RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 NAIPQ13075 1403 aa10.9□□□□□ -0.66
TNFRSF11B-202ENST00000517352 SETBP1Q9Y6X0 1596 aa10.9□□□□□ -0.67
TNFRSF11B-202ENST00000517352 PNPLA6Q8IY17 1366 aa10.9□□□□□ -0.67
TNFRSF11B-202ENST00000517352 FOXO3O43524 673 aa10.89□□□□□ -0.67
TNFRSF11B-202ENST00000517352 XPCQ01831 940 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF11B-202ENST00000517352 CCDC144AA2RUR9 1427 aa10.89□□□□□ -0.67
TNFRSF11B-202ENST00000517352 C1orf167Q5SNV9 1468 aa10.88□□□□□ -0.67
TNFRSF11B-202ENST00000517352 HFM1A2PYH4 1435 aa10.88□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SPHKAPQ2M3C7 1700 aa10.88□□□□□ -0.67
TNFRSF11B-202ENST00000517352 CCDC9Q9Y3X0 531 aaKnown RBP10.88□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ACIN1Q9UKV3 1341 aaKnown RBP10.87□□□□□ -0.67
TNFRSF11B-202ENST00000517352 RRBP1Q9P2E9 1410 aaKnown RBP10.87□□□□□ -0.67
TNFRSF11B-202ENST00000517352 MPHOSPH9Q99550 1183 aa10.87□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ATAD2Q6PL18 1390 aa10.87□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SOS2Q07890 1332 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SHPRHQ149N8 1683 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 PTCH1Q13635 1447 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 A0A0G2JS52 829 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 MYT1Q01538 1121 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 PSME1Q06323 249 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 TMEM132EQ6IEE7 984 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 WAPLQ7Z5K2 1190 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 POGKQ9P215 609 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ZRANB1Q9UGI0 708 aa10.86□□□□□ -0.67
TNFRSF11B-202ENST00000517352 NEXMIFQ5QGS0 1516 aa10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 CLTCL1P53675 1640 aa10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SETD1AO15047 1707 aaKnown RBP10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SF3B2Q13435 895 aaKnown RBP10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ANKRD30BQ9BXX2 1392 aa10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 CDK12Q9NYV4 1490 aaPredicted RBP10.85□□□□□ -0.67
TNFRSF11B-202ENST00000517352 C1QBPQ07021 282 aaKnown RBP10.84□□□□□ -0.67
TNFRSF11B-202ENST00000517352 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
TNFRSF11B-202ENST00000517352 ADGRF5Q8IZF2 1346 aa10.84□□□□□ -0.67
TNFRSF11B-202ENST00000517352 SAFB2Q14151 953 aaKnown RBP eCLIP10.83□□□□□ -0.68
TNFRSF11B-202ENST00000517352 KRT28Q7Z3Y7 464 aa10.83□□□□□ -0.68
TNFRSF11B-202ENST00000517352 FNBP4Q8N3X1 1017 aaPredicted RBP10.83□□□□□ -0.68
TNFRSF11B-202ENST00000517352 KIF1BO60333 1816 aa10.83□□□□□ -0.68
TNFRSF11B-202ENST00000517352 CCDC125Q86Z20 511 aa10.82□□□□□ -0.68
TNFRSF11B-202ENST00000517352 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
TNFRSF11B-202ENST00000517352 DHX57Q6P158 1386 aaKnown RBP10.81□□□□□ -0.68
TNFRSF11B-202ENST00000517352 GJD4Q96KN9 370 aaPredicted RBP10.81□□□□□ -0.68
TNFRSF11B-202ENST00000517352 RGS12O14924 1447 aa10.81□□□□□ -0.68
TNFRSF11B-202ENST00000517352 PHF8Q9UPP1 1060 aa10.8□□□□□ -0.68
TNFRSF11B-202ENST00000517352 UNC5CLQ8IV45 518 aa10.79□□□□□ -0.68
TNFRSF11B-202ENST00000517352 ABCC11Q96J66 1382 aa10.78□□□□□ -0.68
TNFRSF11B-202ENST00000517352 NHSL1Q5SYE7 1610 aa10.78□□□□□ -0.68
TNFRSF11B-202ENST00000517352 CFAP70Q5T0N1 1121 aa10.78□□□□□ -0.68
TNFRSF11B-202ENST00000517352 PRAM1Q96QH2 718 aa10.78□□□□□ -0.68
TNFRSF11B-202ENST00000517352 KDM2AQ9Y2K7 1162 aa10.78□□□□□ -0.68
TNFRSF11B-202ENST00000517352 PAK3O75914 559 aaPredicted RBP10.77□□□□□ -0.69
TNFRSF11B-202ENST00000517352 PMFBP1Q8TBY8 1022 aa10.77□□□□□ -0.69
TNFRSF11B-202ENST00000517352 NALCNQ8IZF0 1738 aa10.77□□□□□ -0.69
TNFRSF11B-202ENST00000517352 SPATA31A3Q5VYP0 1347 aa10.77□□□□□ -0.69
TNFRSF11B-202ENST00000517352 KCNA4P22459 653 aa10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 NGDNQ8NEJ9 315 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 CABLES1Q8TDN4 633 aa10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 SIRT1Q96EB6 747 aa10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 C14orf93Q9H972 538 aaKnown RBP10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 TRAK1Q9UPV9 953 aa10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 GPRASP1Q5JY77 1395 aa10.76□□□□□ -0.69
TNFRSF11B-202ENST00000517352 YTHDC2Q9H6S0 1430 aaKnown RBP10.75□□□□□ -0.69
TNFRSF11B-202ENST00000517352 PLEKHH1Q9ULM0 1364 aa10.75□□□□□ -0.69
TNFRSF11B-202ENST00000517352 SEPT12Q8IYM1 358 aa10.74□□□□□ -0.69
TNFRSF11B-202ENST00000517352 DCAF11Q8TEB1 546 aa10.74□□□□□ -0.69
TNFRSF11B-202ENST00000517352 HIRIP3Q9BW71 556 aaPredicted RBP10.74□□□□□ -0.69
TNFRSF11B-202ENST00000517352 ARHGEF10O15013 1369 aa10.74□□□□□ -0.69
TNFRSF11B-202ENST00000517352 ATRNO75882 1429 aa10.74□□□□□ -0.69
TNFRSF11B-202ENST00000517352 CDC42BPGQ6DT37 1551 aa10.73□□□□□ -0.69
TNFRSF11B-202ENST00000517352 MINK1Q8N4C8 1332 aaPredicted RBP10.73□□□□□ -0.69
TNFRSF11B-202ENST00000517352 PRAG1Q86YV5 1406 aa10.73□□□□□ -0.69
TNFRSF11B-202ENST00000517352 VPS72Q15906 364 aa10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 KRT27Q7Z3Y8 459 aa10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 PIK3C2GO75747 1445 aa10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 SPATA31E1Q6ZUB1 1445 aa10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 MYOM2P54296 1465 aa10.72□□□□□ -0.69
TNFRSF11B-202ENST00000517352 TECPR2O15040 1411 aa10.71□□□□□ -0.69
TNFRSF11B-202ENST00000517352 BCL9LQ86UU0 1499 aa10.71□□□□□ -0.69
TNFRSF11B-202ENST00000517352 PXDNQ92626 1479 aa10.71□□□□□ -0.69
TNFRSF11B-202ENST00000517352 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
TNFRSF11B-202ENST00000517352 TNS3Q68CZ2 1445 aa10.7□□□□□ -0.7
TNFRSF11B-202ENST00000517352 BAG6P46379 1132 aa10.7□□□□□ -0.7
TNFRSF11B-202ENST00000517352 EVA1CP58658 441 aa10.7□□□□□ -0.7
TNFRSF11B-202ENST00000517352 FAM98CQ17RN3 349 aaKnown RBP10.7□□□□□ -0.7
TNFRSF11B-202ENST00000517352 DEFB132Q7Z7B7 95 aa10.69□□□□□ -0.7
TNFRSF11B-202ENST00000517352 STAC3Q96MF2 364 aa10.69□□□□□ -0.7
TNFRSF11B-202ENST00000517352 PRDM11Q9NQV5 511 aa10.69□□□□□ -0.7
TNFRSF11B-202ENST00000517352 PPLO60437 1756 aa10.69□□□□□ -0.7
TNFRSF11B-202ENST00000517352 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
TNFRSF11B-202ENST00000517352 RALGAPBQ86X10 1494 aa10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 BLMP54132 1417 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 SBNO1A3KN83 1393 aa10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 FAM83GA6ND36 823 aa10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 WASLO00401 505 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 STRN4Q9NRL3 753 aa10.68□□□□□ -0.7
TNFRSF11B-202ENST00000517352 RAB3GAP2Q9H2M9 1393 aa10.67□□□□□ -0.7
TNFRSF11B-202ENST00000517352 LAMC1P11047 1609 aa10.66□□□□□ -0.7
TNFRSF11B-202ENST00000517352 COL22A1Q8NFW1 1626 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-202ENST00000517352 ZBTB7CA1YPR0 619 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms