RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 IL27Q8NEV9 243 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 HLA-CQ95604 372 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 THAP11Q96EK4 314 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 SPSB2Q99619 263 aa9.86□□□□□ -0.83
RN7SKP248-201ENST00000516278 RSBN1LQ6PCB5 846 aaPredicted RBP9.85□□□□□ -0.83
RN7SKP248-201ENST00000516278 NKX2-3Q8TAU0 364 aa9.85□□□□□ -0.83
RN7SKP248-201ENST00000516278 MYO15BQ96JP2 1530 aa9.85□□□□□ -0.83
RN7SKP248-201ENST00000516278 ADH1BP00325 375 aa9.84□□□□□ -0.83
RN7SKP248-201ENST00000516278 GUCA2AQ02747 115 aa9.84□□□□□ -0.83
RN7SKP248-201ENST00000516278 SKIV2LQ15477 1246 aaKnown RBP9.84□□□□□ -0.83
RN7SKP248-201ENST00000516278 TUSC1Q2TAM9 212 aa9.83□□□□□ -0.84
RN7SKP248-201ENST00000516278 SH3D19Q5HYK7 790 aa9.83□□□□□ -0.84
RN7SKP248-201ENST00000516278 PCDHGC3Q9UN70 934 aa9.83□□□□□ -0.84
RN7SKP248-201ENST00000516278 GOPCQ9HD26 462 aa9.82□□□□□ -0.84
RN7SKP248-201ENST00000516278 SPDYE5A6NIY4 337 aa9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 TLL1O43897 1013 aa9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 GGCXP38435 758 aa9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 CLK2P49760 499 aaKnown RBP9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 USB1Q9BQ65 265 aaKnown RBP9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 POLR3EQ9NVU0 708 aa9.81□□□□□ -0.84
RN7SKP248-201ENST00000516278 A0A0G2JS52 829 aa9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 C6orf229H3BNL8 230 aa9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 PRPF38BQ5VTL8 546 aaKnown RBP9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 SLC6A16Q9GZN6 736 aa9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 LIMD1Q9UGP4 676 aa9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 PCDHB15Q9Y5E8 787 aa9.8□□□□□ -0.84
RN7SKP248-201ENST00000516278 MSS51Q4VC12 460 aa9.79□□□□□ -0.84
RN7SKP248-201ENST00000516278 PPP1R18Q6NYC8 613 aa9.79□□□□□ -0.84
RN7SKP248-201ENST00000516278 RETREG3Q86VR2 466 aa9.79□□□□□ -0.84
RN7SKP248-201ENST00000516278 FAM160A2Q8N612 972 aaPredicted RBP9.79□□□□□ -0.84
RN7SKP248-201ENST00000516278 MTMR2Q13614 643 aa9.78□□□□□ -0.84
RN7SKP248-201ENST00000516278 SYMPKQ92797 1274 aaKnown RBP9.78□□□□□ -0.84
RN7SKP248-201ENST00000516278 ZBTB3Q9H5J0 574 aa9.78□□□□□ -0.84
RN7SKP248-201ENST00000516278 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.78□□□□□ -0.84
RN7SKP248-201ENST00000516278 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
RN7SKP248-201ENST00000516278 TTBK1Q5TCY1 1321 aaPredicted RBP9.77□□□□□ -0.85
RN7SKP248-201ENST00000516278 CENPBP07199 599 aaPredicted RBP9.76□□□□□ -0.85
RN7SKP248-201ENST00000516278 CSPP1Q1MSJ5 1256 aa9.76□□□□□ -0.85
RN7SKP248-201ENST00000516278 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 LILRB3O75022 631 aa9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 S1PR4O95977 384 aa9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 PCMTD1Q96MG8 357 aaPredicted RBP9.75□□□□□ -0.85
RN7SKP248-201ENST00000516278 PROCA1Q8NCQ7 364 aaPredicted RBP9.74□□□□□ -0.85
RN7SKP248-201ENST00000516278 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.74□□□□□ -0.85
RN7SKP248-201ENST00000516278 RNF223E7ERA6 249 aa9.73□□□□□ -0.85
RN7SKP248-201ENST00000516278 MMP16P51512 607 aa9.73□□□□□ -0.85
RN7SKP248-201ENST00000516278 QPCTQ16769 361 aa9.73□□□□□ -0.85
RN7SKP248-201ENST00000516278 PPARGC1BQ86YN6 1023 aaKnown RBP9.73□□□□□ -0.85
RN7SKP248-201ENST00000516278 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
RN7SKP248-201ENST00000516278 DESI1Q6ICB0 168 aa9.72□□□□□ -0.85
RN7SKP248-201ENST00000516278 ANKLE1Q8NAG6 615 aa9.72□□□□□ -0.85
RN7SKP248-201ENST00000516278 CABLES1Q8TDN4 633 aa9.72□□□□□ -0.85
RN7SKP248-201ENST00000516278 RGS20O76081 388 aa9.71□□□□□ -0.86
RN7SKP248-201ENST00000516278 DXOO77932 396 aaKnown RBP9.71□□□□□ -0.86
RN7SKP248-201ENST00000516278 JUNDP17535 347 aa9.71□□□□□ -0.86
RN7SKP248-201ENST00000516278 PPP2R2DQ66LE6 453 aa9.7□□□□□ -0.86
RN7SKP248-201ENST00000516278 PRDM9Q9NQV7 894 aa9.7□□□□□ -0.86
RN7SKP248-201ENST00000516278 PPEF1O14829 653 aaPredicted RBP9.69□□□□□ -0.86
RN7SKP248-201ENST00000516278 RTL5Q5HYW3 569 aaPredicted RBP9.69□□□□□ -0.86
RN7SKP248-201ENST00000516278 CFAP99D6REC4 459 aa9.68□□□□□ -0.86
RN7SKP248-201ENST00000516278 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
RN7SKP248-201ENST00000516278 HELBQ8NG08 1087 aaPredicted RBP9.66□□□□□ -0.86
RN7SKP248-201ENST00000516278 FCF1Q9Y324 198 aaKnown RBP9.66□□□□□ -0.86
RN7SKP248-201ENST00000516278 PTPRNQ16849 979 aa9.65□□□□□ -0.86
RN7SKP248-201ENST00000516278 LYPD8Q6UX82 237 aa9.65□□□□□ -0.86
RN7SKP248-201ENST00000516278 TSC1Q92574 1164 aa9.64□□□□□ -0.87
RN7SKP248-201ENST00000516278 ACIN1Q9UKV3 1341 aaKnown RBP9.63□□□□□ -0.87
RN7SKP248-201ENST00000516278 FBXO31Q5XUX0 539 aaPredicted RBP9.63□□□□□ -0.87
RN7SKP248-201ENST00000516278 NUDT12Q9BQG2 462 aa9.63□□□□□ -0.87
RN7SKP248-201ENST00000516278 V9GY48 417 aaPredicted RBP9.63□□□□□ -0.87
RN7SKP248-201ENST00000516278 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 CCNYL3P0C7X3 344 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 RFC5P40937 340 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 SLC19A1P41440 591 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 CCDC24Q8N4L8 307 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 PRKD2Q9BZL6 878 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 EVA1BQ9NVM1 165 aa9.62□□□□□ -0.87
RN7SKP248-201ENST00000516278 ZBTB24O43167 697 aaPredicted RBP9.61□□□□□ -0.87
RN7SKP248-201ENST00000516278 RPIAP49247 311 aa9.61□□□□□ -0.87
RN7SKP248-201ENST00000516278 PLA2G2CQ5R387 149 aa9.6□□□□□ -0.87
RN7SKP248-201ENST00000516278 AP1G2O75843 785 aa9.59□□□□□ -0.87
RN7SKP248-201ENST00000516278 CD2BP2O95400 341 aaKnown RBP9.59□□□□□ -0.87
RN7SKP248-201ENST00000516278 CTDSPL2Q05D32 466 aa9.59□□□□□ -0.87
RN7SKP248-201ENST00000516278 LIAT1Q6ZQX7 453 aa9.59□□□□□ -0.87
RN7SKP248-201ENST00000516278 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
RN7SKP248-201ENST00000516278 KCNH2Q12809 1159 aa9.58□□□□□ -0.88
RN7SKP248-201ENST00000516278 EMID1Q96A84 441 aaPredicted RBP9.57□□□□□ -0.88
RN7SKP248-201ENST00000516278 CTHP32929 405 aa9.56□□□□□ -0.88
RN7SKP248-201ENST00000516278 SPRYD7Q5W111 196 aa9.56□□□□□ -0.88
RN7SKP248-201ENST00000516278 BANK1Q8NDB2 785 aa9.56□□□□□ -0.88
RN7SKP248-201ENST00000516278 F12P00748 615 aaPredicted RBP9.55□□□□□ -0.88
RN7SKP248-201ENST00000516278 PTCRAQ6ISU1 281 aaPredicted RBP9.55□□□□□ -0.88
RN7SKP248-201ENST00000516278 ABCC9O60706 1549 aa9.55□□□□□ -0.88
RN7SKP248-201ENST00000516278 ZNF598Q86UK7 904 aaKnown RBP9.54□□□□□ -0.88
RN7SKP248-201ENST00000516278 LOC105371045A0A1W2PR82 267 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms