAP1Q4V328 841 aa7.3□□□□□ -1.24
HMGB1P19-201ENST00000517578 CD2BP2O95400 341 aaKnown RBP7.29□□□□□ -1.24
HMGB1P19-201ENST00000517578 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P19-201ENST00000517578 HLA-CQ95604 372 aa7.29□□□□□ -1.24
HMGB1P19-201ENST00000517578 MMP16P51512 607 aa7.28□□□□□ -1.24
HMGB1P19-201ENST00000517578 MDM2Q00987 491 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P19-201ENST00000517578 MINK1Q8N4C8 1332 aaPredicted RBP7.27□□□□□ -1.24
HMGB1P19-201ENST00000517578 KDM4AO75164 1064 aa7.27□□□□□ -1.25
HMGB1P19-201ENST00000517578 AVPP01185 164 aa7.27□□□□□ -1.25
HMGB1P19-201ENST00000517578 Q3C1V9 767 aa7.27□□□□□ -1.25
HMGB1P19-201ENST00000517578 CRIPAKQ8N1N5 446 aa7.27□□□□□ -1.25
HMGB1P19-201ENST00000517578 CCDC102AQ96A19 550 aa7.27□□□□□ -1.25
HMGB1P19-201ENST00000517578 FAM9AQ8IZU1 332 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P19-201ENST00000517578 BCANQ96GW7 911 aa7.26□□□□□ -1.25
HMGB1P19-201ENST00000517578 ANP32EQ9BTT0 268 aa7.26□□□□□ -1.25
HMGB1P19-201ENST00000517578 DACH1Q9UI36 760 aa7.26□□□□□ -1.25
HMGB1P19-201ENST00000517578 ZBTB24O43167 697 aaPredicted RBP7.25□□□□□ -1.25
HMGB1P19-201ENST00000517578 HOXA2O43364 376 aa7.25□□□□□ -1.25
HMGB1P19-201ENST00000517578 DXOO77932 396 aaKnown RBP7.25□□□□□ -1.25
HMGB1P19-201ENST00000517578 CYP4X1Q8N118 509 aa7.25□□□□□ -1.25
HMGB1P19-201ENST00000517578 USB1Q9BQ65 265 aaKnown RBP7.25□□□□□ -1.25
HMGB1P19-201ENST00000517578 TRIM32Q13049 653 aa7.24□□□□□ -1.25
HMGB1P19-201ENST00000517578 WNT7AO00755 349 aa7.23□□□□□ -1.25
HMGB1P19-201ENST00000517578 USP46P62068 366 aa7.23□□□□□ -1.25
HMGB1P19-201ENST00000517578 GUCA2AQ02747 115 aa7.23□□□□□ -1.25
HMGB1P19-201ENST00000517578 GPCPD1Q9NPB8 672 aa7.23□□□□□ -1.25
HMGB1P19-201ENST00000517578 FAM217BQ9NTX9 383 aaPredicted RBP7.23□□□□□ -1.25
HMGB1P19-201ENST00000517578 EIF5BO60841 1220 aaKnown RBP7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 SMPD1P17405 629 aa7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 SMCPP49901 116 aaPredicted RBP7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 CTC1Q2NKJ3 1217 aa7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 MRGPRX2Q96LB1 330 aa7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 REPIN1Q9BWE0 567 aaKnown RBP7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 PCGF6Q9BYE7 350 aa7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 CLSPNQ9HAW4 1339 aa7.21□□□□□ -1.26
HMGB1P19-201ENST00000517578 TTC24A2A3L6 582 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 AXIN1O15169 862 aa7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 CLCN1P35523 988 aa7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 SNIP1Q8TAD8 396 aaKnown RBP7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 SYMPKQ92797 1274 aaKnown RBP7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 GMPR2Q9P2T1 348 aaKnown RBP7.2□□□□□ -1.26
HMGB1P19-201ENST00000517578 SKOR1P84550 965 aa7.19□□□□□ -1.26
HMGB1P19-201ENST00000517578 GTF3C3Q9Y5Q9 886 aa7.19□□□□□ -1.26
HMGB1P19-201ENST00000517578 J3QL48 77 aa7.18□□□□□ -1.26
HMGB1P19-201ENST00000517578 JUNDP17535 347 aa7.18□□□□□ -1.26
HMGB1P19-201ENST00000517578 CCDC24Q8N4L8 307 aa7.18□□□□□ -1.26
HMGB1P19-201ENST00000517578 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
HMGB1P19-201ENST00000517578 ZC3H15Q8WU90 426 aaKnown RBP7.17□□□□□ -1.26
HMGB1P19-201ENST00000517578 PCDHGC3Q9UN70 934 aa7.17□□□□□ -1.26
HMGB1P19-201ENST00000517578 TREML4Q6UXN2 200 aa7.16□□□□□ -1.26
HMGB1P19-201ENST00000517578 RETREG3Q86VR2 466 aa7.16□□□□□ -1.26
HMGB1P19-201ENST00000517578 NUTM1Q86Y26 1132 aa7.16□□□□□ -1.26
HMGB1P19-201ENST00000517578 WNT7BP56706 349 aa7.15□□□□□ -1.26
HMGB1P19-201ENST00000517578 RC3H1Q5TC82 1133 aaKnown RBP7.15□□□□□ -1.26
HMGB1P19-201ENST00000517578 PTCRAQ6ISU1 281 aaPredicted RBP7.15□□□□□ -1.26
HMGB1P19-201ENST00000517578 HPS1Q92902 700 aa7.15□□□□□ -1.26
HMGB1P19-201ENST00000517578 C11orf95C9JLR9 678 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P19-201ENST00000517578 SSTR3P32745 418 aaPredicted RBP7.14□□□□□ -1.27
HMGB1P19-201ENST00000517578 NUDT12Q9BQG2 462 aa7.14□□□□□ -1.27
HMGB1P19-201ENST00000517578 ZMYND10O75800 440 aa7.13□□□□□ -1.27
HMGB1P19-201ENST00000517578 FDX1P10109 184 aa7.13□□□□□ -1.27
HMGB1P19-201ENST00000517578 BARGINQ6ZT62 677 aa7.13□□□□□ -1.27
HMGB1P19-201ENST00000517578 SPIRE2Q8WWL2 714 aa7.13□□□□□ -1.27
HMGB1P19-201ENST00000517578 ATP13A2Q9NQ11 1180 aa7.13□□□□□ -1.27
HMGB1P19-201ENST00000517578 MOXD2PA6NHM9 499 aa7.11□□□□□ -1.27
HMGB1P19-201ENST00000517578 C6orf229H3BNL8 230 aa7.11□□□□□ -1.27
HMGB1P19-201ENST00000517578 NDUFV2P19404 249 aa7.11□□□□□ -1.27
HMGB1P19-201ENST00000517578 TRIM26Q12899 539 aaPredicted RBP7.11□□□□□ -1.27
HMGB1P19-201ENST00000517578 AMHR2Q16671 573 aa7.11□□□□□ -1.27
HMGB1P19-201ENST00000517578 SIAH2O43255 324 aa7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 SNRPBP14678 240 aaKnown RBP7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 NFX1Q12986 1120 aaKnown RBP7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 NEUROD1Q13562 356 aa7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 GIGYF2Q6Y7W6 1299 aaKnown RBP7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 DCAF1Q9Y4B6 1507 aa7.1□□□□□ -1.27
HMGB1P19-201ENST00000517578 ALDH1A1P00352 501 aa7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 CCNYL3P0C7X3 344 aa7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 MS4A1P11836 297 aa7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 TTLL12Q14166 644 aaPredicted RBP7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 UBE2Q2Q8WVN8 375 aa7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 TRIM47Q96LD4 638 aa7.09□□□□□ -1.27
HMGB1P19-201ENST00000517578 WFS1O76024 890 aa7.08□□□□□ -1.28
HMGB1P19-201ENST00000517578 SH3BP2P78314 561 aa7.08□□□□□ -1.28
HMGB1P19-201ENST00000517578 PTPRNQ16849 979 aa7.08□□□□□ -1.28
HMGB1P19-201ENST00000517578 LCE2CQ5TA81 110 aa7.08□□□□□ -1.28
HMGB1P19-201ENST00000517578 ERICH6BQ5W0A0 696 aa7.08□□□□□ -1.28
HMGB1P19-201ENST00000517578 EHBP1Q8NDI1 1231 aa7.07□□□□□ -1.28
HMGB1P19-201ENST00000517578 UNC93B1Q9H1C4 597 aa7.07□□□□□ -1.28
HMGB1P19-201ENST00000517578 EVA1BQ9NVM1 165 aa7.07□□□□□ -1.28
HMGB1P19-201ENST00000517578 CCDC180Q9P1Z9 1646 aa7.07□□□□□ -1.28
HMGB1P19-201ENST00000517578 MTMR2Q13614 643 aa7.06□□□□□ -1.28
HMGB1P19-201ENST00000517578 PRR7Q8TB68 274 aa7.06□□□□□ -1.28
HMGB1P19-201ENST00000517578 BEGAINQ9BUH8 593 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms