RNA–Protein interactions for RNA: ENST00000515996.1

SCARNA21.1-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 128 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.1-201ENST00000515996 HDGFP51858 240 aaKnown RBP2.16□□□□□ -2.06
SCARNA21.1-201ENST00000515996 COL17A1Q9UMD9 1497 aaPredicted RBP2.15□□□□□ -2.06
SCARNA21.1-201ENST00000515996 KRTAP9-7A8MTY7 169 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 PHF14O94880 888 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ADAMTS2O95450 1211 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 CELA2BP08218 269 aaPredicted RBP2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 LRP8Q14114 963 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 SLF2Q8IX21 1173 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ENAMQ9NRM1 1142 aa2.15□□□□□ -2.07
SCARNA21.1-201ENST00000515996 RIOK3O14730 519 aaKnown RBP2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 VGFO15240 615 aaPredicted RBP2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 MAN1A2O60476 641 aa2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 PPP1R37O75864 691 aa2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 DOC2BQ14184 412 aa2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 PURBQ96QR8 312 aaKnown RBP2.14□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ALDH1A1P00352 501 aa2.13□□□□□ -2.07
SCARNA21.1-201ENST00000515996 SWT1Q5T5J6 900 aaKnown RBP2.13□□□□□ -2.07
SCARNA21.1-201ENST00000515996 MRPL14Q6P1L8 145 aaKnown RBP2.13□□□□□ -2.07
SCARNA21.1-201ENST00000515996 REPIN1Q9BWE0 567 aaKnown RBP2.13□□□□□ -2.07
SCARNA21.1-201ENST00000515996 FAM198AQ9UFP1 575 aa2.13□□□□□ -2.07
SCARNA21.1-201ENST00000515996 C1QTNF9BB2RNN3 333 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 NBPF26B4DH59 902 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 HYAL3O43820 417 aaPredicted RBP2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 COL8A1P27658 744 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 SCARF1Q14162 830 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 TATDN2Q93075 761 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 RNF25Q96BH1 459 aaPredicted RBP2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 KRTAP9-3Q9BYQ3 159 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 BCL11BQ9C0K0 894 aaPredicted RBP2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 PNMA3Q9UL41 463 aa2.12□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ZBTB24O43167 697 aaPredicted RBP2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 TRIM32Q13049 653 aa2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ALYREFQ86V81 257 aaKnown RBP2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 CD163Q86VB7 1156 aa2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 NEDD1Q8NHV4 660 aa2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 NANOS1Q8WY41 292 aaKnown RBP2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 RBM33Q96EV2 1170 aaKnown RBP2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 RNF114Q9Y508 228 aa2.11□□□□□ -2.07
SCARNA21.1-201ENST00000515996 CDCA7LQ96GN5 454 aa2.1□□□□□ -2.07
SCARNA21.1-201ENST00000515996 NR1I2O75469 434 aa2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 CHRNA4P43681 627 aa2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 SRSF11Q05519 484 aaKnown RBP2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 TRIM41Q8WV44 630 aa2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 SPSB2Q99619 263 aa2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 STK24Q9Y6E0 443 aa2.09□□□□□ -2.07
SCARNA21.1-201ENST00000515996 ACTN4O43707 911 aaKnown RBP2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PSPNO60542 156 aa2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SLC4A3P48751 1232 aa2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 RSPO4Q2I0M5 234 aaPredicted RBP2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PPP1R15BQ5SWA1 713 aa2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 EPAS1Q99814 870 aa2.08□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PRSS12P56730 875 aa2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 MAP3K9P80192 1104 aa2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 RC3H1Q5TC82 1133 aaKnown RBP2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 NUDT18Q6ZVK8 323 aa2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SH3RF1Q7Z6J0 888 aa2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 WASF2Q9Y6W5 498 aa2.07□□□□□ -2.08
SCARNA21.1-201ENST00000515996 DYRK3O43781 588 aa2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SNRPNP63162 240 aaKnown RBP2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 GRIN2CQ14957 1233 aa2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 TSR1Q2NL82 804 aaKnown RBP2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PRSS36Q5K4E3 855 aa2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 NKAPLQ5M9Q1 402 aa2.06□□□□□ -2.08
SCARNA21.1-201ENST00000515996 CDC14CA4D256 554 aa2.05□□□□□ -2.08
SCARNA21.1-201ENST00000515996 FBLN7Q53RD9 439 aa2.05□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SCUBE3Q8IX30 993 aa2.05□□□□□ -2.08
SCARNA21.1-201ENST00000515996 VWA5B2Q8N398 1253 aa2.05□□□□□ -2.08
SCARNA21.1-201ENST00000515996 DNMT3LQ9UJW3 386 aa2.05□□□□□ -2.08
SCARNA21.1-201ENST00000515996 BCRP11274 1271 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SKOR1P84550 965 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PTSQ03393 145 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 KMT5BQ4FZB7 885 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 C6orf118Q5T5N4 469 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SPOCK2Q92563 424 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 PRDM9Q9NQV7 894 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 JAG2Q9Y219 1238 aa2.04□□□□□ -2.08
SCARNA21.1-201ENST00000515996 TAL1P17542 331 aaPredicted RBP2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 VASPP50552 380 aaPredicted RBP2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 IRAK1P51617 712 aa2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 SV2AQ7L0J3 742 aa2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 LSRQ86X29 649 aaPredicted RBP2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 MKL2Q9ULH7 1088 aa2.03□□□□□ -2.08
SCARNA21.1-201ENST00000515996 NCANO14594 1321 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 MAP3K7O43318 606 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 CFHP08603 1231 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 GAS6Q14393 721 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 CCDC155Q8N6L0 562 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 SUV39H2Q9H5I1 410 aa2.02□□□□□ -2.09
SCARNA21.1-201ENST00000515996 PRRG2O14669 202 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 SIAH2O43255 324 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 ELNP15502 786 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 TIMP2P16035 220 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 ITGA6P23229 1130 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 GATA4P43694 442 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 SPOCD1Q6ZMY3 1216 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 FAM160A2Q8N612 972 aaPredicted RBP2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 CRISPLD2Q9H0B8 497 aa2.01□□□□□ -2.09
SCARNA21.1-201ENST00000515996 SOS2Q07890 1332 aaPredicted RBP2□□□□□ -2.09
SCARNA21.1-201ENST00000515996 STK25O00506 426 aa2□□□□□ -2.09
SCARNA21.1-201ENST00000515996 WNT7BP56706 349 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms