RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 FCF1Q9Y324 198 aaKnown RBP2.27□□□□□ -2.05
RNU6-542P-201ENST00000516405 SWT1Q5T5J6 900 aaKnown RBP2.26□□□□□ -2.05
RNU6-542P-201ENST00000516405 NECTIN2Q92692 538 aa2.26□□□□□ -2.05
RNU6-542P-201ENST00000516405 KRTAP9-7A8MTY7 169 aa2.25□□□□□ -2.05
RNU6-542P-201ENST00000516405 HDGFP51858 240 aaKnown RBP2.25□□□□□ -2.05
RNU6-542P-201ENST00000516405 BEND7Q8N7W2 519 aaPredicted RBP2.25□□□□□ -2.05
RNU6-542P-201ENST00000516405 PNMA3Q9UL41 463 aa2.25□□□□□ -2.05
RNU6-542P-201ENST00000516405 STK24Q9Y6E0 443 aa2.25□□□□□ -2.05
RNU6-542P-201ENST00000516405 PAX4O43316 350 aa2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 CELA2BP08218 269 aaPredicted RBP2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 JAG1P78504 1218 aa2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 SLF2Q8IX21 1173 aa2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 RBM33Q96EV2 1170 aaKnown RBP2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 CDCA7LQ96GN5 454 aa2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 PURBQ96QR8 312 aaKnown RBP2.24□□□□□ -2.05
RNU6-542P-201ENST00000516405 MAP3K9P80192 1104 aa2.23□□□□□ -2.05
RNU6-542P-201ENST00000516405 PPP1R15BQ5SWA1 713 aa2.23□□□□□ -2.05
RNU6-542P-201ENST00000516405 CSRNP3Q8WYN3 585 aa2.23□□□□□ -2.05
RNU6-542P-201ENST00000516405 PRR14Q9BWN1 585 aa2.23□□□□□ -2.05
RNU6-542P-201ENST00000516405 COL17A1Q9UMD9 1497 aaPredicted RBP2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 ADAMTS2O95450 1211 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 ALDH1A1P00352 501 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 COL8A1P27658 744 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 DOC2BQ14184 412 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 TSR1Q2NL82 804 aaKnown RBP2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 MRPL14Q6P1L8 145 aaKnown RBP2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 NUDT18Q6ZVK8 323 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 TRIM41Q8WV44 630 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 SPOCK2Q92563 424 aa2.22□□□□□ -2.05
RNU6-542P-201ENST00000516405 NBPF26B4DH59 902 aa2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 VASPP50552 380 aaPredicted RBP2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 PRSS12P56730 875 aa2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 MAP3K10Q02779 954 aa2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 NANOS1Q8WY41 292 aaKnown RBP2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 SPSB2Q99619 263 aa2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 EPAS1Q99814 870 aa2.21□□□□□ -2.06
RNU6-542P-201ENST00000516405 C1QTNF9BB2RNN3 333 aa2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 ACTN4O43707 911 aaKnown RBP2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 HYAL3O43820 417 aaPredicted RBP2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 MAN1A2O60476 641 aa2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 TRIM32Q13049 653 aa2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 SCUBE3Q8IX30 993 aa2.2□□□□□ -2.06
RNU6-542P-201ENST00000516405 ZBTB24O43167 697 aaPredicted RBP2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 PODNQ7Z5L7 613 aa2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 CD163Q86VB7 1156 aa2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 REPIN1Q9BWE0 567 aaKnown RBP2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 CRISPLD2Q9H0B8 497 aa2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 ENAMQ9NRM1 1142 aa2.19□□□□□ -2.06
RNU6-542P-201ENST00000516405 NR1I2O75469 434 aa2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 SKOR1P84550 965 aa2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 SCARF1Q14162 830 aa2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 RSPO4Q2I0M5 234 aaPredicted RBP2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 RC3H1Q5TC82 1133 aaKnown RBP2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 KRTAP9-3Q9BYQ3 159 aa2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 EMILIN3Q9NT22 766 aa2.18□□□□□ -2.06
RNU6-542P-201ENST00000516405 SIAH2O43255 324 aa2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 SNRPNP63162 240 aaKnown RBP2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 SRSF11Q05519 484 aaKnown RBP2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 LRP8Q14114 963 aa2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 IFNLR1Q8IU57 520 aaPredicted RBP2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 FAM160A2Q8N612 972 aaPredicted RBP2.17□□□□□ -2.06
RNU6-542P-201ENST00000516405 CHRNA4P43681 627 aa2.16□□□□□ -2.06
RNU6-542P-201ENST00000516405 NKAPLQ5M9Q1 402 aa2.16□□□□□ -2.06
RNU6-542P-201ENST00000516405 SH3RF1Q7Z6J0 888 aa2.16□□□□□ -2.06
RNU6-542P-201ENST00000516405 PRDM9Q9NQV7 894 aa2.16□□□□□ -2.06
RNU6-542P-201ENST00000516405 DNMT3LQ9UJW3 386 aa2.16□□□□□ -2.06
RNU6-542P-201ENST00000516405 STK25O00506 426 aa2.15□□□□□ -2.07
RNU6-542P-201ENST00000516405 EN1Q05925 392 aaPredicted RBP2.15□□□□□ -2.07
RNU6-542P-201ENST00000516405 VWA5B2Q8N398 1253 aa2.15□□□□□ -2.07
RNU6-542P-201ENST00000516405 NEDD1Q8NHV4 660 aa2.15□□□□□ -2.07
RNU6-542P-201ENST00000516405 FBXO3Q9UK99 471 aa2.15□□□□□ -2.07
RNU6-542P-201ENST00000516405 PTSQ03393 145 aa2.14□□□□□ -2.07
RNU6-542P-201ENST00000516405 PUS10Q3MIT2 529 aaKnown RBP2.14□□□□□ -2.07
RNU6-542P-201ENST00000516405 ALYREFQ86V81 257 aaKnown RBP2.14□□□□□ -2.07
RNU6-542P-201ENST00000516405 WASF2Q9Y6W5 498 aa2.14□□□□□ -2.07
RNU6-542P-201ENST00000516405 NCKAP5LQ9HCH0 1330 aa2.14□□□□□ -2.07
RNU6-542P-201ENST00000516405 MAP3K7O43318 606 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 CFHP08603 1231 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 GAS6Q14393 721 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 PRSS36Q5K4E3 855 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 DDX12PQ92771 950 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 THAP11Q96EK4 314 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 RNF114Q9Y508 228 aa2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 SOS2Q07890 1332 aaPredicted RBP2.13□□□□□ -2.07
RNU6-542P-201ENST00000516405 DYRK3O43781 588 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 BCRP11274 1271 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 TIMP2P16035 220 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 KMT5BQ4FZB7 885 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 C6orf118Q5T5N4 469 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 CCDC155Q8N6L0 562 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 SUV39H2Q9H5I1 410 aa2.12□□□□□ -2.07
RNU6-542P-201ENST00000516405 CDC14CA4D256 554 aa2.11□□□□□ -2.07
RNU6-542P-201ENST00000516405 SLC4A3P48751 1232 aa2.11□□□□□ -2.07
RNU6-542P-201ENST00000516405 SV2AQ7L0J3 742 aa2.11□□□□□ -2.07
RNU6-542P-201ENST00000516405 EYA1Q99502 592 aa2.11□□□□□ -2.07
RNU6-542P-201ENST00000516405 KLF16Q9BXK1 252 aaPredicted RBP2.11□□□□□ -2.07
RNU6-542P-201ENST00000516405 SLC10A3P09131 477 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 ITGA6P23229 1130 aa2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 PRIM1P49642 420 aaKnown RBP2.1□□□□□ -2.07
RNU6-542P-201ENST00000516405 WNT7BP56706 349 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms