RNA–Protein interactions for RNA: ENST00000516316.1

RNU6-1299P-201, Transcript of RNA, U6 small nuclear 1299, pseudogene, humanhuman

BASIC

Gene RNU6-1299P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1299P-201ENST00000516316 MINK1Q8N4C8 1332 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 KDM4AO75164 1064 aa4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 DXOO77932 396 aaKnown RBP4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 SMCPP49901 116 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 Q3C1V9 767 aa4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
RNU6-1299P-201ENST00000516316 WNT7AO00755 349 aa4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 MDM2Q00987 491 aaPredicted RBP4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 VSIG10Q8N0Z9 540 aa4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 CYP4X1Q8N118 509 aa4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 HLA-CQ95604 372 aa4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 USB1Q9BQ65 265 aaKnown RBP4.54□□□□□ -1.68
RNU6-1299P-201ENST00000516316 ZBTB24O43167 697 aaPredicted RBP4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 HOXA2O43364 376 aa4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 SMPD1P17405 629 aa4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 USP46P62068 366 aa4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 TRIM32Q13049 653 aa4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 CCDC102AQ96A19 550 aa4.53□□□□□ -1.68
RNU6-1299P-201ENST00000516316 AXIN1O15169 862 aa4.52□□□□□ -1.69
RNU6-1299P-201ENST00000516316 CTC1Q2NKJ3 1217 aa4.52□□□□□ -1.69
RNU6-1299P-201ENST00000516316 TREML4Q6UXN2 200 aa4.52□□□□□ -1.69
RNU6-1299P-201ENST00000516316 SNIP1Q8TAD8 396 aaKnown RBP4.52□□□□□ -1.69
RNU6-1299P-201ENST00000516316 FAM217BQ9NTX9 383 aaPredicted RBP4.52□□□□□ -1.69
RNU6-1299P-201ENST00000516316 TTC24A2A3L6 582 aaPredicted RBP4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 SKOR1P84550 965 aa4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 GUCA2AQ02747 115 aa4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 MRGPRX2Q96LB1 330 aa4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 REPIN1Q9BWE0 567 aaKnown RBP4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 GPCPD1Q9NPB8 672 aa4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 GMPR2Q9P2T1 348 aaKnown RBP4.51□□□□□ -1.69
RNU6-1299P-201ENST00000516316 J3QL48 77 aa4.5□□□□□ -1.69
RNU6-1299P-201ENST00000516316 TULP1O00294 542 aaPredicted RBP4.5□□□□□ -1.69
RNU6-1299P-201ENST00000516316 CLCN1P35523 988 aa4.5□□□□□ -1.69
RNU6-1299P-201ENST00000516316 SYMPKQ92797 1274 aaKnown RBP4.5□□□□□ -1.69
RNU6-1299P-201ENST00000516316 JUNDP17535 347 aa4.49□□□□□ -1.69
RNU6-1299P-201ENST00000516316 PCDHGC3Q9UN70 934 aa4.49□□□□□ -1.69
RNU6-1299P-201ENST00000516316 WNT7BP56706 349 aa4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 RC3H1Q5TC82 1133 aaKnown RBP4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 PTCRAQ6ISU1 281 aaPredicted RBP4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 RETREG3Q86VR2 466 aa4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 HPS1Q92902 700 aa4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 ATP13A2Q9NQ11 1180 aa4.48□□□□□ -1.69
RNU6-1299P-201ENST00000516316 C11orf95C9JLR9 678 aaPredicted RBP4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 SIAH2O43255 324 aa4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 NFX1Q12986 1120 aaKnown RBP4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 NUTM1Q86Y26 1132 aa4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 CCDC24Q8N4L8 307 aa4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 SPIRE2Q8WWL2 714 aa4.47□□□□□ -1.69
RNU6-1299P-201ENST00000516316 ZMYND10O75800 440 aa4.46□□□□□ -1.7
RNU6-1299P-201ENST00000516316 FDX1P10109 184 aa4.46□□□□□ -1.7
RNU6-1299P-201ENST00000516316 SSTR3P32745 418 aaPredicted RBP4.46□□□□□ -1.7
RNU6-1299P-201ENST00000516316 LCE2CQ5TA81 110 aa4.46□□□□□ -1.7
RNU6-1299P-201ENST00000516316 BARGINQ6ZT62 677 aa4.46□□□□□ -1.7
RNU6-1299P-201ENST00000516316 WFS1O76024 890 aa4.45□□□□□ -1.7
RNU6-1299P-201ENST00000516316 SNRPBP14678 240 aaKnown RBP4.45□□□□□ -1.7
RNU6-1299P-201ENST00000516316 TRIM47Q96LD4 638 aa4.45□□□□□ -1.7
RNU6-1299P-201ENST00000516316 NUDT12Q9BQG2 462 aa4.45□□□□□ -1.7
RNU6-1299P-201ENST00000516316 MOXD2PA6NHM9 499 aa4.44□□□□□ -1.7
RNU6-1299P-201ENST00000516316 NDUFV2P19404 249 aa4.44□□□□□ -1.7
RNU6-1299P-201ENST00000516316 SH3BP2P78314 561 aa4.44□□□□□ -1.7
RNU6-1299P-201ENST00000516316 AMHR2Q16671 573 aa4.44□□□□□ -1.7
RNU6-1299P-201ENST00000516316 EVA1BQ9NVM1 165 aa4.44□□□□□ -1.7
RNU6-1299P-201ENST00000516316 C6orf229H3BNL8 230 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 WIPF1O43516 503 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 ALDH1A1P00352 501 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 CCNYL3P0C7X3 344 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 MS4A1P11836 297 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 PTPRNQ16849 979 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 KRI1Q8N9T8 703 aaKnown RBP4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 ZC3H15Q8WU90 426 aaKnown RBP4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 SENP2Q9HC62 589 aa4.43□□□□□ -1.7
RNU6-1299P-201ENST00000516316 TERTO14746 1132 aaKnown RBP4.42□□□□□ -1.7
RNU6-1299P-201ENST00000516316 DESI1Q6ICB0 168 aa4.42□□□□□ -1.7
RNU6-1299P-201ENST00000516316 GIGYF2Q6Y7W6 1299 aaKnown RBP4.42□□□□□ -1.7
RNU6-1299P-201ENST00000516316 PRR7Q8TB68 274 aa4.42□□□□□ -1.7
RNU6-1299P-201ENST00000516316 GJA5P36382 358 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 KCNH2Q12809 1159 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 TRIM46Q7Z4K8 759 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 EHBP1Q8NDI1 1231 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 BAP1Q92560 729 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 KIFC2Q96AC6 838 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 UNC93B1Q9H1C4 597 aa4.41□□□□□ -1.7
RNU6-1299P-201ENST00000516316 SPDYE5A6NIY4 337 aa4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 MTMR2Q13614 643 aa4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TTLL12Q14166 644 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 RSBN1LQ6PCB5 846 aaPredicted RBP4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 MPNDQ8N594 471 aa4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 BEGAINQ9BUH8 593 aa4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 PCDHB15Q9Y5E8 787 aa4.4□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TRIM66O15016 1216 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 SPTLC1O15269 473 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 CAPN5O15484 640 aaPredicted RBP4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 LYPD8Q6UX82 237 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 PARP9Q8IXQ6 854 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 ZNF511Q8NB15 262 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 TBC1D2Q9BYX2 928 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 WASF2Q9Y6W5 498 aa4.39□□□□□ -1.71
RNU6-1299P-201ENST00000516316 CFAP99D6REC4 459 aa4.38□□□□□ -1.71
RNU6-1299P-201ENST00000516316 BMP1P13497 986 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms